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The map label for this gene is omp32 [H]

Identifier: 94314114

GI number: 94314114

Start: 1889822

End: 1890970

Strand: Direct

Name: omp32 [H]

Synonym: Rmet_5195

Alternate gene names: 94314114

Gene position: 1889822-1890970 (Clockwise)

Preceding gene: 94314108

Following gene: 94314115

Centisome position: 73.25

GC content: 61.44

Gene sequence:

>1149_bases
ATGGCAGGGGGAGGTGCCTGTGGCGATGACCAGCGACCCACGCTGGCCGCGCTGCCGTGCGGATGGACATTGCCCGCGAC
ACAAGAAACGAAAAGATTCGGAGACACAATGAAAAGGAAGCTGCTTGTACCGGGCGCGATGCTGTTCGCATGCGCTGGTG
CCTATGCCCAGAGCGCGGTATGGCTATCGGGCTACGTCGACCTGAACATCGAGCACCTGATTCAATCGGGCCCGGCCAGC
GTCACGCGCATGACCAGCGGCGGGCTGAACAACTCGCGCTTCAACCTGAGCGGCGTCGAGGATCTCGGCGGCGGCTACAA
GGCCGTGTTCACGATCGAGCCGATGTTCTCCGCCGACACGGGCGTGCAGTCGGCGCAGTTCCGTCAGTCCTTCGTCGGAC
TCAAGAGTGCGGACCTGGGCGAGGTGACGATGGGCCGCCAGTTCACGCCTTCGTACTGGATTGCGGGTTACGCGGACCCG
AGTTGGGCCGCCGCGTACAGTATGGTGAACAACATGGAGTTCTTCTACGCGTCCTATCGCGTAGACAACGCCATCCAGTA
CAAGACGCCGACCTTCTACGGATTCACCGGCCGCGTGATGTATGCGTTCGGACTCGAAGACACGACGCGTGCGGGGCGCT
TCCTCAGTATCGGCGTTGACTACCGTAACGGCCCGCTGTTCCTGGGTGCGGTCAGCGAGCAGCAGTACACACGCGACATC
CACCAGGCGTCGCAGATCCCGTCGTCACGCGACAACTATTTCTCCGCGGTCTACCGCATCGGGGGCTTCGAGCCAACCGC
CATCTTCCATACCTACAAGGGCTATTACGCGTATCCACCCTATGTGGCGTTTAATTCGAGCGGCTGGGATGCGCAGATCG
GCGCGCGCTGGAACATCGACGGCCGCAGCCGCTTGTATGGCAGCGTGGTCTATCGTCACGACGACAACAACAAGAGCATC
ACCAGCGCGACCGGTTTCGTGATCGGCTACATCTACGGCCTGTCCAAGCGTACCGATCTCTATGCCACCTACGCACACGT
GCATAACCAGAACACGGTGCCAATCGCGTACCCGGTGACCTTCCAGTCCAACCCGAGTCCCGGACAGAACCCATCGGGGA
TGCAGCTTGGCATCCGCCACGCCTTCTGA

Upstream 100 bases:

>100_bases
TACACATACTCGTCTACGTATAATTTGTAACTCCCGAGTATACACGTTGAGGAAATACGCGGGAGAGAGGAAGACGCCGC
CAGGCGAGGTCTTCCGCACG

Downstream 100 bases:

>100_bases
ACACACCCGCTTGCTGCCGGCGCTGCGGATGTGGCGCCGGCTGGAACCACATCGCCTGATCAACAAGGAGTCAGTCATGC
ATCATCCCCAACGCCGGCAT

Product: outer membrane protein, porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MAGGGACGDDQRPTLAALPCGWTLPATQETKRFGDTMKRKLLVPGAMLFACAGAYAQSAVWLSGYVDLNIEHLIQSGPAS
VTRMTSGGLNNSRFNLSGVEDLGGGYKAVFTIEPMFSADTGVQSAQFRQSFVGLKSADLGEVTMGRQFTPSYWIAGYADP
SWAAAYSMVNNMEFFYASYRVDNAIQYKTPTFYGFTGRVMYAFGLEDTTRAGRFLSIGVDYRNGPLFLGAVSEQQYTRDI
HQASQIPSSRDNYFSAVYRIGGFEPTAIFHTYKGYYAYPPYVAFNSSGWDAQIGARWNIDGRSRLYGSVVYRHDDNNKSI
TSATGFVIGYIYGLSKRTDLYATYAHVHNQNTVPIAYPVTFQSNPSPGQNPSGMQLGIRHAF

Sequences:

>Translated_382_residues
MAGGGACGDDQRPTLAALPCGWTLPATQETKRFGDTMKRKLLVPGAMLFACAGAYAQSAVWLSGYVDLNIEHLIQSGPAS
VTRMTSGGLNNSRFNLSGVEDLGGGYKAVFTIEPMFSADTGVQSAQFRQSFVGLKSADLGEVTMGRQFTPSYWIAGYADP
SWAAAYSMVNNMEFFYASYRVDNAIQYKTPTFYGFTGRVMYAFGLEDTTRAGRFLSIGVDYRNGPLFLGAVSEQQYTRDI
HQASQIPSSRDNYFSAVYRIGGFEPTAIFHTYKGYYAYPPYVAFNSSGWDAQIGARWNIDGRSRLYGSVVYRHDDNNKSI
TSATGFVIGYIYGLSKRTDLYATYAHVHNQNTVPIAYPVTFQSNPSPGQNPSGMQLGIRHAF
>Mature_381_residues
AGGGACGDDQRPTLAALPCGWTLPATQETKRFGDTMKRKLLVPGAMLFACAGAYAQSAVWLSGYVDLNIEHLIQSGPASV
TRMTSGGLNNSRFNLSGVEDLGGGYKAVFTIEPMFSADTGVQSAQFRQSFVGLKSADLGEVTMGRQFTPSYWIAGYADPS
WAAAYSMVNNMEFFYASYRVDNAIQYKTPTFYGFTGRVMYAFGLEDTTRAGRFLSIGVDYRNGPLFLGAVSEQQYTRDIH
QASQIPSSRDNYFSAVYRIGGFEPTAIFHTYKGYYAYPPYVAFNSSGWDAQIGARWNIDGRSRLYGSVVYRHDDNNKSIT
SATGFVIGYIYGLSKRTDLYATYAHVHNQNTVPIAYPVTFQSNPSPGQNPSGMQLGIRHAF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41980; Mature: 41849

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGGACGDDQRPTLAALPCGWTLPATQETKRFGDTMKRKLLVPGAMLFACAGAYAQSAV
CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCEE
WLSGYVDLNIEHLIQSGPASVTRMTSGGLNNSRFNLSGVEDLGGGYKAVFTIEPMFSADT
EEEEEEECCHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHCCCCEEEEEEECCCCCCCC
GVQSAQFRQSFVGLKSADLGEVTMGRQFTPSYWIAGYADPSWAAAYSMVNNMEFFYASYR
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEEEEE
VDNAIQYKTPTFYGFTGRVMYAFGLEDTTRAGRFLSIGVDYRNGPLFLGAVSEQQYTRDI
ECCEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHH
HQASQIPSSRDNYFSAVYRIGGFEPTAIFHTYKGYYAYPPYVAFNSSGWDAQIGARWNID
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCEEEECCCCCCEEECEEECCC
GRSRLYGSVVYRHDDNNKSITSATGFVIGYIYGLSKRTDLYATYAHVHNQNTVPIAYPVT
CCCEEEEEEEEEECCCCCEEEHHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEE
FQSNPSPGQNPSGMQLGIRHAF
ECCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
AGGGACGDDQRPTLAALPCGWTLPATQETKRFGDTMKRKLLVPGAMLFACAGAYAQSAV
CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCEE
WLSGYVDLNIEHLIQSGPASVTRMTSGGLNNSRFNLSGVEDLGGGYKAVFTIEPMFSADT
EEEEEEECCHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHCCCCEEEEEEECCCCCCCC
GVQSAQFRQSFVGLKSADLGEVTMGRQFTPSYWIAGYADPSWAAAYSMVNNMEFFYASYR
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEEEEE
VDNAIQYKTPTFYGFTGRVMYAFGLEDTTRAGRFLSIGVDYRNGPLFLGAVSEQQYTRDI
ECCEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHH
HQASQIPSSRDNYFSAVYRIGGFEPTAIFHTYKGYYAYPPYVAFNSSGWDAQIGARWNID
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCEEEECCCCCCEEECEEECCC
GRSRLYGSVVYRHDDNNKSITSATGFVIGYIYGLSKRTDLYATYAHVHNQNTVPIAYPVT
CCCEEEEEEEEEECCCCCEEEHHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEE
FQSNPSPGQNPSGMQLGIRHAF
ECCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]