| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314306
Identifier: 94314306
GI number: 94314306
Start: 2112186
End: 2113508
Strand: Direct
Name: 94314306
Synonym: Rmet_5387
Alternate gene names: NA
Gene position: 2112186-2113508 (Clockwise)
Preceding gene: 94314304
Following gene: 94314311
Centisome position: 81.87
GC content: 66.52
Gene sequence:
>1323_bases ATGGTTCGCCTGCTGATGCTGCTGTTGGGAGTGGATTACCTGCGTACACGTTGGAAAGCGCTGGCCTGGGCCGGCGCCCT CAGCATAGTGGTCGGTGCCGTGCTGTTCATCGATGCGCTCGACGGCAAGCTTGATTTCCCGATCCAGCCGTTTGCCTGGC TGCTGCTTCTGGAAGGGCTGGCCACGCTGGCCGTCGCCTCGACCGGCATTGGTGGCCAGCGTACGCTGCGCTACGCCAAG GGCATCGCCTTCAGCGTGGCCGCCATCCTCGTGCTGGCCGAGCGCCACCATGGCCACATGGTCCTGTCGGTCATCTTCGG CGCGCTGTTTCTGGCCGATGGCCTGCTGCAGGTGGCCTCCGCGCATGTGGTGCGCTTTCGCACGTGGCGGCTGGCAATGG CGGGAGGCGTGATCGAGATCGCCCTGGCCATCTTCTTCATCCAGCCCTACCCGACGCACTATGTCGGCACCGTGCCCTAC TGCGTGGCGCTCGGGCTGATCTTCGGCGGCTGGAACATGTTGCTGCTGGCATCGCGCGCGCGCCGGCTTGCCGGCAACCC CGGCCTGCGCAAGGATCCGGAGTCCGCCAGCGCCGAATCGAACAAGCGGCGCCTGACGACGTGGAGCGGACCGCCCGCGT CGGACGAACGCGCGTTGACCGTCCACGTCTGGACGCCCGTGGGTTCCGCGAAGTCCAAGGCACAGCATCAGCCGATCATC GACCGCTACATCGCCGCCGTCGACCGCGATGGCGTTATCTCCACGGGGCACGCCGCGCTGGAATCACCTGAAGGCATCTA CATCAGCCTCTACCCGGCCGTCGAGATCGACCGTTCGCCAGACGATTTCACGCGGCTGCTGCGGGCCACGCAGGAGAACA ACGTACCCGGACGGTTCCAGCCTGACTATCCGACAGAATCCAAGGCATGGTGCGCGTCGACCGTTCAGGTCCGTATTCGC AATTACGATGCCGAGCGCCTGCAGAACTTCTGGCACGACTATCGGCAGAACACGACCTACAACCTGACATACCGGAACTG CTCGAGCACGGTGGCACGTGCGCTCGATGCCGCACTGGAGGGCGCCGCCACACGTGCCTGGACGCGGCTCGGCGGCTGGT GGCCGCTGTTCCGGCTATTGCTGACACCGGAGTTGTGGGTAGCAGCCCATCTGCGCAAGCGCGCCGCCACCATGGCGTGG ACGCCGGGCCTGACACTCGACTACGCTCGCGCCATGAGCATGTTGGCCGACCCGCGCCCCTTTGCGTGGGCGACCGTGTG GAGCGGGCTGGCGGCGCGGCGCTCGGGGCGCGAATCGCGCTAG
Upstream 100 bases:
>100_bases GGGGGTGGCAGCGCCGGCTACCTTGCCGTCATGCTGGTTCAGGCATTGAAAGAGACGGTAGAATCCGCAAACCATTCATA CCGCCACGCCGGAGACGCCA
Downstream 100 bases:
>100_bases TGCCGTGTCAGCTTGACGGCGCCTCGTCCGCAAAGCATCCGGTTCCGATCGTGCGCAGCGCCTCGCCATCGCGCACGATG AAGAGGACGTCGAGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Proteases; Conserved Protein
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MVRLLMLLLGVDYLRTRWKALAWAGALSIVVGAVLFIDALDGKLDFPIQPFAWLLLLEGLATLAVASTGIGGQRTLRYAK GIAFSVAAILVLAERHHGHMVLSVIFGALFLADGLLQVASAHVVRFRTWRLAMAGGVIEIALAIFFIQPYPTHYVGTVPY CVALGLIFGGWNMLLLASRARRLAGNPGLRKDPESASAESNKRRLTTWSGPPASDERALTVHVWTPVGSAKSKAQHQPII DRYIAAVDRDGVISTGHAALESPEGIYISLYPAVEIDRSPDDFTRLLRATQENNVPGRFQPDYPTESKAWCASTVQVRIR NYDAERLQNFWHDYRQNTTYNLTYRNCSSTVARALDAALEGAATRAWTRLGGWWPLFRLLLTPELWVAAHLRKRAATMAW TPGLTLDYARAMSMLADPRPFAWATVWSGLAARRSGRESR
Sequences:
>Translated_440_residues MVRLLMLLLGVDYLRTRWKALAWAGALSIVVGAVLFIDALDGKLDFPIQPFAWLLLLEGLATLAVASTGIGGQRTLRYAK GIAFSVAAILVLAERHHGHMVLSVIFGALFLADGLLQVASAHVVRFRTWRLAMAGGVIEIALAIFFIQPYPTHYVGTVPY CVALGLIFGGWNMLLLASRARRLAGNPGLRKDPESASAESNKRRLTTWSGPPASDERALTVHVWTPVGSAKSKAQHQPII DRYIAAVDRDGVISTGHAALESPEGIYISLYPAVEIDRSPDDFTRLLRATQENNVPGRFQPDYPTESKAWCASTVQVRIR NYDAERLQNFWHDYRQNTTYNLTYRNCSSTVARALDAALEGAATRAWTRLGGWWPLFRLLLTPELWVAAHLRKRAATMAW TPGLTLDYARAMSMLADPRPFAWATVWSGLAARRSGRESR >Mature_440_residues MVRLLMLLLGVDYLRTRWKALAWAGALSIVVGAVLFIDALDGKLDFPIQPFAWLLLLEGLATLAVASTGIGGQRTLRYAK GIAFSVAAILVLAERHHGHMVLSVIFGALFLADGLLQVASAHVVRFRTWRLAMAGGVIEIALAIFFIQPYPTHYVGTVPY CVALGLIFGGWNMLLLASRARRLAGNPGLRKDPESASAESNKRRLTTWSGPPASDERALTVHVWTPVGSAKSKAQHQPII DRYIAAVDRDGVISTGHAALESPEGIYISLYPAVEIDRSPDDFTRLLRATQENNVPGRFQPDYPTESKAWCASTVQVRIR NYDAERLQNFWHDYRQNTTYNLTYRNCSSTVARALDAALEGAATRAWTRLGGWWPLFRLLLTPELWVAAHLRKRAATMAW TPGLTLDYARAMSMLADPRPFAWATVWSGLAARRSGRESR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48706; Mature: 48706
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLLMLLLGVDYLRTRWKALAWAGALSIVVGAVLFIDALDGKLDFPIQPFAWLLLLEGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ATLAVASTGIGGQRTLRYAKGIAFSVAAILVLAERHHGHMVLSVIFGALFLADGLLQVAS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AHVVRFRTWRLAMAGGVIEIALAIFFIQPYPTHYVGTVPYCVALGLIFGGWNMLLLASRA HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH RRLAGNPGLRKDPESASAESNKRRLTTWSGPPASDERALTVHVWTPVGSAKSKAQHQPII HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHCCHHH DRYIAAVDRDGVISTGHAALESPEGIYISLYPAVEIDRSPDDFTRLLRATQENNVPGRFQ HHHHHHHCCCCCEECCCHHHCCCCCEEEEEEECEEECCCHHHHHHHHHHHHCCCCCCCCC PDYPTESKAWCASTVQVRIRNYDAERLQNFWHDYRQNTTYNLTYRNCSSTVARALDAALE CCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH GAATRAWTRLGGWWPLFRLLLTPELWVAAHLRKRAATMAWTPGLTLDYARAMSMLADPRP HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCC FAWATVWSGLAARRSGRESR CHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVRLLMLLLGVDYLRTRWKALAWAGALSIVVGAVLFIDALDGKLDFPIQPFAWLLLLEGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ATLAVASTGIGGQRTLRYAKGIAFSVAAILVLAERHHGHMVLSVIFGALFLADGLLQVAS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AHVVRFRTWRLAMAGGVIEIALAIFFIQPYPTHYVGTVPYCVALGLIFGGWNMLLLASRA HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH RRLAGNPGLRKDPESASAESNKRRLTTWSGPPASDERALTVHVWTPVGSAKSKAQHQPII HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHCCHHH DRYIAAVDRDGVISTGHAALESPEGIYISLYPAVEIDRSPDDFTRLLRATQENNVPGRFQ HHHHHHHCCCCCEECCCHHHCCCCCEEEEEEECEEECCCHHHHHHHHHHHHCCCCCCCCC PDYPTESKAWCASTVQVRIRNYDAERLQNFWHDYRQNTTYNLTYRNCSSTVARALDAALE CCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH GAATRAWTRLGGWWPLFRLLLTPELWVAAHLRKRAATMAWTPGLTLDYARAMSMLADPRP HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCC FAWATVWSGLAARRSGRESR CHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA