Click here to switch to the map view.

The map label for this gene is zniB [H]

Identifier: 94314239

GI number: 94314239

Start: 2028681

End: 2029895

Strand: Reverse

Name: zniB [H]

Synonym: Rmet_5320

Alternate gene names: 94314239

Gene position: 2029895-2028681 (Counterclockwise)

Preceding gene: 94314241

Following gene: 94314238

Centisome position: 78.68

GC content: 64.61

Gene sequence:

>1215_bases
ATGCGTTTCGATGCCAAGTCCGCCATCCTGGGCGGGGGCGCCACCGCTGTGGTCCTGGTGGGGTTGATGTTCGCATTCAA
CGCGTGGACGCAGCCCAGCCCGCTCTACGGCCCGGAAAAAGGCTTTGGTCAGGGCGGTCCGTCGGCGCCCAAGGTGGCGC
CGCGCGGGTCGTCCGTCACGCTGACCCAGACTCAGATGGGTACGGTCAAGGTCGTGTCGGTGCAAGACTATGCGTTCGCC
AACCAGCGTGAAGCCGTCGGCAATATCGACTTCAATCAGGACCGCTCGGTCCAGGTGTTCACCGCCTACCAGGGCAAGGT
CCGCAACGTGTTCGTCAAGGTTGGCGAAGACGTGGCCAAGGGAGCACCGTTGTTCGATATCGAGAGCCCGGATCTGGTCC
AGGCCGAATCGACGCTGATCTCCGCAGCCGGCGCGCGCAAGCTCAATGCCAAGGCGCTGGAGCGCGCGCATCAGCTCTTT
GAGATCCAGGGTATCGCGCAGAAGGATCTCGACCAGGCCATCTCCGATCAGCAGGCCGCGGAAGCCGCCTACAAGGCAGC
GCGCGACGCCGTGGCCATCTTCGGCAAGAGCGCGTCCGAAATGGATCGCATCATCGAACAACGTCGCACCGATCCGGTCC
TGACCGTGTTCAGCCCGATAGCGGGCCGCGTGACGGCGCGCAATGCACAGCCGGGCCTGCTGGTCCAGCCCGGCAACAGC
CCGGCACCAATCACGGTTTCCGATATCTCTACGGTCTGGATGCAGGCATTCGTGACCGAAGCAGACAGCCCGCTGCTGAA
GGTGGGACAGGCAGTCAAGGTCCATGCGATGGCCTTTCCGGGGCGGGAGTTCGCCGGAACCATCACGACGACGGGTGCGT
CCATCGACTCCGCCACGCACCGTCTGATGGTCCGTTCCGAGGTCAAGGACCCGAAGCACGAACTGCGGCCGGGGATGATC
ACATCCTTCTCGATACGCACCGGTGAGCCAGATCATTCCGCGGCGGTCGCCGCCGATGGTCTGGTGCGCGAAGGCGACGG
CACGATGACCGTATGGACGACCACGGATCAGCGCCGCTTCGAGCGCCGCGTGGTCACGGTCGGACAGACCCAGGACGGTC
TGGTGCAGATTCTCAGCGGCCTTGCGCCGGGCGAGCTTGTGGCGAGCGAAGGGGCATTGTTCCTGAGCAATGCCGCGGCA
CTGGCCGCTCAGTAA

Upstream 100 bases:

>100_bases
AGCGATGCGCCGGCCAGGCCACTGTCATTAATCACAGTAGACCGTGACGCGGCGAACTCTCATCATTTGCCCAAGTTTTC
AGAATCCAGAGGGTTAGTCC

Downstream 100 bases:

>100_bases
GCGTATCGACCGCTCCCCAGTCATCCCGAAGAATTCGAAGACGAGGCCTCCGTGCTCAGGAACGTACTTCGGTTGTCGCT
GACGCGACGGCCGCTCATTC

Product: membrane fusion protein heavy metal cation tricomponent efflux ZniB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRFDAKSAILGGGATAVVLVGLMFAFNAWTQPSPLYGPEKGFGQGGPSAPKVAPRGSSVTLTQTQMGTVKVVSVQDYAFA
NQREAVGNIDFNQDRSVQVFTAYQGKVRNVFVKVGEDVAKGAPLFDIESPDLVQAESTLISAAGARKLNAKALERAHQLF
EIQGIAQKDLDQAISDQQAAEAAYKAARDAVAIFGKSASEMDRIIEQRRTDPVLTVFSPIAGRVTARNAQPGLLVQPGNS
PAPITVSDISTVWMQAFVTEADSPLLKVGQAVKVHAMAFPGREFAGTITTTGASIDSATHRLMVRSEVKDPKHELRPGMI
TSFSIRTGEPDHSAAVAADGLVREGDGTMTVWTTTDQRRFERRVVTVGQTQDGLVQILSGLAPGELVASEGALFLSNAAA
LAAQ

Sequences:

>Translated_404_residues
MRFDAKSAILGGGATAVVLVGLMFAFNAWTQPSPLYGPEKGFGQGGPSAPKVAPRGSSVTLTQTQMGTVKVVSVQDYAFA
NQREAVGNIDFNQDRSVQVFTAYQGKVRNVFVKVGEDVAKGAPLFDIESPDLVQAESTLISAAGARKLNAKALERAHQLF
EIQGIAQKDLDQAISDQQAAEAAYKAARDAVAIFGKSASEMDRIIEQRRTDPVLTVFSPIAGRVTARNAQPGLLVQPGNS
PAPITVSDISTVWMQAFVTEADSPLLKVGQAVKVHAMAFPGREFAGTITTTGASIDSATHRLMVRSEVKDPKHELRPGMI
TSFSIRTGEPDHSAAVAADGLVREGDGTMTVWTTTDQRRFERRVVTVGQTQDGLVQILSGLAPGELVASEGALFLSNAAA
LAAQ
>Mature_404_residues
MRFDAKSAILGGGATAVVLVGLMFAFNAWTQPSPLYGPEKGFGQGGPSAPKVAPRGSSVTLTQTQMGTVKVVSVQDYAFA
NQREAVGNIDFNQDRSVQVFTAYQGKVRNVFVKVGEDVAKGAPLFDIESPDLVQAESTLISAAGARKLNAKALERAHQLF
EIQGIAQKDLDQAISDQQAAEAAYKAARDAVAIFGKSASEMDRIIEQRRTDPVLTVFSPIAGRVTARNAQPGLLVQPGNS
PAPITVSDISTVWMQAFVTEADSPLLKVGQAVKVHAMAFPGREFAGTITTTGASIDSATHRLMVRSEVKDPKHELRPGMI
TSFSIRTGEPDHSAAVAADGLVREGDGTMTVWTTTDQRRFERRVVTVGQTQDGLVQILSGLAPGELVASEGALFLSNAAA
LAAQ

Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=384, Percent_Identity=26.5625, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786668, Length=299, Percent_Identity=26.7558528428094, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42792; Mature: 42792

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDAKSAILGGGATAVVLVGLMFAFNAWTQPSPLYGPEKGFGQGGPSAPKVAPRGSSVT
CCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LTQTQMGTVKVVSVQDYAFANQREAVGNIDFNQDRSVQVFTAYQGKVRNVFVKVGEDVAK
EEEECCCEEEEEEEEHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHHC
GAPLFDIESPDLVQAESTLISAAGARKLNAKALERAHQLFEIQGIAQKDLDQAISDQQAA
CCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EAAYKAARDAVAIFGKSASEMDRIIEQRRTDPVLTVFSPIAGRVTARNAQPGLLVQPGNS
HHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCEEECCCCC
PAPITVSDISTVWMQAFVTEADSPLLKVGQAVKVHAMAFPGREFAGTITTTGASIDSATH
CCCEEHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEEECCCCHHCCEEEECCCCHHHHHH
RLMVRSEVKDPKHELRPGMITSFSIRTGEPDHSAAVAADGLVREGDGTMTVWTTTDQRRF
HHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHCCEEECCCCCEEEEECCHHHHH
ERRVVTVGQTQDGLVQILSGLAPGELVASEGALFLSNAAALAAQ
HHHEEEECCCCHHHHHHHHCCCCCHHHHCCCCEEEECCHHHCCC
>Mature Secondary Structure
MRFDAKSAILGGGATAVVLVGLMFAFNAWTQPSPLYGPEKGFGQGGPSAPKVAPRGSSVT
CCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LTQTQMGTVKVVSVQDYAFANQREAVGNIDFNQDRSVQVFTAYQGKVRNVFVKVGEDVAK
EEEECCCEEEEEEEEHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHHC
GAPLFDIESPDLVQAESTLISAAGARKLNAKALERAHQLFEIQGIAQKDLDQAISDQQAA
CCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EAAYKAARDAVAIFGKSASEMDRIIEQRRTDPVLTVFSPIAGRVTARNAQPGLLVQPGNS
HHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCEEECCCCC
PAPITVSDISTVWMQAFVTEADSPLLKVGQAVKVHAMAFPGREFAGTITTTGASIDSATH
CCCEEHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEEECCCCHHCCEEEECCCCHHHHHH
RLMVRSEVKDPKHELRPGMITSFSIRTGEPDHSAAVAADGLVREGDGTMTVWTTTDQRRF
HHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHCCEEECCCCCEEEEECCHHHHH
ERRVVTVGQTQDGLVQILSGLAPGELVASEGALFLSNAAALAAQ
HHHEEEECCCCHHHHHHHHCCCCCHHHHCCCCEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]