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The map label for this gene is fliD3 [H]

Identifier: 94314561

GI number: 94314561

Start: 2402526

End: 2403989

Strand: Reverse

Name: fliD3 [H]

Synonym: Rmet_5642

Alternate gene names: 94314561

Gene position: 2403989-2402526 (Counterclockwise)

Preceding gene: 94314562

Following gene: 94314559

Centisome position: 93.17

GC content: 62.16

Gene sequence:

>1464_bases
ATGGCTGCACTCGATTTCCTCGGCATTGGCTCCAACATGCAACTGGGCACGCTCCTCGATCAGCTGGCGACGGCGGAACG
CCTGCCGCTGAAGGCGCTGGAGACCCAGAATACGGCCTACCAGGCCAAGCTATCCGGATATGGCACGATCAAGAGCATGT
TGTCGGCCTTTCAGGCTTCCGCCAACTCGCTTGCCAAGCTCGACACGTTCGGCGCCGTCAAGGCGCAAGTCAGTAACAGC
GATGTGATGACCGTCGCCACTGGCGTCAATGCGATTGCCGGCAACTACAACGTAAACGTCAAGAGCCTGGCGCAGGCCCA
ATCCCTGGCGGGCGCTGGCCAGCTCAAGCAGGATGCGATCATCGGCACTGGCACGCTGACCTTCGAGTTCGGCGTGACGG
GCGGATACGACGCCGACCCGGCATCGCCGACGTACGGCACATACGTGAACCCGACGTTCACGCCAACCGCCGACTCCGCC
AAGACCGTGACGATCGACAGCAGCAACCAGACGCTGCAAGGAATTCGTGATGCGATCAACAAGGCCAATATGGGCGTCAA
GGCCAGCATCATCAACGACGGCAGCGGCACGCCTTATCGTCTGGTGCTCAATTCGGAGAAGACCGGCGAGGCGATGAGCA
TGCGCATCACTGGTTCCTCACCGGAACTGCAGGCGCTTGCCGGATACGATCCGGTGGCCGGCCCGCAACCCGGCGGCATG
AAGGAAGTGGTGCGTGCCACGAATGCGCAACTGACTATCAACGATATCGCCATCACCAGCGCCAGCAATGTGGTGACCGA
TGCCGCGCAGGGCGTCACGATGACGCTCAAGAAGACGGGCACCACGTCGATGACGCTGACGCAGGATCTCGACAGCATCA
AGGCCGCGGTGCAGGGGCTGGCCACGGCCTACAACAACCTCCAGTCGGCCACCAAGCAGCTGACAGCCTTCGACGTGAAG
AGCGGTACCAAGGCGGCTCTGACCGGTGACGGCGTGCTGCGCGGTATCCAGTCGACGCTGCGCTCGGTACTCAACACCCC
CGAAGCCGGGATGCGCGATGGCGCCGCGACAACGCTGGCCCAGCTTGGCGTGACGTTGCAGAAGGACGGCACGATGTCGG
TGGACACCAAGAAGCTGGATGCCGCGTTGGCCGGAAACCTGGCTGACGTGACCGCGCTGTTCGGCGGCGACGGCACGAAG
GGTGGGATCGCGCGCCGCTTGTCTGAAGCGGTGGATACCATGACGGGTACCAACGGCCCGCTGACCTCCGCGACCAAGGG
TATCGAGCAGAGCGTGAAGGATCTCGGCAAGCGCTATGACTCGATGTCGGAGCACATCGATGCCAATATCAAGCGCGTCC
AGAAGCAGTTCCAGGCGCTGGATCTGGCAGTCTCGCAGATGAACCGCACCAAGGACTACCTGACCCAGCAGTTCTCGGCG
ATGAACAACACGAACAGCAAGTAA

Upstream 100 bases:

>100_bases
GAGCCACTTTCGAGCGCCGTAAACCTTGGATGTAAAGACATTCATTTGCCTGTCTGGGTGAATTACATCGAAGTTACGCA
CGGCGAAGGACCTGAAGAAA

Downstream 100 bases:

>100_bases
CCTGTCAGCGAGTCGTCAATCGATGCAAGAACGCCGCCCTCGTGGGCGGCGTTTTTTTGTTACGAGGAAGCGGGCGGGGT
TTAGTCGTCAGCATGTTCCA

Product: Flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQASANSLAKLDTFGAVKAQVSNS
DVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAIIGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSA
KTVTIDSSNQTLQGIRDAINKANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPELQALAGYDPVAGPQPGGM
KEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKKTGTTSMTLTQDLDSIKAAVQGLATAYNNLQSATKQLTAFDVK
SGTKAALTGDGVLRGIQSTLRSVLNTPEAGMRDGAATTLAQLGVTLQKDGTMSVDTKKLDAALAGNLADVTALFGGDGTK
GGIARRLSEAVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNRTKDYLTQQFSA
MNNTNSK

Sequences:

>Translated_487_residues
MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQASANSLAKLDTFGAVKAQVSNS
DVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAIIGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSA
KTVTIDSSNQTLQGIRDAINKANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPELQALAGYDPVAGPQPGGM
KEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKKTGTTSMTLTQDLDSIKAAVQGLATAYNNLQSATKQLTAFDVK
SGTKAALTGDGVLRGIQSTLRSVLNTPEAGMRDGAATTLAQLGVTLQKDGTMSVDTKKLDAALAGNLADVTALFGGDGTK
GGIARRLSEAVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNRTKDYLTQQFSA
MNNTNSK
>Mature_486_residues
AALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQASANSLAKLDTFGAVKAQVSNSD
VMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAIIGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAK
TVTIDSSNQTLQGIRDAINKANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPELQALAGYDPVAGPQPGGMK
EVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKKTGTTSMTLTQDLDSIKAAVQGLATAYNNLQSATKQLTAFDVKS
GTKAALTGDGVLRGIQSTLRSVLNTPEAGMRDGAATTLAQLGVTLQKDGTMSVDTKKLDAALAGNLADVTALFGGDGTKG
GIARRLSEAVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNRTKDYLTQQFSAM
NNTNSK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=499, Percent_Identity=36.6733466933868, Blast_Score=259, Evalue=3e-70,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50548; Mature: 50416

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQAS
CCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
ANSLAKLDTFGAVKAQVSNSDVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAI
HHHHHHHHHHHHEEEEECCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEE
IGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAKTVTIDSSNQTLQGIRDAIN
EECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
KANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPELQALAGYDPVAGPQPGGM
HCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCH
KEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKKTGTTSMTLTQDLDSIKAAVQGL
HHHHHHCCCEEEEEEEEEECCCHHHHHCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH
ATAYNNLQSATKQLTAFDVKSGTKAALTGDGVLRGIQSTLRSVLNTPEAGMRDGAATTLA
HHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
QLGVTLQKDGTMSVDTKKLDAALAGNLADVTALFGGDGTKGGIARRLSEAVDTMTGTNGP
HHCCEEECCCCCCCCHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC
LTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNRTKDYLTQQFSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNNTNSK
HCCCCCC
>Mature Secondary Structure 
AALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQAS
CCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
ANSLAKLDTFGAVKAQVSNSDVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAI
HHHHHHHHHHHHEEEEECCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEE
IGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAKTVTIDSSNQTLQGIRDAIN
EECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
KANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPELQALAGYDPVAGPQPGGM
HCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCH
KEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKKTGTTSMTLTQDLDSIKAAVQGL
HHHHHHCCCEEEEEEEEEECCCHHHHHCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH
ATAYNNLQSATKQLTAFDVKSGTKAALTGDGVLRGIQSTLRSVLNTPEAGMRDGAATTLA
HHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
QLGVTLQKDGTMSVDTKKLDAALAGNLADVTALFGGDGTKGGIARRLSEAVDTMTGTNGP
HHCCEEECCCCCCCCHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC
LTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNRTKDYLTQQFSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNNTNSK
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]