Click here to switch to the map view.

The map label for this gene is yjcS [C]

Identifier: 94314079

GI number: 94314079

Start: 1859641

End: 1860894

Strand: Direct

Name: yjcS [C]

Synonym: Rmet_5160

Alternate gene names: 94314079

Gene position: 1859641-1860894 (Clockwise)

Preceding gene: 94314078

Following gene: 94314080

Centisome position: 72.08

GC content: 67.07

Gene sequence:

>1254_bases
ATGAACGCAATCGAGGACCGCCCCGCCGCGCTAATCACCGGCAAGGGCATCGACGCCATTGGAGATGGCATCTGGCTGCT
GCATGGCCAAGGCCAGAGCTTCGTCGCCGATGTGGGCGGCGGGCTGCTGGTGGTCGACAGCGGTCCCGGCGGGCGCATTA
CGGCGGGCATGATCGAGGTCCTGCGCATACAGACGGACCTGCCCGTCCTGGCGATCTGCTACAGCCACGGTCACCTGGGC
TACAACGCCGGCGCGAAGCAGTGGCTCGACCATGCCGCGCAACGTGGCGACCCCACGCCGCGCATCCTGGCGCATGTCAA
CGTGCTGGCCCGCCAGAAGCGCTATCGGGAAACGCAGCGGATGCAGGAGCGCATGGCCGAGATCCAGTTCCGCCATGCCA
GCGGTGCCCTGGCCGGCAAGCTGGGCCAGAACCGACCTACCGAGACCTTCACCGAAGGCATCACGGTCGGGCAGGGCGAT
CGGCGCGCCGAGATTTTGTGGGCGCCATCGGAGACCGATGATGCCGTCGCCGTCTGGCTGCCCGGAAGCCGGTTGCTCTA
CGGCGGCCCCGCCGTGATCGACTCCATCCCGAATGTCGGCACACCGTTCCGCACCATGCGCGACACCGTGCGCTGGGCGG
AGACGCTCGAACGACTGGCCAGCCTGCGCCCCGAAACCGTCGTCCGTGAATTTGGCCCTTCCCTGCAAGGCGAGGACACT
TGCCAGCACGTACTGCTGCACACCGCCAAGGCACTGCGCTGGATGCGCGAAGAGGTGGTGCGACTGATGAACGCGGGCTG
CAACGAGCGTGAGATGCTGGCCGCGCTGCAACCACCACCGGATCTGTTCGAGCAGCCGTGGATGCAGCCTACCTACGGCG
ACCCGACCTATATCGCCCGCGACATCTACCGCTCCGAAAATGGCTGGTGGGATCGCAACGCCACGACGCTGCATCCGGCC
GCACCGCAAACGGTAGCCGCCGAGATCGCAGCGGCCATCGCCGATCACGGCGCGATCGTGCGGCACGCCCGCGGACTGGC
GGATCGCGGCGAGATCCAGTTGGCCCTGCATGTGATCGACCTGCTGGCACAGGCATCCGGCGATGCTCCGCATGTCGTGG
AGGCTCGCCAGCTCAAGGCCGAATGGCTGCGCGCCCGCTCGAAACAGGTGCGCAGCTATGTGTCGCGCAGCCTCTACGTC
GCGGCGGCCATGGTCCTGGAAAGCGGCTCGGACGACAACTTCGGCATCCACTAG

Upstream 100 bases:

>100_bases
CGCTCGCCGGCTCCAGCGGTGGTCCCGCCGGGACTTTCCCCACTGCATATAACGGCGAATCTGCGCGTGAATATCCCTTC
GCCAATTGGAAGGGACGCAC

Downstream 100 bases:

>100_bases
GAGCCCGCCATGCCGTTCCCACAGTCTGTTGATGCCATTGCCAACGACATCGCCGACCATCGCCGGCGCAATACATTGCG
CCTGCTCGCGATGCTGGGTC

Product: putative hydrolase

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase Domain-Containing Protein; Alkyl Sulfatase; Beta-Lactamase-Like; Hydrolase; Alkyl Sulfatase Beta-Lactamase Family Protein; Alkyl Sulfatase-Like Hydrolase; Alkyl Sulfatase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Protien; Metallo-Beta-Lactamase Domain Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNAIEDRPAALITGKGIDAIGDGIWLLHGQGQSFVADVGGGLLVVDSGPGGRITAGMIEVLRIQTDLPVLAICYSHGHLG
YNAGAKQWLDHAAQRGDPTPRILAHVNVLARQKRYRETQRMQERMAEIQFRHASGALAGKLGQNRPTETFTEGITVGQGD
RRAEILWAPSETDDAVAVWLPGSRLLYGGPAVIDSIPNVGTPFRTMRDTVRWAETLERLASLRPETVVREFGPSLQGEDT
CQHVLLHTAKALRWMREEVVRLMNAGCNEREMLAALQPPPDLFEQPWMQPTYGDPTYIARDIYRSENGWWDRNATTLHPA
APQTVAAEIAAAIADHGAIVRHARGLADRGEIQLALHVIDLLAQASGDAPHVVEARQLKAEWLRARSKQVRSYVSRSLYV
AAAMVLESGSDDNFGIH

Sequences:

>Translated_417_residues
MNAIEDRPAALITGKGIDAIGDGIWLLHGQGQSFVADVGGGLLVVDSGPGGRITAGMIEVLRIQTDLPVLAICYSHGHLG
YNAGAKQWLDHAAQRGDPTPRILAHVNVLARQKRYRETQRMQERMAEIQFRHASGALAGKLGQNRPTETFTEGITVGQGD
RRAEILWAPSETDDAVAVWLPGSRLLYGGPAVIDSIPNVGTPFRTMRDTVRWAETLERLASLRPETVVREFGPSLQGEDT
CQHVLLHTAKALRWMREEVVRLMNAGCNEREMLAALQPPPDLFEQPWMQPTYGDPTYIARDIYRSENGWWDRNATTLHPA
APQTVAAEIAAAIADHGAIVRHARGLADRGEIQLALHVIDLLAQASGDAPHVVEARQLKAEWLRARSKQVRSYVSRSLYV
AAAMVLESGSDDNFGIH
>Mature_417_residues
MNAIEDRPAALITGKGIDAIGDGIWLLHGQGQSFVADVGGGLLVVDSGPGGRITAGMIEVLRIQTDLPVLAICYSHGHLG
YNAGAKQWLDHAAQRGDPTPRILAHVNVLARQKRYRETQRMQERMAEIQFRHASGALAGKLGQNRPTETFTEGITVGQGD
RRAEILWAPSETDDAVAVWLPGSRLLYGGPAVIDSIPNVGTPFRTMRDTVRWAETLERLASLRPETVVREFGPSLQGEDT
CQHVLLHTAKALRWMREEVVRLMNAGCNEREMLAALQPPPDLFEQPWMQPTYGDPTYIARDIYRSENGWWDRNATTLHPA
APQTVAAEIAAAIADHGAIVRHARGLADRGEIQLALHVIDLLAQASGDAPHVVEARQLKAEWLRARSKQVRSYVSRSLYV
AAAMVLESGSDDNFGIH

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324409, Length=431, Percent_Identity=22.0417633410673, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45760; Mature: 45760

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIEDRPAALITGKGIDAIGDGIWLLHGQGQSFVADVGGGLLVVDSGPGGRITAGMIEV
CCCCCCCCCEEEECCCCHHCCCCEEEEECCCCCCCEECCCCEEEEECCCCCCHHHHHHHH
LRIQTDLPVLAICYSHGHLGYNAGAKQWLDHAAQRGDPTPRILAHVNVLARQKRYRETQR
HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MQERMAEIQFRHASGALAGKLGQNRPTETFTEGITVGQGDRRAEILWAPSETDDAVAVWL
HHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCEECCCCCCEEEEECCCCCCCEEEEEE
PGSRLLYGGPAVIDSIPNVGTPFRTMRDTVRWAETLERLASLRPETVVREFGPSLQGEDT
CCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHH
CQHVLLHTAKALRWMREEVVRLMNAGCNEREMLAALQPPPDLFEQPWMQPTYGDPTYIAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHH
DIYRSENGWWDRNATTLHPAAPQTVAAEIAAAIADHGAIVRHARGLADRGEIQLALHVID
HHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLAQASGDAPHVVEARQLKAEWLRARSKQVRSYVSRSLYVAAAMVLESGSDDNFGIH
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNAIEDRPAALITGKGIDAIGDGIWLLHGQGQSFVADVGGGLLVVDSGPGGRITAGMIEV
CCCCCCCCCEEEECCCCHHCCCCEEEEECCCCCCCEECCCCEEEEECCCCCCHHHHHHHH
LRIQTDLPVLAICYSHGHLGYNAGAKQWLDHAAQRGDPTPRILAHVNVLARQKRYRETQR
HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MQERMAEIQFRHASGALAGKLGQNRPTETFTEGITVGQGDRRAEILWAPSETDDAVAVWL
HHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCEECCCCCCEEEEECCCCCCCEEEEEE
PGSRLLYGGPAVIDSIPNVGTPFRTMRDTVRWAETLERLASLRPETVVREFGPSLQGEDT
CCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHH
CQHVLLHTAKALRWMREEVVRLMNAGCNEREMLAALQPPPDLFEQPWMQPTYGDPTYIAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHH
DIYRSENGWWDRNATTLHPAAPQTVAAEIAAAIADHGAIVRHARGLADRGEIQLALHVID
HHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLAQASGDAPHVVEARQLKAEWLRARSKQVRSYVSRSLYVAAAMVLESGSDDNFGIH
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA