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The map label for this gene is tctC

Identifier: 94314548

GI number: 94314548

Start: 2385012

End: 2386013

Strand: Reverse

Name: tctC

Synonym: Rmet_5629

Alternate gene names: NA

Gene position: 2386013-2385012 (Counterclockwise)

Preceding gene: 94314549

Following gene: 94314547

Centisome position: 92.48

GC content: 62.28

Gene sequence:

>1002_bases
ATGACGTTGCGTTATGCCGCACGCGCGCTCGCGTGCGCTTCGTTGCTAGGTGTTGCGTGGGCCAGCCCCGCGTTCGCGTG
GGAGCCTACCAAACCGGTCGAGGTTGTCGTGCCGTTCAGCGCGGGCGGGGCATCGGATCAGATGGCGCGTTCGATTCAGG
GCATCATCGCCAAGCACAAGCTGATGAACCAGCCGATGATCGTCGTGAACAAGGCCGGCGCCAGCGGGGCCGAAGGGCTG
ATGGACACCAAAGCGTCGAAAGGTGACGCGCACAAGCTGCTGGTGACCTCGTCCGCGCTCTACACGGTGCCGATGATCAG
CCAGTTGCCCTTTAACTGGCGCGACCTGACGCCGGTGGCCATGGTGGCGATGGACGAGTTCGTGCTCTGGACCAACGCCG
AGGCGCCGTACAAGACGCCGGCAGACTACATTGCCGAGGCGAAGAAGCAGCCGGGCAAGCTCAAGATGGGCGGCACCAGC
TCCAAGCGCGAGGACCAGATCATCACCGCGCAGGTCGAGCGCAAGGCCGGCGTGCGCTTCATCTACATCCCGTACAAGGG
CGGTGGTGAAGCGGCGACCCAGCTCTCGGGCAAGCATATCGACTCCAACGTCAACAACCCCTCCGAATCGATCGGTCAGT
GGCGCGCCGGCGAGCATCGCGCGCTGTGCGTGTTTGCGCCAGATCGCATGCAGTACACGAACAAGATCACCGGCACGCAA
AGCTGGGGTGACATCCCCACCTGCAAGGAGCAGGGGCTGGACGTGCAATACCAGATGCTGCGTGTGTTCATGCTGCCCGG
CGGTGTCACGCCAGATCAGCAGAAGTACTACGTGGATCTGATGCAGAAGGTGGTGGCCACGCCGGAGTGGAAGGAGTATC
TGGAGAAGAACGCGCTCAAGAACGATTTCCTCACGGGCCAGAAGTTGACCGAGTTCCTGACGGCCGATGAAACGCGCCAC
AAGGACATCATCAAGGAAGCGGGTTTCCTGGCGGCGAAGTAA

Upstream 100 bases:

>100_bases
TTTCAAGCAGCAGCAAGAAGAGAGCGTCCAGCAGAGGCGCTCCCGACTACAAGGCCGATGCACCACAGAGCGCACGGCCG
CCACCCAAAGGAGACAGACC

Downstream 100 bases:

>100_bases
GACCGCAGAGCGAGTGCTGATGGCTTGCCCCCTCTCCCATGAATGGGATGGGGGGCAACGATCCGGGGGGACACATTCAT
GAGCGAACAATTACATGACA

Product: periplasmic tricarboxylate binding receptor (TctC)

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTLRYAARALACASLLGVAWASPAFAWEPTKPVEVVVPFSAGGASDQMARSIQGIIAKHKLMNQPMIVVNKAGASGAEGL
MDTKASKGDAHKLLVTSSALYTVPMISQLPFNWRDLTPVAMVAMDEFVLWTNAEAPYKTPADYIAEAKKQPGKLKMGGTS
SKREDQIITAQVERKAGVRFIYIPYKGGGEAATQLSGKHIDSNVNNPSESIGQWRAGEHRALCVFAPDRMQYTNKITGTQ
SWGDIPTCKEQGLDVQYQMLRVFMLPGGVTPDQQKYYVDLMQKVVATPEWKEYLEKNALKNDFLTGQKLTEFLTADETRH
KDIIKEAGFLAAK

Sequences:

>Translated_333_residues
MTLRYAARALACASLLGVAWASPAFAWEPTKPVEVVVPFSAGGASDQMARSIQGIIAKHKLMNQPMIVVNKAGASGAEGL
MDTKASKGDAHKLLVTSSALYTVPMISQLPFNWRDLTPVAMVAMDEFVLWTNAEAPYKTPADYIAEAKKQPGKLKMGGTS
SKREDQIITAQVERKAGVRFIYIPYKGGGEAATQLSGKHIDSNVNNPSESIGQWRAGEHRALCVFAPDRMQYTNKITGTQ
SWGDIPTCKEQGLDVQYQMLRVFMLPGGVTPDQQKYYVDLMQKVVATPEWKEYLEKNALKNDFLTGQKLTEFLTADETRH
KDIIKEAGFLAAK
>Mature_332_residues
TLRYAARALACASLLGVAWASPAFAWEPTKPVEVVVPFSAGGASDQMARSIQGIIAKHKLMNQPMIVVNKAGASGAEGLM
DTKASKGDAHKLLVTSSALYTVPMISQLPFNWRDLTPVAMVAMDEFVLWTNAEAPYKTPADYIAEAKKQPGKLKMGGTSS
KREDQIITAQVERKAGVRFIYIPYKGGGEAATQLSGKHIDSNVNNPSESIGQWRAGEHRALCVFAPDRMQYTNKITGTQS
WGDIPTCKEQGLDVQYQMLRVFMLPGGVTPDQQKYYVDLMQKVVATPEWKEYLEKNALKNDFLTGQKLTEFLTADETRHK
DIIKEAGFLAAK

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 36607; Mature: 36476

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRYAARALACASLLGVAWASPAFAWEPTKPVEVVVPFSAGGASDQMARSIQGIIAKHK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
LMNQPMIVVNKAGASGAEGLMDTKASKGDAHKLLVTSSALYTVPMISQLPFNWRDLTPVA
HCCCCEEEEECCCCCCCCCHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
MVAMDEFVLWTNAEAPYKTPADYIAEAKKQPGKLKMGGTSSKREDQIITAQVERKAGVRF
HHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEHHHCCCEE
IYIPYKGGGEAATQLSGKHIDSNVNNPSESIGQWRAGEHRALCVFAPDRMQYTNKITGTQ
EEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCC
SWGDIPTCKEQGLDVQYQMLRVFMLPGGVTPDQQKYYVDLMQKVVATPEWKEYLEKNALK
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NDFLTGQKLTEFLTADETRHKDIIKEAGFLAAK
HHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLRYAARALACASLLGVAWASPAFAWEPTKPVEVVVPFSAGGASDQMARSIQGIIAKHK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
LMNQPMIVVNKAGASGAEGLMDTKASKGDAHKLLVTSSALYTVPMISQLPFNWRDLTPVA
HCCCCEEEEECCCCCCCCCHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
MVAMDEFVLWTNAEAPYKTPADYIAEAKKQPGKLKMGGTSSKREDQIITAQVERKAGVRF
HHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEHHHCCCEE
IYIPYKGGGEAATQLSGKHIDSNVNNPSESIGQWRAGEHRALCVFAPDRMQYTNKITGTQ
EEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCC
SWGDIPTCKEQGLDVQYQMLRVFMLPGGVTPDQQKYYVDLMQKVVATPEWKEYLEKNALK
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NDFLTGQKLTEFLTADETRHKDIIKEAGFLAAK
HHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]