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The map label for this gene is vanA [H]

Identifier: 94314465

GI number: 94314465

Start: 2292700

End: 2293743

Strand: Reverse

Name: vanA [H]

Synonym: Rmet_5546

Alternate gene names: 94314465

Gene position: 2293743-2292700 (Counterclockwise)

Preceding gene: 94314466

Following gene: 94314464

Centisome position: 88.9

GC content: 56.03

Gene sequence:

>1044_bases
ATGTACCTCAAAAACGCCTGGTATGTGGCCGGCTGGAATTCGGAATTTCAAAAGGACCAGCTGGTTTCCCGTCGACTTCT
CGGTCAAGACATCGTGTTCTATCGTCGCGGTGATGGATCAGTTGCCGCGCTGGAGGACAGGTGTTGTCATCGCGCCGCGC
CGTTGTCCAAAGGGCAGCAGGAAGGTGACCAAATCCGCTGCATGTATCACGGTCTTCTGTTCAACTGCGCGGGCCAATGC
GTGGAGGTTCCTGGGCAGGAGCGGATCTCCGACAAACTCAAGGTCCGCAGTTTTCCGACAGAAGTTCGGGACAATCTTGT
CTGGATCTGGATGGGGCAGCCAGAGCTGGCTGACGCTTCGGAAATCAAGCAGGTGCATTGGCACAATCGTGAGGGATGGC
GTGTCGAGGAGGGCGGATATCTCCGTTATGCCTCGGGCGTCCAGTTGATTGTTGACAATCTGCTGGATTTCTCGCATTTG
GGCTTCGTTCACAACAAGTCCATCGGCACGCGTAAGCAAGGGAATATCCGTCCGGAGACCGAGTTCCAGGGCGAAACGGT
GTCGGTCAGATTCACAACGCTAGGCAGTCCGCCCCCGGCTTTTGCTCGAGAACTCGGTCAGTTGCCGGAGAACGTAGATC
GCTTTAACTACTACGTTTGGCACATCCGGGGAAATCTCTTCGTGCAGGACTCGGTCATCGCTCCGGTAGGGGAGGGATAT
GAGAGCCTTGATCCCGCCACCATGAAGCTGCACACGTTCATTGCTTTGACGCCATGCGACGAAAACACTGCCCACTACTT
CTGGGCGACAGCTCACAACAATTTTACGTCGACAACCGAGGATTTGACACGCCGTCTGACAGAGCAGGTCGCCCACGCTT
TTGATGAAGATCGAGAAATTATCGAGGCACAACAGGCGGTTATTTCGACGGCACCTGATGCGCCGATGGTCGCCATTGCC
GCAGACGGCACTCTGCTGAAGGTACGCCGCATGCTGGACGCCCTCCTGCTGGAAGAACGTTCGCCCAAAGCGGCGACGCA
ATAA

Upstream 100 bases:

>100_bases
GGCAGACAGTGTTTGAGCGAACGCATAGAGTGAGTTGGACCTCAACAAAAGCGCAAAGCGCAGCCGAATCTGCTGCCGTG
CGACATAAGGAGACAACTCT

Downstream 100 bases:

>100_bases
GCGGAGGAACGACATGAAGAGCTACGACATCGTGGAGTGGGGCAAGCCTCTCCAGGAGGTTCTGCGAGACAGACCAAAGC
CGGTCGGTACTGAGGTTCTC

Product: putative vanillate O-demethylase oxygenase subunit (4-hydroxy- 3-methoxybenzoate demethylase)

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MYLKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQEGDQIRCMYHGLLFNCAGQC
VEVPGQERISDKLKVRSFPTEVRDNLVWIWMGQPELADASEIKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHL
GFVHNKSIGTRKQGNIRPETEFQGETVSVRFTTLGSPPPAFARELGQLPENVDRFNYYVWHIRGNLFVQDSVIAPVGEGY
ESLDPATMKLHTFIALTPCDENTAHYFWATAHNNFTSTTEDLTRRLTEQVAHAFDEDREIIEAQQAVISTAPDAPMVAIA
ADGTLLKVRRMLDALLLEERSPKAATQ

Sequences:

>Translated_347_residues
MYLKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQEGDQIRCMYHGLLFNCAGQC
VEVPGQERISDKLKVRSFPTEVRDNLVWIWMGQPELADASEIKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHL
GFVHNKSIGTRKQGNIRPETEFQGETVSVRFTTLGSPPPAFARELGQLPENVDRFNYYVWHIRGNLFVQDSVIAPVGEGY
ESLDPATMKLHTFIALTPCDENTAHYFWATAHNNFTSTTEDLTRRLTEQVAHAFDEDREIIEAQQAVISTAPDAPMVAIA
ADGTLLKVRRMLDALLLEERSPKAATQ
>Mature_347_residues
MYLKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQEGDQIRCMYHGLLFNCAGQC
VEVPGQERISDKLKVRSFPTEVRDNLVWIWMGQPELADASEIKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHL
GFVHNKSIGTRKQGNIRPETEFQGETVSVRFTTLGSPPPAFARELGQLPENVDRFNYYVWHIRGNLFVQDSVIAPVGEGY
ESLDPATMKLHTFIALTPCDENTAHYFWATAHNNFTSTTEDLTRRLTEQVAHAFDEDREIIEAQQAVISTAPDAPMVAIA
ADGTLLKVRRMLDALLLEERSPKAATQ

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=184, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 39311; Mature: 39311

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQ
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCC
EGDQIRCMYHGLLFNCAGQCVEVPGQERISDKLKVRSFPTEVRDNLVWIWMGQPELADAS
CCCEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCHH
EIKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHLGFVHNKSIGTRKQGNIRPET
HHHHHHCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC
EFQGETVSVRFTTLGSPPPAFARELGQLPENVDRFNYYVWHIRGNLFVQDSVIAPVGEGY
CCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCEEEECCEECCCCCCC
ESLDPATMKLHTFIALTPCDENTAHYFWATAHNNFTSTTEDLTRRLTEQVAHAFDEDREI
CCCCCHHEEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IEAQQAVISTAPDAPMVAIAADGTLLKVRRMLDALLLEERSPKAATQ
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYLKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQ
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCC
EGDQIRCMYHGLLFNCAGQCVEVPGQERISDKLKVRSFPTEVRDNLVWIWMGQPELADAS
CCCEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCHH
EIKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHLGFVHNKSIGTRKQGNIRPET
HHHHHHCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC
EFQGETVSVRFTTLGSPPPAFARELGQLPENVDRFNYYVWHIRGNLFVQDSVIAPVGEGY
CCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCEEEECCEECCCCCCC
ESLDPATMKLHTFIALTPCDENTAHYFWATAHNNFTSTTEDLTRRLTEQVAHAFDEDREI
CCCCCHHEEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IEAQQAVISTAPDAPMVAIAADGTLLKVRRMLDALLLEERSPKAATQ
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]