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The map label for this gene is 94314327

Identifier: 94314327

GI number: 94314327

Start: 2148663

End: 2150183

Strand: Direct

Name: 94314327

Synonym: Rmet_5408

Alternate gene names: NA

Gene position: 2148663-2150183 (Clockwise)

Preceding gene: 94314326

Following gene: 94314328

Centisome position: 83.28

GC content: 64.43

Gene sequence:

>1521_bases
ATGCGAAAAAGTAGCCAGCCCCTAGCCATCGCACTTGCTGCCACGCTGCTGACCACCGCCTGCTCCACAGCGCCTAGCGT
GCCCCAGCCCTACTCGAAGGAGGAAGTACGCCAGCGCGTGGAAGAAGATCGGCGCGGCATGTACAGCGACCAGGAACCCG
TCACCCGCCCGATCACGTTCTACGAAGCCGCCGCGCGCGCGCTCAAGTACAACCTCGACTATCGCCTCAAGCTGATGGAG
AGCACGTTGTCGCGGCAGCTTGTGGACGTGACCAAGCACGACATGCTGCCGAAGCTCGTGGCATCCGCTGGCTACACGCA
TCGGTCGAACGACTCGGGAGGTGTCTCGGTGGGGATCCAGGACGGTCAGATCAGCCTGCGGCCCTCCACCTCCGAACAGC
GTTACCACCGTCTGGCCGATCTCGACCTGACGTGGAGCACGCTGGATTTCCTGGTGGCCTACGAACGGACCCAGCAAAAG
GCCGATCAGGTGCTGATGGCCGAGGAGCGCCGTCGCAAGGTCGTGCAGAACGTGCTGCAGGATGTCCGCAATGCCTACTG
GCGCGCGCTTGGCGCGCAACGTCTGATCGGCCAGGTCGACGCATTGCTGAACAAGGTTCGCCAGGGTCTGAAGGCCGCGC
AGGAAGCCGACGAAAAGGGCCTGCTGCCGCGCCAGCAGGCGCTGGCCTATCAGCGCGCGCTGCTCGATGCCGTCAGCCTG
CTGTCGGCGCGGCGTCAGGACCTGGAACTGGCGCGCGCGGAACTGGCCGCCCTGATGTCGCTGCCGCCGGACCAGCCTTT
CACGCTTGCCGACGAGGCCGAGCAGCGCATGCCGAACGATCGGTTTGACGTCGCCGGGTTGGAACAGATGGCGCTCGAAA
GCCGGCCGGAGATCATGGAAGAGTGGTACCGCAAGCGCGTCACCGACAACGACATCAAGATCGCCAAGGCCGAACTGTGG
CCCAGCCTGTCCGTCGACCTGGGCGGCCACTACGACTCGAACGCCTACCTCTACAACAACGCGTGGTCCGCGATCGGCCT
GCGCCTGTCGTACAACATCTTCAACCTGCTCAAGATCCCCGTGCTCAACGAGGCGCAGGACAGCCAGAACAAGGTAGGCG
ACCTGCGCCGCATGTCGCTGTCCATGGCCGTGCTCACGCAGGTGCGCGTGGCGCTGCAACGCTACCACCTGGCACTCGAG
CAGCTCGATTTCGCCGAGGAAAGCCTGCAGGTTGACAACCGCCTGCGCAGATTCGCCGAGGCCAGCGCCCAGGTATCGGC
CGACTCGAGACTCGAGTTCATCCGTGCCGATGCGCGCATGTTGCTGGCGCAATACCAGCGCTACGCCGCCTACTCGGAGG
CGCAGGCCGCCTGGGGACGTCTCTACAACTCGGTTGGCCTCGACGTCATGCCGGACGCGATCGCCAGCCATGACGTCCCG
ACCCTCGCATCGGAGATCGAACAGACCATGCAGGGCTGGCAACAGAAGCTCTACCCAAGCGCCGTCGATAGCAAATCATG
A

Upstream 100 bases:

>100_bases
GCGCGCCCCGCAGCCTCCTTCACCGATCAAATCCGCCAACTGGCGTCGCGGCCCAGCACGGTGGCCGCCCTGTCCCACGC
CAACAACAGCACCAACGAAG

Downstream 100 bases:

>100_bases
GCAACGCATCATCTCGCTTTTCGTTCCGTCTTTCCGGTCTTTCCGGTCTTTCCGGTCTTTCCGGGCTTGCTGGTCTCGCC
GTTGTCTCGGCCGCCCTGTT

Product: putative efflux outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Efflux Outer Membrane Protein; Outer Membrane Protein-Like; Outer Membrane Efflux Protein Superfamily

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRKSSQPLAIALAATLLTTACSTAPSVPQPYSKEEVRQRVEEDRRGMYSDQEPVTRPITFYEAAARALKYNLDYRLKLME
STLSRQLVDVTKHDMLPKLVASAGYTHRSNDSGGVSVGIQDGQISLRPSTSEQRYHRLADLDLTWSTLDFLVAYERTQQK
ADQVLMAEERRRKVVQNVLQDVRNAYWRALGAQRLIGQVDALLNKVRQGLKAAQEADEKGLLPRQQALAYQRALLDAVSL
LSARRQDLELARAELAALMSLPPDQPFTLADEAEQRMPNDRFDVAGLEQMALESRPEIMEEWYRKRVTDNDIKIAKAELW
PSLSVDLGGHYDSNAYLYNNAWSAIGLRLSYNIFNLLKIPVLNEAQDSQNKVGDLRRMSLSMAVLTQVRVALQRYHLALE
QLDFAEESLQVDNRLRRFAEASAQVSADSRLEFIRADARMLLAQYQRYAAYSEAQAAWGRLYNSVGLDVMPDAIASHDVP
TLASEIEQTMQGWQQKLYPSAVDSKS

Sequences:

>Translated_506_residues
MRKSSQPLAIALAATLLTTACSTAPSVPQPYSKEEVRQRVEEDRRGMYSDQEPVTRPITFYEAAARALKYNLDYRLKLME
STLSRQLVDVTKHDMLPKLVASAGYTHRSNDSGGVSVGIQDGQISLRPSTSEQRYHRLADLDLTWSTLDFLVAYERTQQK
ADQVLMAEERRRKVVQNVLQDVRNAYWRALGAQRLIGQVDALLNKVRQGLKAAQEADEKGLLPRQQALAYQRALLDAVSL
LSARRQDLELARAELAALMSLPPDQPFTLADEAEQRMPNDRFDVAGLEQMALESRPEIMEEWYRKRVTDNDIKIAKAELW
PSLSVDLGGHYDSNAYLYNNAWSAIGLRLSYNIFNLLKIPVLNEAQDSQNKVGDLRRMSLSMAVLTQVRVALQRYHLALE
QLDFAEESLQVDNRLRRFAEASAQVSADSRLEFIRADARMLLAQYQRYAAYSEAQAAWGRLYNSVGLDVMPDAIASHDVP
TLASEIEQTMQGWQQKLYPSAVDSKS
>Mature_506_residues
MRKSSQPLAIALAATLLTTACSTAPSVPQPYSKEEVRQRVEEDRRGMYSDQEPVTRPITFYEAAARALKYNLDYRLKLME
STLSRQLVDVTKHDMLPKLVASAGYTHRSNDSGGVSVGIQDGQISLRPSTSEQRYHRLADLDLTWSTLDFLVAYERTQQK
ADQVLMAEERRRKVVQNVLQDVRNAYWRALGAQRLIGQVDALLNKVRQGLKAAQEADEKGLLPRQQALAYQRALLDAVSL
LSARRQDLELARAELAALMSLPPDQPFTLADEAEQRMPNDRFDVAGLEQMALESRPEIMEEWYRKRVTDNDIKIAKAELW
PSLSVDLGGHYDSNAYLYNNAWSAIGLRLSYNIFNLLKIPVLNEAQDSQNKVGDLRRMSLSMAVLTQVRVALQRYHLALE
QLDFAEESLQVDNRLRRFAEASAQVSADSRLEFIRADARMLLAQYQRYAAYSEAQAAWGRLYNSVGLDVMPDAIASHDVP
TLASEIEQTMQGWQQKLYPSAVDSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57215; Mature: 57215

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSSQPLAIALAATLLTTACSTAPSVPQPYSKEEVRQRVEEDRRGMYSDQEPVTRPITF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
YEAAARALKYNLDYRLKLMESTLSRQLVDVTKHDMLPKLVASAGYTHRSNDSGGVSVGIQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
DGQISLRPSTSEQRYHRLADLDLTWSTLDFLVAYERTQQKADQVLMAEERRRKVVQNVLQ
CCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRNAYWRALGAQRLIGQVDALLNKVRQGLKAAQEADEKGLLPRQQALAYQRALLDAVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSARRQDLELARAELAALMSLPPDQPFTLADEAEQRMPNDRFDVAGLEQMALESRPEIME
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCHHHHH
EWYRKRVTDNDIKIAKAELWPSLSVDLGGHYDSNAYLYNNAWSAIGLRLSYNIFNLLKIP
HHHHHCCCCCCCEEEHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHEEEHHHHHHHHCC
VLNEAQDSQNKVGDLRRMSLSMAVLTQVRVALQRYHLALEQLDFAEESLQVDNRLRRFAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAQVSADSRLEFIRADARMLLAQYQRYAAYSEAQAAWGRLYNSVGLDVMPDAIASHDVP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCH
TLASEIEQTMQGWQQKLYPSAVDSKS
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKSSQPLAIALAATLLTTACSTAPSVPQPYSKEEVRQRVEEDRRGMYSDQEPVTRPITF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
YEAAARALKYNLDYRLKLMESTLSRQLVDVTKHDMLPKLVASAGYTHRSNDSGGVSVGIQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
DGQISLRPSTSEQRYHRLADLDLTWSTLDFLVAYERTQQKADQVLMAEERRRKVVQNVLQ
CCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRNAYWRALGAQRLIGQVDALLNKVRQGLKAAQEADEKGLLPRQQALAYQRALLDAVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSARRQDLELARAELAALMSLPPDQPFTLADEAEQRMPNDRFDVAGLEQMALESRPEIME
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCHHHHH
EWYRKRVTDNDIKIAKAELWPSLSVDLGGHYDSNAYLYNNAWSAIGLRLSYNIFNLLKIP
HHHHHCCCCCCCEEEHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHEEEHHHHHHHHCC
VLNEAQDSQNKVGDLRRMSLSMAVLTQVRVALQRYHLALEQLDFAEESLQVDNRLRRFAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAQVSADSRLEFIRADARMLLAQYQRYAAYSEAQAAWGRLYNSVGLDVMPDAIASHDVP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCH
TLASEIEQTMQGWQQKLYPSAVDSKS
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA