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The map label for this gene is 94314481

Identifier: 94314481

GI number: 94314481

Start: 2315252

End: 2315566

Strand: Reverse

Name: 94314481

Synonym: Rmet_5562

Alternate gene names: NA

Gene position: 2315566-2315252 (Counterclockwise)

Preceding gene: 94314483

Following gene: 291481587

Centisome position: 89.75

GC content: 60.0

Gene sequence:

>315_bases
ATGGCAACCTACAAGCAACTGCTCGCCCAAAAGGAAGCACTGGAAGCTCAACTCGCCGAAGTCCGTGCCACTGAAGTGGC
TGGCGTCATTGAGCAGATCCGCACTCTGATGGAGCAATACGGCTTGTCCGTCGAAGACATCCAAGGCAAGCGCCGTCGCG
GTCGACCCGCCGGAGGCGGCGTTGCTAAGGCAGCCAAGGAACCGTTGCCTCCAAAGTATCGCGACCCGAAGACCGGTAAG
ACCTGGTCGGGCCGGGGTAGGGCGCCGGCATGGTTGGGCAAGAACCCGAATCGGTTCTTGGTTGCCGAAGAATAA

Upstream 100 bases:

>100_bases
AACCTTTGGCGATTTCTCAATCGCTTTCGAAACACGGTCGGAGGCTGTTAAGCTAGGTGTGCCAACGCTAGTTGACAAAC
CAACAAGGAGAACAACCACA

Downstream 100 bases:

>100_bases
CTGCCGCATTCGCCATGGCGAAACACCCAATGCCCGTCGGATGGCTGCGCCATGGCAACCAACCAATTGAATGCGGGTCA
GTCGCGTTTCAGGCCGAATT

Product: histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Histone Family Protein Nucleoid-Structuring Protein H-NS; Hns-Like Protein; H-NS Histone-Like Protein; H-NS-Like Protein; H-NS-Like Proteins; H-NS Histone Family Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MATYKQLLAQKEALEAQLAEVRATEVAGVIEQIRTLMEQYGLSVEDIQGKRRRGRPAGGGVAKAAKEPLPPKYRDPKTGK
TWSGRGRAPAWLGKNPNRFLVAEE

Sequences:

>Translated_104_residues
MATYKQLLAQKEALEAQLAEVRATEVAGVIEQIRTLMEQYGLSVEDIQGKRRRGRPAGGGVAKAAKEPLPPKYRDPKTGK
TWSGRGRAPAWLGKNPNRFLVAEE
>Mature_103_residues
ATYKQLLAQKEALEAQLAEVRATEVAGVIEQIRTLMEQYGLSVEDIQGKRRRGRPAGGGVAKAAKEPLPPKYRDPKTGKT
WSGRGRAPAWLGKNPNRFLVAEE

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11458; Mature: 11327

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYKQLLAQKEALEAQLAEVRATEVAGVIEQIRTLMEQYGLSVEDIQGKRRRGRPAGGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCCC
VAKAAKEPLPPKYRDPKTGKTWSGRGRAPAWLGKNPNRFLVAEE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
ATYKQLLAQKEALEAQLAEVRATEVAGVIEQIRTLMEQYGLSVEDIQGKRRRGRPAGGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCCC
VAKAAKEPLPPKYRDPKTGKTWSGRGRAPAWLGKNPNRFLVAEE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA