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The map label for this gene is glpP [H]

Identifier: 94314361

GI number: 94314361

Start: 2191256

End: 2191846

Strand: Reverse

Name: glpP [H]

Synonym: Rmet_5442

Alternate gene names: 94314361

Gene position: 2191846-2191256 (Counterclockwise)

Preceding gene: 94314362

Following gene: 94314360

Centisome position: 84.95

GC content: 62.27

Gene sequence:

>591_bases
ATGGACAGGTCTCTCGGCGCCCGCCTGACACGACACCCTGTAATCGCCACGCTGTACGGCGCGGACCAGATCGATGCCTT
CATCGACAGCGAGGCGGAAGTCTCGATTGTCGCCAACGTGGAACTGCGGCGGCTGCAGCCCGTGATTGCCACGCTGACGA
AGGCCGGCAAGTACGTGATCGTCAATATCGATAGCTGCGAAGGGCTGTCGCAGGACAAGGGCGGCGTCGAGTACCTGGCC
GACATCGGCGTCACCAGTCTGGTGTCGACGCGCGTGGCCACCATCCAGCGTGCCAATCGCGCCGGGATGATGACCATGCA
GAAGGTCTTCGTGACCGACCGGTCAACGTGGCCACGCAGCGTCAAGGCGCTGGAACAGAGCGATGCGAACCTGGTTCAGT
TGATGCCGGCGCCAATGCTGCAGCACCTGCCCGGGTCCGTTCGCAAAGGGCTGCCGCCCATTGTGGCGTCCGGCTTTGTC
AGCACCCAGGACGATATCCGCAGTGCCATCGCCCATGATGCGCTTGCGGTATCGACCAGCGATCAGCGCTTGTGGGCATG
TGATCCGCAAGCCAAGACAATCAGGAAATAA

Upstream 100 bases:

>100_bases
GCTGGTGGCAGTGAAGCGGGCACTTGATCCGCAAAACATCCTCAATCCGGGCAAGCTCGGCCTTTCGGACGTGCTGCCCC
ACGAAGTGAAGAAGTAAGCC

Downstream 100 bases:

>100_bases
TCCCTTGACCACCTCCTATCTGCAGGTCATCGCGCACTACCACGCGAAGCCGGGCAACGGCGACCAGGTGTCGCGGCTTC
TGGCCGAGTTGGCCGAGGCC

Product: glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDRSLGARLTRHPVIATLYGADQIDAFIDSEAEVSIVANVELRRLQPVIATLTKAGKYVIVNIDSCEGLSQDKGGVEYLA
DIGVTSLVSTRVATIQRANRAGMMTMQKVFVTDRSTWPRSVKALEQSDANLVQLMPAPMLQHLPGSVRKGLPPIVASGFV
STQDDIRSAIAHDALAVSTSDQRLWACDPQAKTIRK

Sequences:

>Translated_196_residues
MDRSLGARLTRHPVIATLYGADQIDAFIDSEAEVSIVANVELRRLQPVIATLTKAGKYVIVNIDSCEGLSQDKGGVEYLA
DIGVTSLVSTRVATIQRANRAGMMTMQKVFVTDRSTWPRSVKALEQSDANLVQLMPAPMLQHLPGSVRKGLPPIVASGFV
STQDDIRSAIAHDALAVSTSDQRLWACDPQAKTIRK
>Mature_196_residues
MDRSLGARLTRHPVIATLYGADQIDAFIDSEAEVSIVANVELRRLQPVIATLTKAGKYVIVNIDSCEGLSQDKGGVEYLA
DIGVTSLVSTRVATIQRANRAGMMTMQKVFVTDRSTWPRSVKALEQSDANLVQLMPAPMLQHLPGSVRKGLPPIVASGFV
STQDDIRSAIAHDALAVSTSDQRLWACDPQAKTIRK

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=178, Percent_Identity=24.7191011235955, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 21242; Mature: 21242

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSLGARLTRHPVIATLYGADQIDAFIDSEAEVSIVANVELRRLQPVIATLTKAGKYVI
CCCCCCCHHHCCCEEEEEECCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEE
VNIDSCEGLSQDKGGVEYLADIGVTSLVSTRVATIQRANRAGMMTMQKVFVTDRSTWPRS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
VKALEQSDANLVQLMPAPMLQHLPGSVRKGLPPIVASGFVSTQDDIRSAIAHDALAVSTS
HHHHHHCCCCEEEECCCHHHHHCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHEEEECC
DQRLWACDPQAKTIRK
CCEEEEECCCHHHCCC
>Mature Secondary Structure
MDRSLGARLTRHPVIATLYGADQIDAFIDSEAEVSIVANVELRRLQPVIATLTKAGKYVI
CCCCCCCHHHCCCEEEEEECCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEE
VNIDSCEGLSQDKGGVEYLADIGVTSLVSTRVATIQRANRAGMMTMQKVFVTDRSTWPRS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
VKALEQSDANLVQLMPAPMLQHLPGSVRKGLPPIVASGFVSTQDDIRSAIAHDALAVSTS
HHHHHHCCCCEEEECCCHHHHHCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHEEEECC
DQRLWACDPQAKTIRK
CCEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]