| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314386
Identifier: 94314386
GI number: 94314386
Start: 2211962
End: 2213122
Strand: Reverse
Name: 94314386
Synonym: Rmet_5467
Alternate gene names: NA
Gene position: 2213122-2211962 (Counterclockwise)
Preceding gene: 94314387
Following gene: 94314385
Centisome position: 85.78
GC content: 54.78
Gene sequence:
>1161_bases TTGCCGGCGGCGATAGCCGAGACTTGCTTCTTTGTTTCTAGCGATAACACCAAGAAGGCGTTCACAGAAATGGAACTGAC AGGAAAAACAGTCTGGCAGCAAGCGGCGGGCGACACGAATCGAAATTACGTGGACATCTGTTTGAACTGGGATGTAATTC TAAACGGACCAGGTTATGCCGGTCCCATGCCGGATGCAAAAGAGACCCTTTTGAAGGACGACTGGTCACCGCGGAAAGTC ACCGACCTACGACGTTTTTCAAGTGATATGCGACCCGGCGACATCGTTGTACTCCGTCTTGGAACGAGCCAAGTGCATGG GGTAGGCGAAGTAGTCGGTCCGTACGAATGGCACGACGAATTCGGCGATATTGACGGCTGGGACCTTCAGCATGTGCGTC GAGTGAAGTGGCTATGGAGGCCAGTCGGCGGCCCCAAGACTTTTCCAGCTTATGCCCTGAATCAGGGAGATACGACGCAG CGATTAAGCAATGGTCCGGTCTTCGATTGGCTCAAGACGCTCACGCTCTCGCCAAGCGGGGATTCAACTGCACCGAAGCC CTTACCCAATGTCTCACACCGCGAGATCTCTCTGTCAGAGATTTCTTCATTCTTGTTCGATCACGGTGTAGCAAGTGCTT CAATTTCGAACCTTCTAGCAGAGATCGGCGAACTCATGCGAATCGGCCATTGGTACAAGCGGTCTAAGATGCCATCCGAG CATGAAACAGTGGCTTATCTCGTTGTTCCGCTTATGCGCGCACTGGGCTGGACGCCGCAGCGTATGGCGGTGGAATGGAA CCGTGTCGACTTGGCGCTCTTTGAGCGCCTGCCACGAGAAGACAAGAATCTGTGTGCGGTTGTTGAAGCAAAGAAGATGG ACGATTCATGTCTGACGGCTATGTCACAGGCGCTGGGATACGCACAGACCAGGTCAGAATGTCACCGCCTAATCGTGACG GACGGCATGCGTTTTGGTGTCTACACGCGGCCAGGCGGAGGGGAGTTCAAGCTACATGCTTACCTCAACTTGACCAGGTT GCGTGACGAGTACCCTGTGTACCAATGTGGTGGGGCCCGCCAGGCGCTACTCGCACTTGCTCCTGAGTGGAAGCCTACGT CGGCGCTCCCTTCTGGCGGCCAAGTGGAAGAAGTCGCATAG
Upstream 100 bases:
>100_bases CCAATCGATACCTCGCTAAGCGCACGACTATAAAGGGTCTTGTCGCATTAACTGAGGCAGCTGAAGAGTTCGATGATCTC GAGAAACTGTCAGATGCATT
Downstream 100 bases:
>100_bases GCCAATCGTCTATCGAGTTTCGCCAGCTTAAACATCGAAACCCATGCGGATATGGTCTCGGGTCCAGAGTAAGAAACGGC CCATACCCAGCACTTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPAAIAETCFFVSSDNTKKAFTEMELTGKTVWQQAAGDTNRNYVDICLNWDVILNGPGYAGPMPDAKETLLKDDWSPRKV TDLRRFSSDMRPGDIVVLRLGTSQVHGVGEVVGPYEWHDEFGDIDGWDLQHVRRVKWLWRPVGGPKTFPAYALNQGDTTQ RLSNGPVFDWLKTLTLSPSGDSTAPKPLPNVSHREISLSEISSFLFDHGVASASISNLLAEIGELMRIGHWYKRSKMPSE HETVAYLVVPLMRALGWTPQRMAVEWNRVDLALFERLPREDKNLCAVVEAKKMDDSCLTAMSQALGYAQTRSECHRLIVT DGMRFGVYTRPGGGEFKLHAYLNLTRLRDEYPVYQCGGARQALLALAPEWKPTSALPSGGQVEEVA
Sequences:
>Translated_386_residues MPAAIAETCFFVSSDNTKKAFTEMELTGKTVWQQAAGDTNRNYVDICLNWDVILNGPGYAGPMPDAKETLLKDDWSPRKV TDLRRFSSDMRPGDIVVLRLGTSQVHGVGEVVGPYEWHDEFGDIDGWDLQHVRRVKWLWRPVGGPKTFPAYALNQGDTTQ RLSNGPVFDWLKTLTLSPSGDSTAPKPLPNVSHREISLSEISSFLFDHGVASASISNLLAEIGELMRIGHWYKRSKMPSE HETVAYLVVPLMRALGWTPQRMAVEWNRVDLALFERLPREDKNLCAVVEAKKMDDSCLTAMSQALGYAQTRSECHRLIVT DGMRFGVYTRPGGGEFKLHAYLNLTRLRDEYPVYQCGGARQALLALAPEWKPTSALPSGGQVEEVA >Mature_385_residues PAAIAETCFFVSSDNTKKAFTEMELTGKTVWQQAAGDTNRNYVDICLNWDVILNGPGYAGPMPDAKETLLKDDWSPRKVT DLRRFSSDMRPGDIVVLRLGTSQVHGVGEVVGPYEWHDEFGDIDGWDLQHVRRVKWLWRPVGGPKTFPAYALNQGDTTQR LSNGPVFDWLKTLTLSPSGDSTAPKPLPNVSHREISLSEISSFLFDHGVASASISNLLAEIGELMRIGHWYKRSKMPSEH ETVAYLVVPLMRALGWTPQRMAVEWNRVDLALFERLPREDKNLCAVVEAKKMDDSCLTAMSQALGYAQTRSECHRLIVTD GMRFGVYTRPGGGEFKLHAYLNLTRLRDEYPVYQCGGARQALLALAPEWKPTSALPSGGQVEEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43099; Mature: 42968
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAIAETCFFVSSDNTKKAFTEMELTGKTVWQQAAGDTNRNYVDICLNWDVILNGPGYA CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCC GPMPDAKETLLKDDWSPRKVTDLRRFSSDMRPGDIVVLRLGTSQVHGVGEVVGPYEWHDE CCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCHHHCCCCHHHHH FGDIDGWDLQHVRRVKWLWRPVGGPKTFPAYALNQGDTTQRLSNGPVFDWLKTLTLSPSG HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHCCCCCC DSTAPKPLPNVSHREISLSEISSFLFDHGVASASISNLLAEIGELMRIGHWYKRSKMPSE CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HETVAYLVVPLMRALGWTPQRMAVEWNRVDLALFERLPREDKNLCAVVEAKKMDDSCLTA HHHHHHHHHHHHHHHCCCCHHHEEEECHHHHHHHHHCCCCCCCEEEEEEHHCCCHHHHHH MSQALGYAQTRSECHRLIVTDGMRFGVYTRPGGGEFKLHAYLNLTRLRDEYPVYQCGGAR HHHHHHHHHHHHHHHEEEEECCCEECEEECCCCCCEEEEEEEEEEHHHCCCCCEECCCHH QALLALAPEWKPTSALPSGGQVEEVA HHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAAIAETCFFVSSDNTKKAFTEMELTGKTVWQQAAGDTNRNYVDICLNWDVILNGPGYA CCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCC GPMPDAKETLLKDDWSPRKVTDLRRFSSDMRPGDIVVLRLGTSQVHGVGEVVGPYEWHDE CCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCHHHCCCCHHHHH FGDIDGWDLQHVRRVKWLWRPVGGPKTFPAYALNQGDTTQRLSNGPVFDWLKTLTLSPSG HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHCCCCCC DSTAPKPLPNVSHREISLSEISSFLFDHGVASASISNLLAEIGELMRIGHWYKRSKMPSE CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HETVAYLVVPLMRALGWTPQRMAVEWNRVDLALFERLPREDKNLCAVVEAKKMDDSCLTA HHHHHHHHHHHHHHHCCCCHHHEEEECHHHHHHHHHCCCCCCCEEEEEEHHCCCHHHHHH MSQALGYAQTRSECHRLIVTDGMRFGVYTRPGGGEFKLHAYLNLTRLRDEYPVYQCGGAR HHHHHHHHHHHHHHHEEEEECCCEECEEECCCCCCEEEEEEEEEEHHHCCCCCEECCCHH QALLALAPEWKPTSALPSGGQVEEVA HHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA