Click here to switch to the map view.

The map label for this gene is 94314158

Identifier: 94314158

GI number: 94314158

Start: 1937944

End: 1938723

Strand: Direct

Name: 94314158

Synonym: Rmet_5239

Alternate gene names: NA

Gene position: 1937944-1938723 (Clockwise)

Preceding gene: 94314157

Following gene: 94314159

Centisome position: 75.11

GC content: 59.87

Gene sequence:

>780_bases
ATGAACACGAACCTTGCCAGGCACGAAGCCGAACTCGAATCCCAGGGTTGGACAGTGGTCCCGCGACTGATCCATGAGGA
ACTCGTCGGCGCGCTGAACCACGCCCTTGTTCCGTCGCTGAACAAGCGTGACGCGATCCGCACGGCAAATGGTCTGATGG
AAAACTGTCAGGGCACCGCTCACCACGTGCTTTCCGACGACCGCTGCTATGTCGAACTGCTGGCGAAATTCGAAGCGCTC
GATCCCATCGTCAAATGGTTCTTCGGCGGCAACTACATCCTGAACTCGTACGGCGGCTTCATCAACGACGGCAAGACCTA
CGCCCACGACGTTCACAGGGATATCCGCTTTCATTCGAACGCCAAGCGCTTCATGCTGAATACGCTGGTGATGCTCGACG
AGTTCACCGAGCCGAATGGCGCGACCCATATTCTTTCCGGTTCCCAGCATCAGCCCGAGAGGCCGTCCAACGACACGTTC
TTTCGTGATGCGGCGCGCGTGACAGGCGAGCGCGGCTCGGTCTTGCTGTTCGACTCCCGAATCTGGCACGCCGCCGGAGA
GAACACGACAAATCTTCCCAGAAGGGCGTTGACGCTGACGTTCACCTGCCCCTTCTTCAAACCGCAGCTCGACTATCCGA
GGCTCATGGCCAGCTCCGGCGTCTCGACCCTCACGCCATTCCTCCGGCAGGTGATCGGTTTCAACGCCCGGGTGCCCGCG
TCCCTCGAGGAGTTCTACGTACCGGTCGAGCAGCGCTTCTATCAACGCGGACAGGACTGA

Upstream 100 bases:

>100_bases
TGCGACCAGCGTCTTTCGCCCGAGCAGTTGGCTCCGCTTGCCCGGCAGGTCCTGGAGTACCGCGACCGTCAATGATGGTC
CCGAATTGACAAACATATTC

Downstream 100 bases:

>100_bases
CATCATGAGCCGAGATTACAACGCCGAAGCCAAGGACCATCCCGAACACAGCTACGCCTACGCCTTCGACTACCTGATGC
ATGAGTACATGCTCAAGACG

Product: putative dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNTNLARHEAELESQGWTVVPRLIHEELVGALNHALVPSLNKRDAIRTANGLMENCQGTAHHVLSDDRCYVELLAKFEAL
DPIVKWFFGGNYILNSYGGFINDGKTYAHDVHRDIRFHSNAKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTF
FRDAARVTGERGSVLLFDSRIWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPFLRQVIGFNARVPA
SLEEFYVPVEQRFYQRGQD

Sequences:

>Translated_259_residues
MNTNLARHEAELESQGWTVVPRLIHEELVGALNHALVPSLNKRDAIRTANGLMENCQGTAHHVLSDDRCYVELLAKFEAL
DPIVKWFFGGNYILNSYGGFINDGKTYAHDVHRDIRFHSNAKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTF
FRDAARVTGERGSVLLFDSRIWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPFLRQVIGFNARVPA
SLEEFYVPVEQRFYQRGQD
>Mature_259_residues
MNTNLARHEAELESQGWTVVPRLIHEELVGALNHALVPSLNKRDAIRTANGLMENCQGTAHHVLSDDRCYVELLAKFEAL
DPIVKWFFGGNYILNSYGGFINDGKTYAHDVHRDIRFHSNAKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTF
FRDAARVTGERGSVLLFDSRIWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPFLRQVIGFNARVPA
SLEEFYVPVEQRFYQRGQD

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 29381; Mature: 29381

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNLARHEAELESQGWTVVPRLIHEELVGALNHALVPSLNKRDAIRTANGLMENCQGTA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
HHVLSDDRCYVELLAKFEALDPIVKWFFGGNYILNSYGGFINDGKTYAHDVHRDIRFHSN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCC
AKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTFFRDAARVTGERGSVLLFDSR
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECC
IWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPFLRQVIGFNARVPA
EEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC
SLEEFYVPVEQRFYQRGQD
CHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MNTNLARHEAELESQGWTVVPRLIHEELVGALNHALVPSLNKRDAIRTANGLMENCQGTA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
HHVLSDDRCYVELLAKFEALDPIVKWFFGGNYILNSYGGFINDGKTYAHDVHRDIRFHSN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCC
AKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTFFRDAARVTGERGSVLLFDSR
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECC
IWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPFLRQVIGFNARVPA
EEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC
SLEEFYVPVEQRFYQRGQD
CHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]