| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314380
Identifier: 94314380
GI number: 94314380
Start: 2208843
End: 2209337
Strand: Direct
Name: 94314380
Synonym: Rmet_5461
Alternate gene names: NA
Gene position: 2208843-2209337 (Clockwise)
Preceding gene: 291481571
Following gene: 291481572
Centisome position: 85.61
GC content: 52.32
Gene sequence:
>495_bases TTGGCTACGCGCACTGCACGAGGAGTGCTTGCGCGCAAGGACTTCTCTTTTGCCCAACTAGCCGAACGCATCTCCGTTGA TGGAATGCCTGAATCCCTGCGCGGAACGGAGAGCAAAATCCATCGAGGCACCTATAGCCTTGCCTTCTTTCTGGCAATGC TTGATGTCGTTGGAGCGGAATACCCTACGCAATGGACAAAATTCATTGATTCGAATAAGTCCTGGGAAAATGCTGCCAAA CATGTCTTCCTCCATGAGATGAAAGCCCATGGGCTGAGCGTCAAGGACCTATCCGACCGACTTGAAGAACTAGGCATATC GCTTAAGCCAGAAAAGGTCGAAGCGCAGCTCGCGAATGGAGAGCTTCCATTCACGGCGTTTTTGCAATTGGCGCTGGTAG TGCCAGTCTCAGAGTTCACGCGATTCGTTGATCGCAATGACCTGCTGGAAGCTGCAGGCGACAGGGAATTCAGCGCTTTC CAAGGAAAGCCCTGA
Upstream 100 bases:
>100_bases GTTTCTCTCGACGCACTGCATCCTGAGAGGGGCTGGACTGTTGCCCCATGAAACTGCAAGAGGATCCGAGTTGGCGCACA CGAATACTCCATGGTCGAGA
Downstream 100 bases:
>100_bases GCGTCTATTCCGGGAGCTTCGCACGGGCTGAAACACCGCCCAAAGATATGGCTCACATGGTGAGCAGATGGATAGAGCCC GGTCTATGCCGAGCATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>_residues
Sequences:
>Translated_164_residues MATRTARGVLARKDFSFAQLAERISVDGMPESLRGTESKIHRGTYSLAFFLAMLDVVGAEYPTQWTKFIDSNKSWENAAK HVFLHEMKAHGLSVKDLSDRLEELGISLKPEKVEAQLANGELPFTAFLQLALVVPVSEFTRFVDRNDLLEAAGDREFSAF QGKP >Mature_163_residues ATRTARGVLARKDFSFAQLAERISVDGMPESLRGTESKIHRGTYSLAFFLAMLDVVGAEYPTQWTKFIDSNKSWENAAKH VFLHEMKAHGLSVKDLSDRLEELGISLKPEKVEAQLANGELPFTAFLQLALVVPVSEFTRFVDRNDLLEAAGDREFSAFQ GKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18320; Mature: 18189
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRTARGVLARKDFSFAQLAERISVDGMPESLRGTESKIHRGTYSLAFFLAMLDVVGAE CCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC YPTQWTKFIDSNKSWENAAKHVFLHEMKAHGLSVKDLSDRLEELGISLKPEKVEAQLANG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC ELPFTAFLQLALVVPVSEFTRFVDRNDLLEAAGDREFSAFQGKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ATRTARGVLARKDFSFAQLAERISVDGMPESLRGTESKIHRGTYSLAFFLAMLDVVGAE CCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC YPTQWTKFIDSNKSWENAAKHVFLHEMKAHGLSVKDLSDRLEELGISLKPEKVEAQLANG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC ELPFTAFLQLALVVPVSEFTRFVDRNDLLEAAGDREFSAFQGKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA