| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314176
Identifier: 94314176
GI number: 94314176
Start: 1956442
End: 1957785
Strand: Direct
Name: 94314176
Synonym: Rmet_5257
Alternate gene names: NA
Gene position: 1956442-1957785 (Clockwise)
Preceding gene: 94314175
Following gene: 94314177
Centisome position: 75.83
GC content: 68.38
Gene sequence:
>1344_bases ATGTCGATTCCGATTCATTCCCAGCCTGACGCTGGCCAGCTCGCACGTAACGACCTGCTGACACAGCGCACGGCGCTGGC GGTCGACAAGCTGGCCGCGCTGATGCCGGTCCAGGACACGAACGAGACCAGTTCGCGTGACACCAGCACCGATCTCGGCA CCGCTGGCCGCGTGCCCGGTGCGCGGCCCGGCGAAGCATCGGCCGGCAATACCGCCGGCGCCGTCGTCACTTCGACGCGC GAAACGCTGAGCTTCGCAGCGCGCACGATCCTCGACCTGTTCGCGAATGCCGACGAGGCCGCCGCCGCGCTAAAGTCGAC CACACCACTCGCCACGCGCACGGAAATGCAATCCGCGCCGCTGCTGGCCACCAAGCTTGCCAGCCTGCTCGACCAGAGCG GCATGTTTTATGAAGCGCATCTCGCCGAATGGGTGAGCGGAGCGCGTACGCTCAAGGACATCGCACGCGAGCCCCAGGCC GTGCTGGCACGCGCCACCGCCAACGGCGCCAACCCGCCCGCTCCTGATGAGCCACTGCGCCAGCTGCTGGCGCTGCCCTA TTCACCTCGGGCCGCCGATGCGGCGCGTGCGACGATGCTTGCTGCCGTGGACCTTCCCGACGCACCGGATGGCGACGCCA CCGGCCGGGCGGGAAACACCGCACATGGCGCGGGTACTGCCAACGGAACGGGCAGCGCAGGCGGCATGGCCGCGAATCGC GCCGCGGAGGTTTCGTCATTCGGCCGTCACCCGCCGGTCACCCGCACCATCACCGTCGGCGATCCGATTCCCGCACCCGA CGGCGCACGCACGCAATCGCTGCAGGCAGCCCAGTCGTATGCCAGCGTTGCCGACGCGGGCAACGCGCCACGCGCGTCTC TGCTGGCCACGCATGCGTCGTCGTCCGAACCGCCCGCCGCACCGCCCCCAGCGCAAGGCCAGATCGTGCACCCGGCGACA GAGGGCCTGATGCGCCAGCAACTCGAACTGCTGGCCGCCCAGCAGTTCCGCTGGCAAGGTGAAGCCTGGTCAGGTACGCA GATGTCATGGGAAGTGTCGCCGAATCCGGTCGACGAGGATGGATCCGGCACGCAGCACCAGGCGCGGAGCTGGACCACAC GGCTGGTCGTGCAGATGCCAGGCATGGGCATGGTCGAAGCCAGTGTGACGCTATCGCCATCGATGCTGGACGTGCGAGTC AATGCGCCGCTGGATGACACTGTCGCAAGACTTAGCGCAGCCATTCCCGATCTGCACGGGCGTCTGGCGGCCAGCGGCTT CGTGGTGGGCCAGATCACGGCACGCGCCGATACGGCGCCAACGGAAGCGGGAGTCCCGTCATGA
Upstream 100 bases:
>100_bases AGAGATTCGCTGAGAGATACGTTCACAGGGCGCCCCGCGCGGCGCCAATGCGGCGCCTTGAGCTCATGCATCCGTAACGC CCCATGTCACGGCCCGTTCC
Downstream 100 bases:
>100_bases GCGACACGTCGCGCGGCGCCGCGGTGGCGCTGTCATATGAAGAAGGCGAGAAGGCCCCACGCGTGGTGGCCAAGGGCTAC GGCGTCACGGCCGAATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSIPIHSQPDAGQLARNDLLTQRTALAVDKLAALMPVQDTNETSSRDTSTDLGTAGRVPGARPGEASAGNTAGAVVTSTR ETLSFAARTILDLFANADEAAAALKSTTPLATRTEMQSAPLLATKLASLLDQSGMFYEAHLAEWVSGARTLKDIAREPQA VLARATANGANPPAPDEPLRQLLALPYSPRAADAARATMLAAVDLPDAPDGDATGRAGNTAHGAGTANGTGSAGGMAANR AAEVSSFGRHPPVTRTITVGDPIPAPDGARTQSLQAAQSYASVADAGNAPRASLLATHASSSEPPAAPPPAQGQIVHPAT EGLMRQQLELLAAQQFRWQGEAWSGTQMSWEVSPNPVDEDGSGTQHQARSWTTRLVVQMPGMGMVEASVTLSPSMLDVRV NAPLDDTVARLSAAIPDLHGRLAASGFVVGQITARADTAPTEAGVPS
Sequences:
>Translated_447_residues MSIPIHSQPDAGQLARNDLLTQRTALAVDKLAALMPVQDTNETSSRDTSTDLGTAGRVPGARPGEASAGNTAGAVVTSTR ETLSFAARTILDLFANADEAAAALKSTTPLATRTEMQSAPLLATKLASLLDQSGMFYEAHLAEWVSGARTLKDIAREPQA VLARATANGANPPAPDEPLRQLLALPYSPRAADAARATMLAAVDLPDAPDGDATGRAGNTAHGAGTANGTGSAGGMAANR AAEVSSFGRHPPVTRTITVGDPIPAPDGARTQSLQAAQSYASVADAGNAPRASLLATHASSSEPPAAPPPAQGQIVHPAT EGLMRQQLELLAAQQFRWQGEAWSGTQMSWEVSPNPVDEDGSGTQHQARSWTTRLVVQMPGMGMVEASVTLSPSMLDVRV NAPLDDTVARLSAAIPDLHGRLAASGFVVGQITARADTAPTEAGVPS >Mature_446_residues SIPIHSQPDAGQLARNDLLTQRTALAVDKLAALMPVQDTNETSSRDTSTDLGTAGRVPGARPGEASAGNTAGAVVTSTRE TLSFAARTILDLFANADEAAAALKSTTPLATRTEMQSAPLLATKLASLLDQSGMFYEAHLAEWVSGARTLKDIAREPQAV LARATANGANPPAPDEPLRQLLALPYSPRAADAARATMLAAVDLPDAPDGDATGRAGNTAHGAGTANGTGSAGGMAANRA AEVSSFGRHPPVTRTITVGDPIPAPDGARTQSLQAAQSYASVADAGNAPRASLLATHASSSEPPAAPPPAQGQIVHPATE GLMRQQLELLAAQQFRWQGEAWSGTQMSWEVSPNPVDEDGSGTQHQARSWTTRLVVQMPGMGMVEASVTLSPSMLDVRVN APLDDTVARLSAAIPDLHGRLAASGFVVGQITARADTAPTEAGVPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45919; Mature: 45787
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPIHSQPDAGQLARNDLLTQRTALAVDKLAALMPVQDTNETSSRDTSTDLGTAGRVPG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ARPGEASAGNTAGAVVTSTRETLSFAARTILDLFANADEAAAALKSTTPLATRTEMQSAP CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCC LLATKLASLLDQSGMFYEAHLAEWVSGARTLKDIAREPQAVLARATANGANPPAPDEPLR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHH QLLALPYSPRAADAARATMLAAVDLPDAPDGDATGRAGNTAHGAGTANGTGSAGGMAANR HHHHCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AAEVSSFGRHPPVTRTITVGDPIPAPDGARTQSLQAAQSYASVADAGNAPRASLLATHAS HHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCC SSEPPAAPPPAQGQIVHPATEGLMRQQLELLAAQQFRWQGEAWSGTQMSWEVSPNPVDED CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC GSGTQHQARSWTTRLVVQMPGMGMVEASVTLSPSMLDVRVNAPLDDTVARLSAAIPDLHG CCCCHHHHHHHHEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHH RLAASGFVVGQITARADTAPTEAGVPS HHHHCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SIPIHSQPDAGQLARNDLLTQRTALAVDKLAALMPVQDTNETSSRDTSTDLGTAGRVPG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ARPGEASAGNTAGAVVTSTRETLSFAARTILDLFANADEAAAALKSTTPLATRTEMQSAP CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCC LLATKLASLLDQSGMFYEAHLAEWVSGARTLKDIAREPQAVLARATANGANPPAPDEPLR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHH QLLALPYSPRAADAARATMLAAVDLPDAPDGDATGRAGNTAHGAGTANGTGSAGGMAANR HHHHCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AAEVSSFGRHPPVTRTITVGDPIPAPDGARTQSLQAAQSYASVADAGNAPRASLLATHAS HHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCC SSEPPAAPPPAQGQIVHPATEGLMRQQLELLAAQQFRWQGEAWSGTQMSWEVSPNPVDED CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC GSGTQHQARSWTTRLVVQMPGMGMVEASVTLSPSMLDVRVNAPLDDTVARLSAAIPDLHG CCCCHHHHHHHHEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHH RLAASGFVVGQITARADTAPTEAGVPS HHHHCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA