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The map label for this gene is tnpA

Identifier: 94314461

GI number: 94314461

Start: 2288026

End: 2288364

Strand: Reverse

Name: tnpA

Synonym: Rmet_5542

Alternate gene names: NA

Gene position: 2288364-2288026 (Counterclockwise)

Preceding gene: 94314462

Following gene: 94314460

Centisome position: 88.69

GC content: 65.19

Gene sequence:

>339_bases
ATGCGAGCCATGAGCAAGAACAACGCAAACAAGTTTTCCCCGGAAGTGCGCGAGCGCGCCGTGCGCCTGGTGCAGGAGTC
GCGCGGCGAGTACCCGTCGCTGTGGGTGGCGGTCGAGTCCATCGCGCCCAAGATCGGCTGCTCGGCGCAGACGCTGCTGA
CCTGGGTCAAGCGCCACGAAGTCGACAGCGGACAGCGCGAAGGCGTCACCACCAGCGAGCGAGAACGCATCAAGGAGTTG
GAGCGGGAGAACCGAGAGCTGCGCCGCGCCAACGACATCCTGCGCACTGCCAGCGCTTTTTTCGCGCAGGCGGAGCTCGA
CCGCAAGCTGAAGTCGTAA

Upstream 100 bases:

>100_bases
GTTTGGTGCGAAGTAGGTTCGACTCAACCACGGATATGACCAGAAACGTAGCAATTATTGAATCGCCCCGGGTTTTGCGG
AGGCTCTCACTCTTGAGAGA

Downstream 100 bases:

>100_bases
ACACCTACATCGACCGGCACCGGGAGGTTTACGGGGTCGAGCCGATCTGCAAGGTGTTGCAGGTTGCCTCGTCGGCCTAT
CGGCGCCATGCCGCACGGCT

Product: transposase DNA binding site ISRme15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRAMSKNNANKFSPEVRERAVRLVQESRGEYPSLWVAVESIAPKIGCSAQTLLTWVKRHEVDSGQREGVTTSERERIKEL
ERENRELRRANDILRTASAFFAQAELDRKLKS

Sequences:

>Translated_112_residues
MRAMSKNNANKFSPEVRERAVRLVQESRGEYPSLWVAVESIAPKIGCSAQTLLTWVKRHEVDSGQREGVTTSERERIKEL
ERENRELRRANDILRTASAFFAQAELDRKLKS
>Mature_112_residues
MRAMSKNNANKFSPEVRERAVRLVQESRGEYPSLWVAVESIAPKIGCSAQTLLTWVKRHEVDSGQREGVTTSERERIKEL
ERENRELRRANDILRTASAFFAQAELDRKLKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 12916; Mature: 12916

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMSKNNANKFSPEVRERAVRLVQESRGEYPSLWVAVESIAPKIGCSAQTLLTWVKRHE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VDSGQREGVTTSERERIKELERENRELRRANDILRTASAFFAQAELDRKLKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAMSKNNANKFSPEVRERAVRLVQESRGEYPSLWVAVESIAPKIGCSAQTLLTWVKRHE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VDSGQREGVTTSERERIKELERENRELRRANDILRTASAFFAQAELDRKLKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]