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The map label for this gene is fliC2 [H]

Identifier: 94314171

GI number: 94314171

Start: 1952310

End: 1953506

Strand: Direct

Name: fliC2 [H]

Synonym: Rmet_5252

Alternate gene names: 94314171

Gene position: 1952310-1953506 (Clockwise)

Preceding gene: 94314170

Following gene: 94314172

Centisome position: 75.67

GC content: 62.07

Gene sequence:

>1197_bases
ATGGCGCAAGTCATTAATACCAACTCGTTGTCTCTGATGACTCAGAACAACCTGAACACGTCGCAATCGGCGCTGAACAC
CGCCATTCAGCGACTGTCGTCGGGTCTGCGCATCAACAGCGCAAAGGACGATGCAGCCGGCCTGGCCATCGCCAGCCGCT
TCACGTCGAACATCAACGGCCTGACCGTTGCCCAGCGTAACGCCAACGACGGCATCTCGCTGGCGCAAACGACGGAAGGC
GCGCTGACCGAAGTCACGAACAACCTGCAGCGTATCCGCGACCTGTCGGTGCAAGCCGCCAACGGTTCGAACTCGGCTTC
GGACCTGAAGTCGATCCAGGACGAAATCACGCAGCGTATGTCGGAAATCGACCGCCTGTCGGCCCAGACCGACTTCAACG
GCGTGAAGGTGCTGTCGTCGACCGCCAAGAGCGTGAACATTCAGGTTGGCGCGCAAGACGGCCAGACCATCGCTGTGAAC
CTGCAGGAAATCAGCACGAAGACGCTGGGCCTGAACAGCTTCAACGTGAACGGCCCGCAAGGCGCCGTCACCGCCGCCAC
CGCTGCCAACTTCCAGAAGGTCTTCGGTAGCTCCACCACGTTCACGACGTCGTCGATCACGGAAGCCGTCGGCGGCACGC
TGGCCACGACCCTGGGTATCAGCTCGAGCAGCGTGGCCATCGGCAACCAGGCCATGGTTGACGCGAACGGCAACTGGTTC
GCACAAGTCACCGTCACGCCGGCGTCGGCCACGGAAGCTCAGGCACTGAAGAACCAGGGCATGACCACCGCAACCAGCGG
CTCGGCCATGACCATGTACGTTGCACTGAACCCGAACTCGACGACGAGCACGACGGGCGCGACGGCATCGTTCACGCTGA
ACACCACTGGCGTGACCGCTTCCACCCTGACGGGCAGCGCCTCGGCCAACCCGCTGGCCACGCTCGACAACGCCCTGCAA
ACGGTGAACAGCCTGCGCAGCTCGCTGGGTGCTATCCAGAACCGTCTGGATTCGACGATCTCGAACCTGGGCACGACCAT
CACCAACCTGTCGTCGTCGCGCTCGCGCATTCAGGATGCTGACTACGCAACGGAAGTGTCGAACATGACCCGCGCGAACA
TCCTGCAACAAGCTGGTACCTCGGTGCTGGCTCAAGCGAACCAGACCACGCAAGGCGTGCTGTCGCTGCTGCGTTAA

Upstream 100 bases:

>100_bases
ATAACCTTTGCAACGGAGGCACTCTACGCCCTGCAACGCAGGCAGCCAACGTTACGGCACCCGCCGGAATGCCTAAAACA
TTGCAAATAGGAGTCGTACC

Downstream 100 bases:

>100_bases
TCGCACCGCGTAAGCAGGAAGGCCGGACCTCGTGTCCGGCTTTCTTGCGCCCGGAGTATTTCCCCAGGGCTTCGGCTCTG
GGAAAACATTTCGAGATGAC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MAQVINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNINGLTVAQRNANDGISLAQTTEG
ALTEVTNNLQRIRDLSVQAANGSNSASDLKSIQDEITQRMSEIDRLSAQTDFNGVKVLSSTAKSVNIQVGAQDGQTIAVN
LQEISTKTLGLNSFNVNGPQGAVTAATAANFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWF
AQVTVTPASATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTASTLTGSASANPLATLDNALQ
TVNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR

Sequences:

>Translated_398_residues
MAQVINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNINGLTVAQRNANDGISLAQTTEG
ALTEVTNNLQRIRDLSVQAANGSNSASDLKSIQDEITQRMSEIDRLSAQTDFNGVKVLSSTAKSVNIQVGAQDGQTIAVN
LQEISTKTLGLNSFNVNGPQGAVTAATAANFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWF
AQVTVTPASATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTASTLTGSASANPLATLDNALQ
TVNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR
>Mature_397_residues
AQVINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNINGLTVAQRNANDGISLAQTTEGA
LTEVTNNLQRIRDLSVQAANGSNSASDLKSIQDEITQRMSEIDRLSAQTDFNGVKVLSSTAKSVNIQVGAQDGQTIAVNL
QEISTKTLGLNSFNVNGPQGAVTAATAANFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWFA
QVTVTPASATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTASTLTGSASANPLATLDNALQT
VNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=200, Percent_Identity=65, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40937; Mature: 40805

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNING
CCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCC
LTVAQRNANDGISLAQTTEGALTEVTNNLQRIRDLSVQAANGSNSASDLKSIQDEITQRM
EEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
SEIDRLSAQTDFNGVKVLSSTAKSVNIQVGAQDGQTIAVNLQEISTKTLGLNSFNVNGPQ
HHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHCHHEECCCCCCCCCCC
GAVTAATAANFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWF
CCEEHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHCCCCCCCEEECCEEEEECCCCEE
AQVTVTPASATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTA
EEEEECCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEE
STLTGSASANPLATLDNALQTVNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR
HHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHC
>Mature Secondary Structure 
AQVINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNING
CEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCC
LTVAQRNANDGISLAQTTEGALTEVTNNLQRIRDLSVQAANGSNSASDLKSIQDEITQRM
EEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
SEIDRLSAQTDFNGVKVLSSTAKSVNIQVGAQDGQTIAVNLQEISTKTLGLNSFNVNGPQ
HHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHCHHEECCCCCCCCCCC
GAVTAATAANFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWF
CCEEHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHCCCCCCCEEECCEEEEECCCCEE
AQVTVTPASATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTA
EEEEECCCCCHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEE
STLTGSASANPLATLDNALQTVNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR
HHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]