| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is dbpA [H]
Identifier: 94314203
GI number: 94314203
Start: 1984131
End: 1985534
Strand: Reverse
Name: dbpA [H]
Synonym: Rmet_5284
Alternate gene names: 94314203
Gene position: 1985534-1984131 (Counterclockwise)
Preceding gene: 94314209
Following gene: 94314201
Centisome position: 76.96
GC content: 65.03
Gene sequence:
>1404_bases ATGACTTCTTCAGCCCCTACCTCATTCGCCACGCTGCCGCTGTCCGCGGCCATGCAGGCTACCCTCGTCCAGCTCGGCTA CGACGCCATGACGCCGATCCAGGCCGCCAGCCTGCCGCTCGCGCTGGCTGGTCACGACCTCATCGCCCAGGCCCGCACCG GCAGCGGCAAGACCGCAGCGTTCGCGCTCTCACTGCTGCATCGTCTCGATCCGCGTCCGCTCGACGTACAGGCGCTGGTG CTCTGTCCCACACGTGAACTGGCCGATCAGGTCACACAGGAGATCCGTCGTCTCGCCCGCGCGGAGGACAACGTCAAGGT GCTGACGCTCAGTGGCGGCACGCCAATCCGGCCGCAGGTGGAGAGCCTTGTTCACGGCGCGCACGTTGTCGTAGGCACGC CGGGCCGCATCATCGATCACCTCGATCGCGGAAGCCTGAATATCGATGCGATCAACACGCTGGTGCTCGATGAAGCGGAC CGCATGCTCGACATGGGCTTTCACGATGACATCGCATTTATCGCCAGCCACGCACCGAAGGACCGGCAGACGCTGCTGTT CTCGGCCACCTATCCGGCTGCCATCGACAAGCTCGCCCATCGCTTCCTGCGCCAGCCGAAGACGGTGAAGGTGGAGGAGG CGCACGACGCGGCCACCATCACCCAACGCTTCTACGAGGTGGAGGAGGGCGATCGTCTCAACGCCGTCGGCCGATTGCTC GACCATTTCCGCCCGGCCACCACACTCGCCTTCTGTAATACGAAGGCGCGCTGCCGCGATCTGGCCGACCTGCTGCGCGC GCAGGGATATGCCGCGCTTGAACTGCACGGTGACCTCGATCAGCGCGATCGCGACCAGGTGCTGGTGCAGTTTGCTAACC GGAGCTGCTCGGTGCTGGTAGCTACCGACGTGGCCGCACGCGGGCTCGACATCGCGCAGCTGGAAGCCGTGATCAACGTG GACGTGACGCCCGACCCCGAGGTCCATGTCCACCGCGTCGGCCGTACCGGACGCGCTGGCGAAGCAGGCTCGGCCTTCAG CCTCGTCAGCCTGGATGAAATGGGTCGCGTCGGCAACATCGAGCAGCACCAGGGCGGTGAGTTCGAATGGCACGCGCTTG ACGAACTGAAGCCGTCAGGCGGCGGACGTCTGCTGCCGCCAATGGTCACGCTGCAGATGCTGGGTGGGCGCAAGGAGAAG ATCCGGCCCGGCGACATCCTCGGCGCGCTGACCGGAGAGGCTGGCTTCACAAAGGAGCAGATCGGCAAGATCAGCGTGAT GGAGATGTCGACCTATATCGCCGTGGACCGCGCCATCGGTCGCGAGGCGGTGAAACGGCTGAACGAAGGCAAGGTGAAGG GCCGCAAGGTGAGAGTGAGAATGCTGACGACCGATCAGCGGTAA
Upstream 100 bases:
>100_bases CCGGTCGCGGCGATGGCCCAGCGTGTGCTGATTTCGTCATGCCGTCGGGCCGCAGGGCAGGTAAGGCGTGCAAGACGCGG CCGCGCATCTATAATCCGGC
Downstream 100 bases:
>100_bases CTCGGCTGAGCCATACCAGCGAGCCTGGCGCAGCGGTGATCAGGATATGTGCGACTGATCCGATCGCAAACGCCAGGTCG CCGGCTCTACCGTCACCATA
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAAFALSLLHRLDPRPLDVQALV LCPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQVESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEAD RMLDMGFHDDIAFIASHAPKDRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLL DHFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLVATDVAARGLDIAQLEAVINV DVTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNIEQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEK IRPGDILGALTGEAGFTKEQIGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR
Sequences:
>Translated_467_residues MTSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAAFALSLLHRLDPRPLDVQALV LCPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQVESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEAD RMLDMGFHDDIAFIASHAPKDRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLL DHFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLVATDVAARGLDIAQLEAVINV DVTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNIEQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEK IRPGDILGALTGEAGFTKEQIGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR >Mature_466_residues TSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAAFALSLLHRLDPRPLDVQALVL CPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQVESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADR MLDMGFHDDIAFIASHAPKDRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLLD HFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLVATDVAARGLDIAQLEAVINVD VTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNIEQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEKI RPGDILGALTGEAGFTKEQIGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=40.8839779005525, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=40.8839779005525, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=34.1463414634146, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=39.010989010989, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=34.9726775956284, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=39.142091152815, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=35.2617079889807, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=39.142091152815, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=39.142091152815, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI148613856, Length=342, Percent_Identity=38.5964912280702, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI38201710, Length=342, Percent_Identity=38.5964912280702, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI20149629, Length=345, Percent_Identity=37.1014492753623, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=38.1962864721485, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=38.1962864721485, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=36.6754617414248, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=40.1129943502825, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=35.9042553191489, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=36.9747899159664, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=35.3562005277045, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=32.9842931937173, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI188035877, Length=390, Percent_Identity=31.7948717948718, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=31.767955801105, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=31.767955801105, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=33.879781420765, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=31.6526610644258, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI13514831, Length=372, Percent_Identity=34.4086021505376, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI256223453, Length=348, Percent_Identity=31.6091954022989, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=34.7578347578348, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=34.4512195121951, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=34.7578347578348, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI55749865, Length=339, Percent_Identity=32.7433628318584, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI41327776, Length=344, Percent_Identity=33.7209302325581, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI222352149, Length=338, Percent_Identity=34.6153846153846, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI9506931, Length=454, Percent_Identity=31.9383259911894, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI41327779, Length=405, Percent_Identity=31.8518518518519, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=31.6239316239316, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=31.5926892950392, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=31.5926892950392, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI38327634, Length=387, Percent_Identity=31.7829457364341, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=31.9672131147541, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=31.6860465116279, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI17505907, Length=399, Percent_Identity=29.0726817042606, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI38569503, Length=381, Percent_Identity=29.9212598425197, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=29.9212598425197, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.6547619047619, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI154759257, Length=405, Percent_Identity=29.1358024691358, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=34.0836012861736, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=30.6493506493506, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=337, Percent_Identity=27.893175074184, Blast_Score=110, Evalue=4e-24, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=50.7658643326039, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI87082221, Length=357, Percent_Identity=42.0168067226891, Blast_Score=271, Evalue=8e-74, Organism=Escherichia coli, GI1787016, Length=362, Percent_Identity=39.7790055248619, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1790214, Length=368, Percent_Identity=36.1413043478261, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI1788930, Length=380, Percent_Identity=36.3157894736842, Blast_Score=192, Evalue=5e-50, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=35.1648351648352, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=38.5041551246537, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=35.8490566037736, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=35.5191256830601, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=31.4917127071823, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=39.8305084745763, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=37.0967741935484, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=37.9220779220779, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=36.7292225201072, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=38.0821917808219, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=38.5269121813031, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=36.1930294906166, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=38.7362637362637, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=38.7362637362637, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=38.7362637362637, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI71982858, Length=332, Percent_Identity=33.1325301204819, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI32565321, Length=375, Percent_Identity=34.1333333333333, Blast_Score=198, Evalue=6e-51, Organism=Caenorhabditis elegans, GI115532548, Length=405, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=33.4210526315789, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=37.0056497175141, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507881, Length=375, Percent_Identity=34.6666666666667, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71999646, Length=352, Percent_Identity=32.9545454545455, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=33.6065573770492, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI71999644, Length=352, Percent_Identity=32.9545454545455, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.6239316239316, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17537549, Length=361, Percent_Identity=33.7950138504155, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17505370, Length=390, Percent_Identity=32.3076923076923, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=32.7272727272727, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=32.7272727272727, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=32.7272727272727, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17553716, Length=347, Percent_Identity=29.1066282420749, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17556951, Length=388, Percent_Identity=31.4432989690722, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=30.5483028720627, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71990816, Length=378, Percent_Identity=30.6878306878307, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=28.3422459893048, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71982862, Length=182, Percent_Identity=35.1648351648352, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=25.3071253071253, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=29.6954314720812, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI32564046, Length=367, Percent_Identity=29.700272479564, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71997889, Length=404, Percent_Identity=25.990099009901, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148291, Length=361, Percent_Identity=27.7008310249307, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148205, Length=352, Percent_Identity=24.7159090909091, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17557982, Length=372, Percent_Identity=24.7311827956989, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=38.9473684210526, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=340, Percent_Identity=40.5882352941176, Blast_Score=253, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=38.9204545454545, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=32.6869806094183, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=38.3378016085791, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=39.2265193370166, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=32.7868852459016, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=37.6373626373626, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=374, Percent_Identity=37.9679144385027, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=32.8651685393258, Blast_Score=206, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=348, Percent_Identity=34.7701149425287, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=348, Percent_Identity=34.7701149425287, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=33.7988826815642, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=33.2409972299169, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=388, Percent_Identity=30.4123711340206, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=368, Percent_Identity=34.5108695652174, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=29.6587926509186, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=29.6650717703349, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=28.6103542234332, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=28.3887468030691, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=419, Percent_Identity=26.2529832935561, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=30.4582210242588, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320173, Length=228, Percent_Identity=32.8947368421053, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=26.0744985673352, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=377, Percent_Identity=23.0769230769231, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=39.8305084745763, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=39.8280802292264, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=31.7073170731707, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=31.7073170731707, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=34.9726775956284, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.4383561643836, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24585582, Length=374, Percent_Identity=36.8983957219251, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=36.4611260053619, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI28574962, Length=347, Percent_Identity=38.328530259366, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=40.495867768595, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=37.466307277628, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=36.7977528089888, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=36.7977528089888, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=36.7977528089888, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=36.7977528089888, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=36.7977528089888, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=36.7977528089888, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=36.7977528089888, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI21355075, Length=356, Percent_Identity=36.5168539325843, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=35.6770833333333, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24584994, Length=374, Percent_Identity=34.2245989304813, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24582080, Length=380, Percent_Identity=33.4210526315789, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI24582078, Length=380, Percent_Identity=33.4210526315789, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI17136248, Length=380, Percent_Identity=33.4210526315789, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI24582075, Length=380, Percent_Identity=33.4210526315789, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.9673913043478, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=35.989010989011, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=32.3287671232877, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=32.3287671232877, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=32.3287671232877, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI28571808, Length=386, Percent_Identity=32.3834196891192, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571809, Length=386, Percent_Identity=32.3834196891192, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI281365720, Length=294, Percent_Identity=39.1156462585034, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI21355559, Length=392, Percent_Identity=34.4387755102041, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=28.328611898017, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24642822, Length=380, Percent_Identity=30, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24666101, Length=374, Percent_Identity=31.283422459893, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=28.391959798995, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=31.9277108433735, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17136666, Length=413, Percent_Identity=28.8135593220339, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=29.1428571428571, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI20130173, Length=430, Percent_Identity=27.906976744186, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859659, Length=223, Percent_Identity=31.8385650224215, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571338, Length=223, Percent_Identity=31.8385650224215, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24640164, Length=365, Percent_Identity=23.2876712328767, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50754; Mature: 50623
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAA CCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCHHHEECCCCCCCHHH FALSLLHRLDPRPLDVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQV HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH ESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADRMLDMGFHDDIAFIASHAPK HHHHCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC DRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLL CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHH DHFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLV HHCCCHHEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNI EECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCC EQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEKIRPGDILGALTGEAGFTKEQ CCCCCCCEEEEEHHCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH IGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR HCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC >Mature Secondary Structure TSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAA CCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCHHHEECCCCCCCHHH FALSLLHRLDPRPLDVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQV HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH ESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADRMLDMGFHDDIAFIASHAPK HHHHCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC DRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLL CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHH DHFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLV HHCCCHHEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNI EECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCC EQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEKIRPGDILGALTGEAGFTKEQ CCCCCCCEEEEEHHCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH IGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR HCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]