Click here to switch to the map view.

The map label for this gene is 94314154

Identifier: 94314154

GI number: 94314154

Start: 1932692

End: 1935085

Strand: Direct

Name: 94314154

Synonym: Rmet_5235

Alternate gene names: NA

Gene position: 1932692-1935085 (Clockwise)

Preceding gene: 94314153

Following gene: 94314155

Centisome position: 74.91

GC content: 62.66

Gene sequence:

>2394_bases
ATGCCCATGTCCTTGTCCTTGTCCAGTCCCGAAGTCTCGGAAGTCCTACCTCAGGCGCAGCAGCAGGAGCAGGATGTCCT
GCTGATTCTGCAAAGCGCTCTTGAGTTACAGCAAGCCGGCGCTTATGAGGATGCGCGGGCCCTGTACGAGATCATCATCG
GCGCCGTGCCAATGCACGCCGATGCCCAATATGGCTACGCGATGCTCAAGGTGCAGATGGGCGAACCGGCGGACTCGCTG
CGTAACTTCGAGGTCGCCCTCGGCCTCAGCCCCGACAACCGGCACTATTGGGTCAACTACATCAGCGCGCTGTTCCAGAG
CGGCCAGGCATCCGCTGCCTGGATCGCACTCGATCTCGCGCAGCAGCGCGGGGTCAAGGGCCCCGACCTCGATTGGCTGA
TCACGCAAATGGCGCGGTCGAATGCGTCGCCGGCGCCGGCTGCTGTGGCAATGCCTGCCACCACACCCAATGGCACCACG
CCGGCCGCCACGCCTGGCGCCCCGGATCAAGCCGTCGGCAACGCATCCGGCACAGCCACCGCGAGCGGCGACAAGCGCAA
GGCGCCATCCTCGAAAGTGAACAAGGTCAACGCCTTGATCCAGGACCGGCAACTTGAGGAAGCGATAGCGTATGCCCGCG
GCCTGACGGCCGAGTACCCGTCAGATGGCACGGCATGGGGCGCACTCGGCCTTGCCCTGCATCAGGTAGGACACTTTCAG
GATATCGTCGACGCAGCCAGTCGCTCGGTGGAACTGCAGCCCAACGACCTGGTGATCCGCAGACTGCTTGCCAACGCATT
ACGCGAAATCGGCCGCCTGTCGGAATCCGAAGCACATTGCCGCCACATTCTCTCGACGGCCCCGGACGACGCCAACACAC
TATGGCACCTCGGGAGCGTACTGCACTGCCAGAAGCGGTATGACGAAGCGGCCGTCGCTGGCCGGCGTGCTGTCGAACTT
GCGCCCAATAACGCGCTGGCCCACCTCAGCTTCGGCATGGTGCAGATCGACAGGGGCCAGGTAGCCGAGGCCCTTGGGCA
TCTGCAAACGGCGATTGAGCTTGACTCGAACAATACCAAGAACAACAGTGCCGTTCTGTTCCGCCTGACCCACTGCGATG
CCATTGATACGGCAACCCTGACCGAAGCGCATTTCGCCTATGGCAAGCGGAACGCGATCCGGACCAGCCCGAAGCGGCAC
GCGAACGTCCCCGACCCCCGTCGAAAGCTCCGGATCGGGCTTGTATCCGGTGATCTCTACAACCATGCTGTCAGTACGTA
TCTTGGGGCCGTTGTCGAGTATCTGGCGAAGGACCCGAGTGTCTCGCTGCACTTCTACTACAACTTCACGATCGAAGACG
AGGTCACCAGTTTCCTGCAAGCGCACGCGGCATCGTGGACGGTCGTGACCAGGATGAACGATGTCGGCTTTGCCGCGACG
GTCCGCCGCGATGAGATCGACATCCTGATCGACCTGTCAGGCCATACGAACCACAATCGCTTGCCTGCGTTCGCTCGGAA
ACCTGCGCCAATCCAGGTGACATGGCTTGGATATCCGGCGACGACCGGACTCGACGCCATGGACTATTTCCTGGCCGACC
GCCACAGCACACCACCAGGACTATTTGACGCGCAGTTCAGCGAGAAGATCGTCCTGCTGCCAGCAGTCGCGCCCTATTGC
CCGACTGCCGCCTCCCCACCTGTCAACACCCTGCCTGCCCTGCACAAGGGTTACATCACCTACGGCAGCTTCAATCGGCT
GAACAAGGTAAGCCGGCAGGTCGTCGCGCTCTGGGCAAGAATCCTGCACGCAGACCCGAGCGCGCGAATGATCATCGGTG
CCATCGAGGGCGATGCAGACCAGCAGACCTGTCTCACCAGGTTTGCCGATGAAGGCATCGACGCCGGGCGCCTGTCGTTC
CGTACCCGGACCGAGACACCGGTGTACCTCCAGCAGCACCATCACGTCGACATCTGCCTTGACACGTTCCCCTACACCGG
GGCAACCACGACAATCAATGCGCTATGGATGGGCGTACCCACGGTAACCATCGCAGGCAACAGCCCGCTGAGCCGCGGCA
GCGCTAGCTGGCTCGGTCAGCTAGGACTCCATCAGTACATCGCGAACGACGCAGACGACTTCGTCCAACGCGCGCTTGCC
CTGTCGAAGGACCTGGATGCGTTGAAGCAGCTACGCGCCACCCTGCGCGAGCGTTGCATGCACGCGACGTCGATCCAGCC
CGCGAACGTCGCGTCCAGCCTGTCCCTTGCGCTACGCGCGATGTGGGAACGCTGGTGCGCGGGCCAGGCGCCCGATAGCT
TCGAAATCGAACCGGTTCAGAACACGGTTGCACCCGCCGCAGCCAGCGAGCACGCGCTCCAGCCCGTCACGTAA

Upstream 100 bases:

>100_bases
CTGAACGACCCCAATTCGAATTGACTGATTTTTTGGCTTCTCCTCCGTACTTTAGTCAGTAGAGGCAGGACGCATCATGC
TGGCGTAATCCGTCCAGGCG

Downstream 100 bases:

>100_bases
GGATCAGCGACCATGACAGCCAGCCTTCCGTCGGAATCCGTGCGCGCCCTGCTCGAGGACCGCATCTACGTCACCCAGCC
ACACCTGCCTCCGCTCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Methyltransferase Type; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein; Glycosyl Transferase; TPR Repeat-Containing SPINDLY Family Protein

Number of amino acids: Translated: 797; Mature: 796

Protein sequence:

>797_residues
MPMSLSLSSPEVSEVLPQAQQQEQDVLLILQSALELQQAGAYEDARALYEIIIGAVPMHADAQYGYAMLKVQMGEPADSL
RNFEVALGLSPDNRHYWVNYISALFQSGQASAAWIALDLAQQRGVKGPDLDWLITQMARSNASPAPAAVAMPATTPNGTT
PAATPGAPDQAVGNASGTATASGDKRKAPSSKVNKVNALIQDRQLEEAIAYARGLTAEYPSDGTAWGALGLALHQVGHFQ
DIVDAASRSVELQPNDLVIRRLLANALREIGRLSESEAHCRHILSTAPDDANTLWHLGSVLHCQKRYDEAAVAGRRAVEL
APNNALAHLSFGMVQIDRGQVAEALGHLQTAIELDSNNTKNNSAVLFRLTHCDAIDTATLTEAHFAYGKRNAIRTSPKRH
ANVPDPRRKLRIGLVSGDLYNHAVSTYLGAVVEYLAKDPSVSLHFYYNFTIEDEVTSFLQAHAASWTVVTRMNDVGFAAT
VRRDEIDILIDLSGHTNHNRLPAFARKPAPIQVTWLGYPATTGLDAMDYFLADRHSTPPGLFDAQFSEKIVLLPAVAPYC
PTAASPPVNTLPALHKGYITYGSFNRLNKVSRQVVALWARILHADPSARMIIGAIEGDADQQTCLTRFADEGIDAGRLSF
RTRTETPVYLQQHHHVDICLDTFPYTGATTTINALWMGVPTVTIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALA
LSKDLDALKQLRATLRERCMHATSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQNTVAPAAASEHALQPVT

Sequences:

>Translated_797_residues
MPMSLSLSSPEVSEVLPQAQQQEQDVLLILQSALELQQAGAYEDARALYEIIIGAVPMHADAQYGYAMLKVQMGEPADSL
RNFEVALGLSPDNRHYWVNYISALFQSGQASAAWIALDLAQQRGVKGPDLDWLITQMARSNASPAPAAVAMPATTPNGTT
PAATPGAPDQAVGNASGTATASGDKRKAPSSKVNKVNALIQDRQLEEAIAYARGLTAEYPSDGTAWGALGLALHQVGHFQ
DIVDAASRSVELQPNDLVIRRLLANALREIGRLSESEAHCRHILSTAPDDANTLWHLGSVLHCQKRYDEAAVAGRRAVEL
APNNALAHLSFGMVQIDRGQVAEALGHLQTAIELDSNNTKNNSAVLFRLTHCDAIDTATLTEAHFAYGKRNAIRTSPKRH
ANVPDPRRKLRIGLVSGDLYNHAVSTYLGAVVEYLAKDPSVSLHFYYNFTIEDEVTSFLQAHAASWTVVTRMNDVGFAAT
VRRDEIDILIDLSGHTNHNRLPAFARKPAPIQVTWLGYPATTGLDAMDYFLADRHSTPPGLFDAQFSEKIVLLPAVAPYC
PTAASPPVNTLPALHKGYITYGSFNRLNKVSRQVVALWARILHADPSARMIIGAIEGDADQQTCLTRFADEGIDAGRLSF
RTRTETPVYLQQHHHVDICLDTFPYTGATTTINALWMGVPTVTIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALA
LSKDLDALKQLRATLRERCMHATSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQNTVAPAAASEHALQPVT
>Mature_796_residues
PMSLSLSSPEVSEVLPQAQQQEQDVLLILQSALELQQAGAYEDARALYEIIIGAVPMHADAQYGYAMLKVQMGEPADSLR
NFEVALGLSPDNRHYWVNYISALFQSGQASAAWIALDLAQQRGVKGPDLDWLITQMARSNASPAPAAVAMPATTPNGTTP
AATPGAPDQAVGNASGTATASGDKRKAPSSKVNKVNALIQDRQLEEAIAYARGLTAEYPSDGTAWGALGLALHQVGHFQD
IVDAASRSVELQPNDLVIRRLLANALREIGRLSESEAHCRHILSTAPDDANTLWHLGSVLHCQKRYDEAAVAGRRAVELA
PNNALAHLSFGMVQIDRGQVAEALGHLQTAIELDSNNTKNNSAVLFRLTHCDAIDTATLTEAHFAYGKRNAIRTSPKRHA
NVPDPRRKLRIGLVSGDLYNHAVSTYLGAVVEYLAKDPSVSLHFYYNFTIEDEVTSFLQAHAASWTVVTRMNDVGFAATV
RRDEIDILIDLSGHTNHNRLPAFARKPAPIQVTWLGYPATTGLDAMDYFLADRHSTPPGLFDAQFSEKIVLLPAVAPYCP
TAASPPVNTLPALHKGYITYGSFNRLNKVSRQVVALWARILHADPSARMIIGAIEGDADQQTCLTRFADEGIDAGRLSFR
TRTETPVYLQQHHHVDICLDTFPYTGATTTINALWMGVPTVTIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALAL
SKDLDALKQLRATLRERCMHATSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQNTVAPAAASEHALQPVT

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=419, Percent_Identity=24.582338902148, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI32307150, Length=419, Percent_Identity=24.582338902148, Blast_Score=106, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI115532690, Length=416, Percent_Identity=25.7211538461538, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI115532692, Length=416, Percent_Identity=25.7211538461538, Blast_Score=103, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17647755, Length=412, Percent_Identity=24.5145631067961, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24585827, Length=412, Percent_Identity=24.5145631067961, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24585829, Length=412, Percent_Identity=24.5145631067961, Blast_Score=100, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86442; Mature: 86311

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSLSLSSPEVSEVLPQAQQQEQDVLLILQSALELQQAGAYEDARALYEIIIGAVPMHA
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
DAQYGYAMLKVQMGEPADSLRNFEVALGLSPDNRHYWVNYISALFQSGQASAAWIALDLA
CCCCCEEEEEEECCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHH
QQRGVKGPDLDWLITQMARSNASPAPAAVAMPATTPNGTTPAATPGAPDQAVGNASGTAT
HHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCC
ASGDKRKAPSSKVNKVNALIQDRQLEEAIAYARGLTAEYPSDGTAWGALGLALHQVGHFQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
DIVDAASRSVELQPNDLVIRRLLANALREIGRLSESEAHCRHILSTAPDDANTLWHLGSV
HHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
LHCQKRYDEAAVAGRRAVELAPNNALAHLSFGMVQIDRGQVAEALGHLQTAIELDSNNTK
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEECEEEECCHHHHHHHHHHHHEEEECCCCCC
NNSAVLFRLTHCDAIDTATLTEAHFAYGKRNAIRTSPKRHANVPDPRRKLRIGLVSGDLY
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHEEEEEEEECHHH
NHAVSTYLGAVVEYLAKDPSVSLHFYYNFTIEDEVTSFLQAHAASWTVVTRMNDVGFAAT
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEE
VRRDEIDILIDLSGHTNHNRLPAFARKPAPIQVTWLGYPATTGLDAMDYFLADRHSTPPG
EECCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCC
LFDAQFSEKIVLLPAVAPYCPTAASPPVNTLPALHKGYITYGSFNRLNKVSRQVVALWAR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHH
ILHADPSARMIIGAIEGDADQQTCLTRFADEGIDAGRLSFRTRTETPVYLQQHHHVDICL
HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCEEEEE
DTFPYTGATTTINALWMGVPTVTIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALA
ECCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LSKDLDALKQLRATLRERCMHATSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCH
NTVAPAAASEHALQPVT
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMSLSLSSPEVSEVLPQAQQQEQDVLLILQSALELQQAGAYEDARALYEIIIGAVPMHA
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
DAQYGYAMLKVQMGEPADSLRNFEVALGLSPDNRHYWVNYISALFQSGQASAAWIALDLA
CCCCCEEEEEEECCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHH
QQRGVKGPDLDWLITQMARSNASPAPAAVAMPATTPNGTTPAATPGAPDQAVGNASGTAT
HHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCC
ASGDKRKAPSSKVNKVNALIQDRQLEEAIAYARGLTAEYPSDGTAWGALGLALHQVGHFQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
DIVDAASRSVELQPNDLVIRRLLANALREIGRLSESEAHCRHILSTAPDDANTLWHLGSV
HHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
LHCQKRYDEAAVAGRRAVELAPNNALAHLSFGMVQIDRGQVAEALGHLQTAIELDSNNTK
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEECEEEECCHHHHHHHHHHHHEEEECCCCCC
NNSAVLFRLTHCDAIDTATLTEAHFAYGKRNAIRTSPKRHANVPDPRRKLRIGLVSGDLY
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHEEEEEEEECHHH
NHAVSTYLGAVVEYLAKDPSVSLHFYYNFTIEDEVTSFLQAHAASWTVVTRMNDVGFAAT
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEE
VRRDEIDILIDLSGHTNHNRLPAFARKPAPIQVTWLGYPATTGLDAMDYFLADRHSTPPG
EECCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCC
LFDAQFSEKIVLLPAVAPYCPTAASPPVNTLPALHKGYITYGSFNRLNKVSRQVVALWAR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHH
ILHADPSARMIIGAIEGDADQQTCLTRFADEGIDAGRLSFRTRTETPVYLQQHHHVDICL
HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCEEEEE
DTFPYTGATTTINALWMGVPTVTIAGNSPLSRGSASWLGQLGLHQYIANDADDFVQRALA
ECCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LSKDLDALKQLRATLRERCMHATSIQPANVASSLSLALRAMWERWCAGQAPDSFEIEPVQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCH
NTVAPAAASEHALQPVT
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA