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The map label for this gene is yhjB [C]

Identifier: 94314565

GI number: 94314565

Start: 2407831

End: 2408526

Strand: Direct

Name: yhjB [C]

Synonym: Rmet_5646

Alternate gene names: 94314565

Gene position: 2407831-2408526 (Clockwise)

Preceding gene: 94314564

Following gene: 94314567

Centisome position: 93.32

GC content: 64.08

Gene sequence:

>696_bases
ATGAGGGCAACGGTGGTCGAATTTCGCCCGCTGGTCGGGCTTGGCATCCAGCGGATTCTCAATCGTATTGCAGACGTGGA
CGACAGCAGCGTCATCACGCCACGGCCAGAGACCCCGTGTTCTCTGCACGGTACCGAGTTACTGGTACTTGGCGCCTTGC
CGCGCGGCGCCAATATCGACATGCACCAGTTGCTGGAAACCGCATCGGCCGTGCGCTGCGTGCTGTTCCTGGCGCATGGC
GGCGAAGTCCAATGGATGCCGCCCAACCCGTTCGCGCCGCTATTGTCGTGGCTGCCCGAACACGCGAGCGCCGTTGAGAT
CGAATGTGCGCTACGCGCCTTGATCGCCTGCGCGCATGCCGGAATTCACGCGCTGGCGCCAGCGCTGCCGATTGCGCCGG
CTACCCCGATTGCCGTGCCAACGCCGGTAGGCGTCCACGGCAGCACGCGGGTGCCGGCATACATTTGCGAAGCGCGGCTG
CTCAGGCTGACCCTGCGCCAGTACGAGGTGCTCGTACTGCTGTCGCGGGGACTCTCGGTGAAGTCCATCAGCAGGCAACT
ACGTATCTCCGTCCCGACCGTGAAAAGCCATACGTTGCAGCTCTATCGGCGACTCGCAGCCAAGAACAAGTCGGAGGCGG
TCTTCATGGCGCGCGCGAAGGGCGCCGCACTGGCAACCGTCTCGTCCGATCCATGA

Upstream 100 bases:

>100_bases
TGGCGCGCCGGCGCGGCTTTTACGTGCCTGCGCGTATGGAATGCTTCTTGCGGTCTGATTGCTCGCAGTCAAATAACTAC
AGAAACAAAGGGGAGCAATC

Downstream 100 bases:

>100_bases
CACCCGCTACCGTTACCGCTCAACCGATGACATGCAGGCCATGCGTCACGGATACACGACCAGCATCGGCCTGGCGTGAC
GATGCGAAGCCGGCAGAACG

Product: putative LuxR family transcriptional regulator

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; Response Regulator; LuxR Family Regulatory Protein; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family; Transcription Regulator Protein; Negative Regulator Of Exopolysaccharide Production Protein; Transcription Regulator LuxR Family

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRATVVEFRPLVGLGIQRILNRIADVDDSSVITPRPETPCSLHGTELLVLGALPRGANIDMHQLLETASAVRCVLFLAHG
GEVQWMPPNPFAPLLSWLPEHASAVEIECALRALIACAHAGIHALAPALPIAPATPIAVPTPVGVHGSTRVPAYICEARL
LRLTLRQYEVLVLLSRGLSVKSISRQLRISVPTVKSHTLQLYRRLAAKNKSEAVFMARAKGAALATVSSDP

Sequences:

>Translated_231_residues
MRATVVEFRPLVGLGIQRILNRIADVDDSSVITPRPETPCSLHGTELLVLGALPRGANIDMHQLLETASAVRCVLFLAHG
GEVQWMPPNPFAPLLSWLPEHASAVEIECALRALIACAHAGIHALAPALPIAPATPIAVPTPVGVHGSTRVPAYICEARL
LRLTLRQYEVLVLLSRGLSVKSISRQLRISVPTVKSHTLQLYRRLAAKNKSEAVFMARAKGAALATVSSDP
>Mature_231_residues
MRATVVEFRPLVGLGIQRILNRIADVDDSSVITPRPETPCSLHGTELLVLGALPRGANIDMHQLLETASAVRCVLFLAHG
GEVQWMPPNPFAPLLSWLPEHASAVEIECALRALIACAHAGIHALAPALPIAPATPIAVPTPVGVHGSTRVPAYICEARL
LRLTLRQYEVLVLLSRGLSVKSISRQLRISVPTVKSHTLQLYRRLAAKNKSEAVFMARAKGAALATVSSDP

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24793; Mature: 24793

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATVVEFRPLVGLGIQRILNRIADVDDSSVITPRPETPCSLHGTELLVLGALPRGANID
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCC
MHQLLETASAVRCVLFLAHGGEVQWMPPNPFAPLLSWLPEHASAVEIECALRALIACAHA
HHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHC
GIHALAPALPIAPATPIAVPTPVGVHGSTRVPAYICEARLLRLTLRQYEVLVLLSRGLSV
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KSISRQLRISVPTVKSHTLQLYRRLAAKNKSEAVFMARAKGAALATVSSDP
HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC
>Mature Secondary Structure
MRATVVEFRPLVGLGIQRILNRIADVDDSSVITPRPETPCSLHGTELLVLGALPRGANID
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCC
MHQLLETASAVRCVLFLAHGGEVQWMPPNPFAPLLSWLPEHASAVEIECALRALIACAHA
HHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHC
GIHALAPALPIAPATPIAVPTPVGVHGSTRVPAYICEARLLRLTLRQYEVLVLLSRGLSV
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KSISRQLRISVPTVKSHTLQLYRRLAAKNKSEAVFMARAKGAALATVSSDP
HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA