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The map label for this gene is nylB [H]

Identifier: 94314202

GI number: 94314202

Start: 1982616

End: 1983968

Strand: Direct

Name: nylB [H]

Synonym: Rmet_5283

Alternate gene names: 94314202

Gene position: 1982616-1983968 (Clockwise)

Preceding gene: 94314200

Following gene: 94314204

Centisome position: 76.84

GC content: 61.94

Gene sequence:

>1353_bases
ATGGACACCGTGCCTCGCCACCGCATTCATTGGCAGCGCAAGTGCAGGGCAATCGCCACGATAGCGCTCCTCGCCGTGAC
GGGCGGGGTCGCGGCACAGTCGCTGGGCCAGAGCAACGACCGGAAGGACGTCGATGTCATGGAGGGCTTTCCGCCGTCTC
CAGCCATGCGTGTGACCAAGACCAACGCATTCCAGCCACCATATATGCGCTGGGCCTTCCGTCATGCGCGCGAGACCTCG
CCGACGGCGGGAGTTCGGCACGCTTCAACGCCAATGACTCTGCCGGAGCGGCCGGCAGCAAGTCTCGATGACGTGCAGTT
CAATGTGGAAGGACAGTCAGTCAAATTGTCCGATTACCTTCGGGACACCCACACCGATGGCTTCATCGTGCTGCACAAAG
GCCAGATTGTCTTTGAACGGTACCTGGATGGCTTCGGACCTGCGCAGCCGCACATCTGGGCGTCGATGACCAAATCGCTC
ACGGGCCTGATGGCGGCCATGCTGATCGTCGATGGCAGGCTTAACCCCGAAGCAAGGCTGGCCACCTATGTGCCTGAGTT
GGTGGGCAATCCATTCGGCGACGCCACGGTCGCGCAGAACCTCGACATGGAAGTGCCCGTCGCGTATTCGCCAGAGCTTC
CGCCCGATCTGGGATTGTTCGGCGCGGTCGGAATCATCCCGCGTCGCGCGGGTGCGCCAGACAATATCTATGACTTCCTC
AAGACCGTCTCCACCGACAAGAGGGCTGTTACGGGAGATTACTGGTTCTACCAGAACGGATCGCCGGAAGCTGTTGCATG
GGCGATGCGCAGAATCTCTGGCAAATCGTGGGCGGAACTGGCGCAGGAAACGGTCTGGTCGAAGCTGGCCCAGGACGACG
CTTACATTCAGGTCGACTCACTCGGAACAGAAATGGCAAGCGGTGGCCTGAGCACGACCTTGCGCGATGCGGCCCGTTTT
GCCGACGCAGTCCGGCGCGCGCAGGCCGGGGATGCCGACGCGGGCATTCCTGTTCAAGCTGTCCGTGCCGCATTGCACCC
GCGCGGAAACCAGGCCGGGTTCGCCACGGGCCGCCTCGCGGCTGGCCGGTCGGGCTACGCATATGGTGACTACTGGTATC
AGGTGAACGATGGCGATGGCTCCGTGGAGGCGAGCGGCCGGTTCGGGCAGAAGATCTACATCAATCCGAAAAAAGAACTG
AGCGTAGTGAAGTTCTCTTCGAGTCCTGATTCGGCGCCTCGCGGCGCTTCGGCAGAGGCGGGCAAGACTGTGGCGGCACG
CAATGGATCGCTGGAATCATCGACAGCTTTTATCGCCGCAATCCGGGCCGTCTACGGGGCCATACCGCACTAA

Upstream 100 bases:

>100_bases
GCAGGGGATTCCCATCAGTTATGACTCGATGCCCCTCGGTTTCTTGTTAGGCAGAATCCTCGCTTTCATACTCCGGAGCA
TGCTTTGCAAAGGAGAAAGA

Downstream 100 bases:

>100_bases
GCCCACCGGATCACGGGGTCAGGTGCAGCAAGACCGGCGCTCGAACCCCTGCGTGTCGACCTTATGGTGACGGTAGAGCC
GGCGACCTGGCGTTTGCGAT

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII' [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MDTVPRHRIHWQRKCRAIATIALLAVTGGVAAQSLGQSNDRKDVDVMEGFPPSPAMRVTKTNAFQPPYMRWAFRHARETS
PTAGVRHASTPMTLPERPAASLDDVQFNVEGQSVKLSDYLRDTHTDGFIVLHKGQIVFERYLDGFGPAQPHIWASMTKSL
TGLMAAMLIVDGRLNPEARLATYVPELVGNPFGDATVAQNLDMEVPVAYSPELPPDLGLFGAVGIIPRRAGAPDNIYDFL
KTVSTDKRAVTGDYWFYQNGSPEAVAWAMRRISGKSWAELAQETVWSKLAQDDAYIQVDSLGTEMASGGLSTTLRDAARF
ADAVRRAQAGDADAGIPVQAVRAALHPRGNQAGFATGRLAAGRSGYAYGDYWYQVNDGDGSVEASGRFGQKIYINPKKEL
SVVKFSSSPDSAPRGASAEAGKTVAARNGSLESSTAFIAAIRAVYGAIPH

Sequences:

>Translated_450_residues
MDTVPRHRIHWQRKCRAIATIALLAVTGGVAAQSLGQSNDRKDVDVMEGFPPSPAMRVTKTNAFQPPYMRWAFRHARETS
PTAGVRHASTPMTLPERPAASLDDVQFNVEGQSVKLSDYLRDTHTDGFIVLHKGQIVFERYLDGFGPAQPHIWASMTKSL
TGLMAAMLIVDGRLNPEARLATYVPELVGNPFGDATVAQNLDMEVPVAYSPELPPDLGLFGAVGIIPRRAGAPDNIYDFL
KTVSTDKRAVTGDYWFYQNGSPEAVAWAMRRISGKSWAELAQETVWSKLAQDDAYIQVDSLGTEMASGGLSTTLRDAARF
ADAVRRAQAGDADAGIPVQAVRAALHPRGNQAGFATGRLAAGRSGYAYGDYWYQVNDGDGSVEASGRFGQKIYINPKKEL
SVVKFSSSPDSAPRGASAEAGKTVAARNGSLESSTAFIAAIRAVYGAIPH
>Mature_450_residues
MDTVPRHRIHWQRKCRAIATIALLAVTGGVAAQSLGQSNDRKDVDVMEGFPPSPAMRVTKTNAFQPPYMRWAFRHARETS
PTAGVRHASTPMTLPERPAASLDDVQFNVEGQSVKLSDYLRDTHTDGFIVLHKGQIVFERYLDGFGPAQPHIWASMTKSL
TGLMAAMLIVDGRLNPEARLATYVPELVGNPFGDATVAQNLDMEVPVAYSPELPPDLGLFGAVGIIPRRAGAPDNIYDFL
KTVSTDKRAVTGDYWFYQNGSPEAVAWAMRRISGKSWAELAQETVWSKLAQDDAYIQVDSLGTEMASGGLSTTLRDAARF
ADAVRRAQAGDADAGIPVQAVRAALHPRGNQAGFATGRLAAGRSGYAYGDYWYQVNDGDGSVEASGRFGQKIYINPKKEL
SVVKFSSSPDSAPRGASAEAGKTVAARNGSLESSTAFIAAIRAVYGAIPH

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 48516; Mature: 48516

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVPRHRIHWQRKCRAIATIALLAVTGGVAAQSLGQSNDRKDVDVMEGFPPSPAMRVTK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEE
TNAFQPPYMRWAFRHARETSPTAGVRHASTPMTLPERPAASLDDVQFNVEGQSVKLSDYL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHH
RDTHTDGFIVLHKGQIVFERYLDGFGPAQPHIWASMTKSLTGLMAAMLIVDGRLNPEARL
HHCCCCCEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATYVPELVGNPFGDATVAQNLDMEVPVAYSPELPPDLGLFGAVGIIPRRAGAPDNIYDFL
HHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
KTVSTDKRAVTGDYWFYQNGSPEAVAWAMRRISGKSWAELAQETVWSKLAQDDAYIQVDS
HHHCCCCCEEECCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECC
LGTEMASGGLSTTLRDAARFADAVRRAQAGDADAGIPVQAVRAALHPRGNQAGFATGRLA
CCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AGRSGYAYGDYWYQVNDGDGSVEASGRFGQKIYINPKKELSVVKFSSSPDSAPRGASAEA
CCCCCCEECCEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCC
GKTVAARNGSLESSTAFIAAIRAVYGAIPH
CCEEEECCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTVPRHRIHWQRKCRAIATIALLAVTGGVAAQSLGQSNDRKDVDVMEGFPPSPAMRVTK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEE
TNAFQPPYMRWAFRHARETSPTAGVRHASTPMTLPERPAASLDDVQFNVEGQSVKLSDYL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHH
RDTHTDGFIVLHKGQIVFERYLDGFGPAQPHIWASMTKSLTGLMAAMLIVDGRLNPEARL
HHCCCCCEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATYVPELVGNPFGDATVAQNLDMEVPVAYSPELPPDLGLFGAVGIIPRRAGAPDNIYDFL
HHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
KTVSTDKRAVTGDYWFYQNGSPEAVAWAMRRISGKSWAELAQETVWSKLAQDDAYIQVDS
HHHCCCCCEEECCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECC
LGTEMASGGLSTTLRDAARFADAVRRAQAGDADAGIPVQAVRAALHPRGNQAGFATGRLA
CCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AGRSGYAYGDYWYQVNDGDGSVEASGRFGQKIYINPKKELSVVKFSSSPDSAPRGASAEA
CCCCCCEECCEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCC
GKTVAARNGSLESSTAFIAAIRAVYGAIPH
CCEEEECCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 1879421 [H]