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The map label for this gene is frc [H]

Identifier: 94314281

GI number: 94314281

Start: 2083311

End: 2084522

Strand: Direct

Name: frc [H]

Synonym: Rmet_5362

Alternate gene names: 94314281

Gene position: 2083311-2084522 (Clockwise)

Preceding gene: 94314280

Following gene: 94314284

Centisome position: 80.75

GC content: 65.68

Gene sequence:

>1212_bases
ATGGAGCGAATCTACGTGACCGTTTCAACCAAAGCAGATGTCGGACCACTGTCCGGCGTGCGCGTGCTCGATCTGTCCGC
CGTGGTGCTGGGCCCGATGGGCACCCAGGTGCTGGCCGACATGGGTGCGGACGTCATCAAGATCGAATCGCCCGAAGGCG
ACCTGATGCGCGCCAACGGCGTGGTCGAGGTGCCGGGCATGAGCTCGATCTTCCTGGCGCTGAACCGCAACAAGCGTTCG
GTCGTGCTGGACCTGAAGACCGAGGCCGGCCGCGCCGCATTGCGCCGCCTGATTCCAACCGTCGACGTGTTGGTGCATAA
CATGCGCGTCTCGGCGATCGAGCGGCTGGGTTTCGGCTATGACGCCGTGCGTGCGCTGAATCCCGAGATCGTCTACTGCG
CCGCCACCGGCTTCGGCCAGGATGGCCCGGATCGCGAGAAGCCCGCGTTCGACGACATCATCCAGGCCGCCTGCGGATTC
GTCGGCGCCGCGTCGATCAACGCCGACGAGCCCGACTATCTGCCGAGCCTGATCGCCGACAAGACCACAGGTCTGGCTGT
GGCCAACGCGGTGCTGGGCGCGCTGTTCCATCGCGAGCGGCATGGCCGCGGCCAGTACGTCGAGGTGCCGATGCTGGAAA
CGATGGCCGCGTTCGTGCTCACCGAGCATATGGGTGGCCTGACCTATCCGGGCTCCAAGGCCAAGGCTGGCTACGCACGC
CTGCTCGAAGGCGGCCGCAAGCCCGTGCGCACCAAGGATGGGTGGATGAGCCTGCTGCCATACACGGACAAGCACTGGAA
GGCCTTCTTCCACGAGGTGGACCGCGACGATCTGGGCGAACGCTACAACATCGCCAGCCGCGCCGACCGCAATGCGCACA
TCAAGGCGTTGTACAGCCACCTGCGGGAGCTGGCGCCGCTTCGCACAACGGCACAGTGGATGAAGCTCTGCGAGCAACTC
GACATCCCCGCCACACCGATCTACTCGCTCGAAGCGCTGCCCGAGCATCCGCACCTGAAGGCCGTCGGTCTGTTCCAGGA
ATCGAAGCATCCCGTCGTCGGCACCATCCGGGAAATCCGGCCGACAGCGCGCTTCGCAGGCACGCCGACCTCGATCCGCC
GTCCCGCCCCGACGCTGGGGCGTGACACGGCCGAGGTACTGCGTGAAGCCGGGTTCGAGGAAAGCGAAATCAAGGCGCTT
GGCGGAAGCTAA

Upstream 100 bases:

>100_bases
GGCTATCCAGCTCACGCAATTCCCGACCGAGGATTTTCGCGAAGGCGTGGCAGCCATGGCCGAACGCCGTCCGCCGAACT
TCCGTCGTCGCTGATACTCA

Downstream 100 bases:

>100_bases
GCGGTGGATGCCGCGCGTCGGCGATTTCCCGTCAGGTCGACGCCGGCGGCGTCGCGGCCAGCGCGATCCTTGCCAGCGCC
TTCATCTTCCGTCTCCTGAC

Product: putative CoA-transferase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MERIYVTVSTKADVGPLSGVRVLDLSAVVLGPMGTQVLADMGADVIKIESPEGDLMRANGVVEVPGMSSIFLALNRNKRS
VVLDLKTEAGRAALRRLIPTVDVLVHNMRVSAIERLGFGYDAVRALNPEIVYCAATGFGQDGPDREKPAFDDIIQAACGF
VGAASINADEPDYLPSLIADKTTGLAVANAVLGALFHRERHGRGQYVEVPMLETMAAFVLTEHMGGLTYPGSKAKAGYAR
LLEGGRKPVRTKDGWMSLLPYTDKHWKAFFHEVDRDDLGERYNIASRADRNAHIKALYSHLRELAPLRTTAQWMKLCEQL
DIPATPIYSLEALPEHPHLKAVGLFQESKHPVVGTIREIRPTARFAGTPTSIRRPAPTLGRDTAEVLREAGFEESEIKAL
GGS

Sequences:

>Translated_403_residues
MERIYVTVSTKADVGPLSGVRVLDLSAVVLGPMGTQVLADMGADVIKIESPEGDLMRANGVVEVPGMSSIFLALNRNKRS
VVLDLKTEAGRAALRRLIPTVDVLVHNMRVSAIERLGFGYDAVRALNPEIVYCAATGFGQDGPDREKPAFDDIIQAACGF
VGAASINADEPDYLPSLIADKTTGLAVANAVLGALFHRERHGRGQYVEVPMLETMAAFVLTEHMGGLTYPGSKAKAGYAR
LLEGGRKPVRTKDGWMSLLPYTDKHWKAFFHEVDRDDLGERYNIASRADRNAHIKALYSHLRELAPLRTTAQWMKLCEQL
DIPATPIYSLEALPEHPHLKAVGLFQESKHPVVGTIREIRPTARFAGTPTSIRRPAPTLGRDTAEVLREAGFEESEIKAL
GGS
>Mature_403_residues
MERIYVTVSTKADVGPLSGVRVLDLSAVVLGPMGTQVLADMGADVIKIESPEGDLMRANGVVEVPGMSSIFLALNRNKRS
VVLDLKTEAGRAALRRLIPTVDVLVHNMRVSAIERLGFGYDAVRALNPEIVYCAATGFGQDGPDREKPAFDDIIQAACGF
VGAASINADEPDYLPSLIADKTTGLAVANAVLGALFHRERHGRGQYVEVPMLETMAAFVLTEHMGGLTYPGSKAKAGYAR
LLEGGRKPVRTKDGWMSLLPYTDKHWKAFFHEVDRDDLGERYNIASRADRNAHIKALYSHLRELAPLRTTAQWMKLCEQL
DIPATPIYSLEALPEHPHLKAVGLFQESKHPVVGTIREIRPTARFAGTPTSIRRPAPTLGRDTAEVLREAGFEESEIKAL
GGS

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=384, Percent_Identity=28.6458333333333, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI300863124, Length=410, Percent_Identity=27.3170731707317, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI300863126, Length=382, Percent_Identity=27.2251308900524, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI13376042, Length=410, Percent_Identity=25.1219512195122, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI266456254, Length=395, Percent_Identity=28.8607594936709, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI42794625, Length=395, Percent_Identity=28.8607594936709, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI266458393, Length=203, Percent_Identity=33.9901477832512, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI266458397, Length=203, Percent_Identity=33.9901477832512, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI42822893, Length=126, Percent_Identity=37.3015873015873, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI266458395, Length=128, Percent_Identity=37.5, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87082093, Length=335, Percent_Identity=27.7611940298507, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1788717, Length=409, Percent_Identity=27.3838630806846, Blast_Score=151, Evalue=7e-38,
Organism=Escherichia coli, GI1786222, Length=399, Percent_Identity=25.31328320802, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI32564160, Length=203, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=392, Percent_Identity=33.1632653061224, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24585488, Length=397, Percent_Identity=26.448362720403, Blast_Score=99, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43915; Mature: 43915

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIYVTVSTKADVGPLSGVRVLDLSAVVLGPMGTQVLADMGADVIKIESPEGDLMRANG
CCEEEEEEECCCCCCCCCCEEEEEEHHHEECCCHHHHHHHCCCCEEEEECCCCCEEECCC
VVEVPGMSSIFLALNRNKRSVVLDLKTEAGRAALRRLIPTVDVLVHNMRVSAIERLGFGY
EEECCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DAVRALNPEIVYCAATGFGQDGPDREKPAFDDIIQAACGFVGAASINADEPDYLPSLIAD
HHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCHHEECCCCCCCCHHHHHHHHC
KTTGLAVANAVLGALFHRERHGRGQYVEVPMLETMAAFVLTEHMGGLTYPGSKAKAGYAR
CCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLEGGRKPVRTKDGWMSLLPYTDKHWKAFFHEVDRDDLGERYNIASRADRNAHIKALYSH
HHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHHHHHH
LRELAPLRTTAQWMKLCEQLDIPATPIYSLEALPEHPHLKAVGLFQESKHPVVGTIREIR
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCEEEEECHHCCCCCHHHHHHHHC
PTARFAGTPTSIRRPAPTLGRDTAEVLREAGFEESEIKALGGS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure
MERIYVTVSTKADVGPLSGVRVLDLSAVVLGPMGTQVLADMGADVIKIESPEGDLMRANG
CCEEEEEEECCCCCCCCCCEEEEEEHHHEECCCHHHHHHHCCCCEEEEECCCCCEEECCC
VVEVPGMSSIFLALNRNKRSVVLDLKTEAGRAALRRLIPTVDVLVHNMRVSAIERLGFGY
EEECCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DAVRALNPEIVYCAATGFGQDGPDREKPAFDDIIQAACGFVGAASINADEPDYLPSLIAD
HHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCHHEECCCCCCCCHHHHHHHHC
KTTGLAVANAVLGALFHRERHGRGQYVEVPMLETMAAFVLTEHMGGLTYPGSKAKAGYAR
CCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLEGGRKPVRTKDGWMSLLPYTDKHWKAFFHEVDRDDLGERYNIASRADRNAHIKALYSH
HHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHHHHHH
LRELAPLRTTAQWMKLCEQLDIPATPIYSLEALPEHPHLKAVGLFQESKHPVVGTIREIR
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCEEEEECHHCCCCCHHHHHHHHC
PTARFAGTPTSIRRPAPTLGRDTAEVLREAGFEESEIKALGGS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA