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The map label for this gene is fliH [H]

Identifier: 94314182

GI number: 94314182

Start: 1961496

End: 1962332

Strand: Direct

Name: fliH [H]

Synonym: Rmet_5263

Alternate gene names: 94314182

Gene position: 1961496-1962332 (Clockwise)

Preceding gene: 94314181

Following gene: 94314183

Centisome position: 76.02

GC content: 70.37

Gene sequence:

>837_bases
ATGCCTACGTTTGACCGCGGTTTTTCCGCTGGCCGTGGCCCGGGCCACGGCGATCCAGGGTTCTTCGGCGCGCCCTCCAC
GGGCACAACCGGCGGCCTGACCAACCTGCACGAGAGCGACGACGGCTTCCAGGGCTTCCAGCCCCCTGCCCGTCCACGCT
CGCGCGGCGAAAGCTGGCAGCGTTGGCAAATGGAGTCGCTGGATCCACGCGATGTCCTGCGCAAGGCGCTGGCGGCGCAG
TTGCCCGCCGAGCCCCCACCGCCCCCGGCGATCGATTTCGAAGCGCTGGACGCGATGCGCGACGGCGCCCGCAAGGAGGG
CTACGCGCAGGGCTACAACCAGGGCCAGACGCAAGGTTATGGCGATGGCCACCGCGAAGGCTACGCACGCGGGCTCGAAG
CGGCACGCAATGAAGCGGCCCGCATGCAGCAGCTTGCCGCCAACTTCCGCGACGCGCTTGGCCGCGTCGACAACGATATC
TCCAACGCGCTGATCGGCCTGGCCCTGGACGTGGCCCGCCAGCTCGTGCGCAAGACCGTCGAGCTCGATCCGGCCGCATT
GCTGCCGGCTGCGCGGGAACTGCTGACCGCCGAGCCGCCGCTCTCCGGCGCGCCTTGCCTGCTGCTGAACCCGGAAGACA
TCGCGCTGGTGGAAACACACCTGAGCGGCGAACTCGAAGCCGCCGGCTGGACACTGCGGGCCGACCCGTCGATCGCGCGC
GGTGGCTGCATCGCCAGCGCCGCAAGCGGCGAGATGGACGCCAGCCTGTCCACGCGCTGGCAGCGCGTGGTCAAGGCGCT
GGGCCGCAACGATCCGTGGGAGCCGCCCCATGCATGA

Upstream 100 bases:

>100_bases
CCGGTGCGCGTGTCGCAGGTCGAGGCCGAGCAGAAGGCCATCCTGCAGGTCGTGAGACGTCTGGCCGAGGCCGGCGAAAT
CCAGATTGGCGGAGGCGACG

Downstream 100 bases:

>100_bases
CGAGCCAGCGCAGGCCACCGCGCCGGACGCCCCCGCCGCGCACGTCGGCCGCTGGCGCGACGCACTGGCAGCCGCATCGG
CCGGCGTCAGCGACATTGAC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MPTFDRGFSAGRGPGHGDPGFFGAPSTGTTGGLTNLHESDDGFQGFQPPARPRSRGESWQRWQMESLDPRDVLRKALAAQ
LPAEPPPPPAIDFEALDAMRDGARKEGYAQGYNQGQTQGYGDGHREGYARGLEAARNEAARMQQLAANFRDALGRVDNDI
SNALIGLALDVARQLVRKTVELDPAALLPAARELLTAEPPLSGAPCLLLNPEDIALVETHLSGELEAAGWTLRADPSIAR
GGCIASAASGEMDASLSTRWQRVVKALGRNDPWEPPHA

Sequences:

>Translated_278_residues
MPTFDRGFSAGRGPGHGDPGFFGAPSTGTTGGLTNLHESDDGFQGFQPPARPRSRGESWQRWQMESLDPRDVLRKALAAQ
LPAEPPPPPAIDFEALDAMRDGARKEGYAQGYNQGQTQGYGDGHREGYARGLEAARNEAARMQQLAANFRDALGRVDNDI
SNALIGLALDVARQLVRKTVELDPAALLPAARELLTAEPPLSGAPCLLLNPEDIALVETHLSGELEAAGWTLRADPSIAR
GGCIASAASGEMDASLSTRWQRVVKALGRNDPWEPPHA
>Mature_277_residues
PTFDRGFSAGRGPGHGDPGFFGAPSTGTTGGLTNLHESDDGFQGFQPPARPRSRGESWQRWQMESLDPRDVLRKALAAQL
PAEPPPPPAIDFEALDAMRDGARKEGYAQGYNQGQTQGYGDGHREGYARGLEAARNEAARMQQLAANFRDALGRVDNDIS
NALIGLALDVARQLVRKTVELDPAALLPAARELLTAEPPLSGAPCLLLNPEDIALVETHLSGELEAAGWTLRADPSIARG
GCIASAASGEMDASLSTRWQRVVKALGRNDPWEPPHA

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=170, Percent_Identity=39.4117647058824, Blast_Score=118, Evalue=5e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 29705; Mature: 29574

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFDRGFSAGRGPGHGDPGFFGAPSTGTTGGLTNLHESDDGFQGFQPPARPRSRGESWQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHH
RWQMESLDPRDVLRKALAAQLPAEPPPPPAIDFEALDAMRDGARKEGYAQGYNQGQTQGY
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GDGHREGYARGLEAARNEAARMQQLAANFRDALGRVDNDISNALIGLALDVARQLVRKTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDPAALLPAARELLTAEPPLSGAPCLLLNPEDIALVETHLSGELEAAGWTLRADPSIAR
HCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHCCCCCHHCCEEEECCCCCCC
GGCIASAASGEMDASLSTRWQRVVKALGRNDPWEPPHA
CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PTFDRGFSAGRGPGHGDPGFFGAPSTGTTGGLTNLHESDDGFQGFQPPARPRSRGESWQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHH
RWQMESLDPRDVLRKALAAQLPAEPPPPPAIDFEALDAMRDGARKEGYAQGYNQGQTQGY
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GDGHREGYARGLEAARNEAARMQQLAANFRDALGRVDNDISNALIGLALDVARQLVRKTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDPAALLPAARELLTAEPPLSGAPCLLLNPEDIALVETHLSGELEAAGWTLRADPSIAR
HCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHCCCCCHHCCEEEECCCCCCC
GGCIASAASGEMDASLSTRWQRVVKALGRNDPWEPPHA
CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646201; 11677609; 2656645 [H]