| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314324
Identifier: 94314324
GI number: 94314324
Start: 2135437
End: 2136405
Strand: Direct
Name: 94314324
Synonym: Rmet_5405
Alternate gene names: NA
Gene position: 2135437-2136405 (Clockwise)
Preceding gene: 94314323
Following gene: 94314325
Centisome position: 82.77
GC content: 60.89
Gene sequence:
>969_bases ATGCAGCCAGCGACCTCGTCCGATCTGGTGGCTCGGACGATCCATGAGTACTGCAGTCAGCCAAACCCGTTCTTCCACGG TCGCCAATGGCGGCCGTCTCAGCAAGCCATGCCCACCACCGGAATCCGGCGAAGGCATCCATATCCAAGGGGGTTCGCTA TGAATCGTGCATTGTGTATTGCCGCGCTGGCCATTTCGCTGGGCGCGTGCAGCAGTCCGGCCCCGCAGGCCACCTCATCG CCCGCGCCAGACACCCAGACGGCTGCCAAGGCGCCGCCGCCCGAAAGCAAGCCTGACGCCAACGCAGTGAACGCCGATGC CATCCAGGCCTTGAAGGACATGGGTGGATATCTGCAGACGCTGAAGCAGTTCTCCGTCAAGATCGACCTCGATGGCGAAC GCGTGCTTGAAGACGGACAGAAGCTACAGCATTCGGCCAGTGCCCGCGTCGATGCCGATCGACCCGACAAGATGCGTGTG CAGATGCGAAGTGCACGGGCACAGCGTGACCTGTACTACGACGGGCATAAGGTTGCGCTCTATTACCCGGAAAGCAACTA CTACAGCACGGTCGACTCGAGCGACAACCTGAGCAACCTCGTGGTCAAACTGCGGGAGCGCTTCGGCATCGAGGTACCGG TTGACGACCTGTTCCTGTGGGGCACGCCGAATGCACCAACGAACGGCATCACATCCGCCATGGTCGCGGGACAGGACTTG ATCGACGGCCAGCTGTGCGACCAGTACGCATTCCGTCAGGGCATGATCGACTGGCAGATCTGGATCGCCTCCGGTAACCA GCCACTGCCGCGAAAGATCGTGGTCACAAACCGGAGCGATGAAGCGCGGCCGCAATCCGTGACGTGGTTGACCTGGAACC TGAAGCCGAAGTTCACAGCTTCCACCTTCCATTTCACGCCGCCCAAGGGAGCGAAAGTCGCCGAGTTCGTCCCCCTCAAG AATCAATGA
Upstream 100 bases:
>100_bases TATCTGCCGCCCCCGCCTCGCACGTGCACCGCAATCGCCGCGCGCCAACGCCGCAGCGTGGATTCCGCATACCTGCGCGG TTGAACCGTTACGGGATTCC
Downstream 100 bases:
>100_bases AGGAGCCACCAATGAAACACTCTCTCAATCAGGCGATCGTAGCGCTGCTGGGTGCAGTCATCGTGGTGGCAAGTGGATGG GCACCCGTTGCCGAAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MQPATSSDLVARTIHEYCSQPNPFFHGRQWRPSQQAMPTTGIRRRHPYPRGFAMNRALCIAALAISLGACSSPAPQATSS PAPDTQTAAKAPPPESKPDANAVNADAIQALKDMGGYLQTLKQFSVKIDLDGERVLEDGQKLQHSASARVDADRPDKMRV QMRSARAQRDLYYDGHKVALYYPESNYYSTVDSSDNLSNLVVKLRERFGIEVPVDDLFLWGTPNAPTNGITSAMVAGQDL IDGQLCDQYAFRQGMIDWQIWIASGNQPLPRKIVVTNRSDEARPQSVTWLTWNLKPKFTASTFHFTPPKGAKVAEFVPLK NQ
Sequences:
>Translated_322_residues MQPATSSDLVARTIHEYCSQPNPFFHGRQWRPSQQAMPTTGIRRRHPYPRGFAMNRALCIAALAISLGACSSPAPQATSS PAPDTQTAAKAPPPESKPDANAVNADAIQALKDMGGYLQTLKQFSVKIDLDGERVLEDGQKLQHSASARVDADRPDKMRV QMRSARAQRDLYYDGHKVALYYPESNYYSTVDSSDNLSNLVVKLRERFGIEVPVDDLFLWGTPNAPTNGITSAMVAGQDL IDGQLCDQYAFRQGMIDWQIWIASGNQPLPRKIVVTNRSDEARPQSVTWLTWNLKPKFTASTFHFTPPKGAKVAEFVPLK NQ >Mature_322_residues MQPATSSDLVARTIHEYCSQPNPFFHGRQWRPSQQAMPTTGIRRRHPYPRGFAMNRALCIAALAISLGACSSPAPQATSS PAPDTQTAAKAPPPESKPDANAVNADAIQALKDMGGYLQTLKQFSVKIDLDGERVLEDGQKLQHSASARVDADRPDKMRV QMRSARAQRDLYYDGHKVALYYPESNYYSTVDSSDNLSNLVVKLRERFGIEVPVDDLFLWGTPNAPTNGITSAMVAGQDL IDGQLCDQYAFRQGMIDWQIWIASGNQPLPRKIVVTNRSDEARPQSVTWLTWNLKPKFTASTFHFTPPKGAKVAEFVPLK NQ
Specific function: Unknown
COG id: COG3900
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35718; Mature: 35718
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPATSSDLVARTIHEYCSQPNPFFHGRQWRPSQQAMPTTGIRRRHPYPRGFAMNRALCI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHH AALAISLGACSSPAPQATSSPAPDTQTAAKAPPPESKPDANAVNADAIQALKDMGGYLQT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKQFSVKIDLDGERVLEDGQKLQHSASARVDADRPDKMRVQMRSARAQRDLYYDGHKVAL HHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEECCEEEEE YYPESNYYSTVDSSDNLSNLVVKLRERFGIEVPVDDLFLWGTPNAPTNGITSAMVAGQDL EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCHHHHHHCCCHH IDGQLCDQYAFRQGMIDWQIWIASGNQPLPRKIVVTNRSDEARPQSVTWLTWNLKPKFTA HCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEE STFHFTPPKGAKVAEFVPLKNQ CEEEECCCCCCCCEEECCCCCC >Mature Secondary Structure MQPATSSDLVARTIHEYCSQPNPFFHGRQWRPSQQAMPTTGIRRRHPYPRGFAMNRALCI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHH AALAISLGACSSPAPQATSSPAPDTQTAAKAPPPESKPDANAVNADAIQALKDMGGYLQT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKQFSVKIDLDGERVLEDGQKLQHSASARVDADRPDKMRVQMRSARAQRDLYYDGHKVAL HHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEECCEEEEE YYPESNYYSTVDSSDNLSNLVVKLRERFGIEVPVDDLFLWGTPNAPTNGITSAMVAGQDL EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCHHHHHHCCCHH IDGQLCDQYAFRQGMIDWQIWIASGNQPLPRKIVVTNRSDEARPQSVTWLTWNLKPKFTA HCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEE STFHFTPPKGAKVAEFVPLKNQ CEEEECCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA