| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94314039
Identifier: 94314039
GI number: 94314039
Start: 1814297
End: 1815358
Strand: Direct
Name: 94314039
Synonym: Rmet_5120
Alternate gene names: NA
Gene position: 1814297-1815358 (Clockwise)
Preceding gene: 94314038
Following gene: 94314040
Centisome position: 70.32
GC content: 62.9
Gene sequence:
>1062_bases ATGGATTTCATCGACGGTTCGATGTTCCCGGAAAACCAGCAGAAGCTCGTCATTACCGCCGCGCCGTATGGGCCCGAGTG GATACCTTCCGATTTTCCGGAAGACATCCCAGTGACGATGGAGCAGCAGATCCAGAAGGCGGTGGACTGCTATAACGCCG GGGCCACCGTGCTGCACGTTCACGTGCGTGAAGCGGACGGCAAAGGTTCCAAGCGGCTGTCCAAGTTCAACGAACTGCTG GCCGGCATCCGTGCCCGCGTGCCGGACATGATCCTGCAGGTGGGCGGATCGATCTCGTTCGCGCCGGAGAGCGAAGGCGA CGTGGCCAAGTGGCTGTCGGACGATACGCGCCACATGCTGGCCGAACTGAAGCCGACGCCGGACCAGGTGACGATCGCGA TCAACACCAACCAGATGAACGTGGTGGAACAGATGTGCGCGGCCGACGTGGCGGGCACCTCGCTGGCCGAACCGGCCAAC TACCGCGCCTATCGCGAAATGACGATTCCGGCCGGCCCGGAGTGGGTGGAAGAGCATATCCGCCGGCTCAGCATCAACGG CATCCAGACCCACTTCCAGCTTGCCAACATCGCGCAACTGGAAACGGTGGAGCGGATGATGCGCCGGGGCAGCTGCAATG TGCCCCTGATCCTGACCTGGGTGGCAATTGGCGGCGGCTTCGAGGCGCCTAACCTCTACAACCTCGCCAACTTCGTGCGC GCTTGCCCGAACGGCTCGGTGCTGACACTGGAAACGTCGATGCTGAACGTGCTGCCGCTGAACATGATGGCGATTGCCAT GGGCCTGCATGTGCGCTGCGGCATCGAGGACAACCTCTGGACGCAGCGGCGCGACCGCAAGATGGGCACAGTCGAGCAGA TCGAGCAGCTCGTGCGCATCTCGCGCGAGTTCGGCCGGGATGTCGCCAACGCGAAGGAAGCGCGCGAGATCTACAAGATC GGGACGTTCTACGACAGCGCCAACGAGACGTTGGCCGAGAACGGCTTCGCGCCGAACCGCAAACCCGGCCAGGTAGGCTT TACACAGCACGCACGCCGCTAA
Upstream 100 bases:
>100_bases CATCATCGGCGACAAGCCCTTCGGCATCGGCGAAGGCGAAGTCAAGGCAGAGTCGGCGCAGCCGGCCACGGCCTGAACGT TCAATTCCACGGAGAGAGAC
Downstream 100 bases:
>100_bases GGCCCTAAGACCCTAGGGCCATCCTGCTCGCCAATGCCCCGATAGCCGATCTGGCAATCGGGGCATTCGTCATCCTACGG ATTGCAAATGACGGCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MDFIDGSMFPENQQKLVITAAPYGPEWIPSDFPEDIPVTMEQQIQKAVDCYNAGATVLHVHVREADGKGSKRLSKFNELL AGIRARVPDMILQVGGSISFAPESEGDVAKWLSDDTRHMLAELKPTPDQVTIAINTNQMNVVEQMCAADVAGTSLAEPAN YRAYREMTIPAGPEWVEEHIRRLSINGIQTHFQLANIAQLETVERMMRRGSCNVPLILTWVAIGGGFEAPNLYNLANFVR ACPNGSVLTLETSMLNVLPLNMMAIAMGLHVRCGIEDNLWTQRRDRKMGTVEQIEQLVRISREFGRDVANAKEAREIYKI GTFYDSANETLAENGFAPNRKPGQVGFTQHARR
Sequences:
>Translated_353_residues MDFIDGSMFPENQQKLVITAAPYGPEWIPSDFPEDIPVTMEQQIQKAVDCYNAGATVLHVHVREADGKGSKRLSKFNELL AGIRARVPDMILQVGGSISFAPESEGDVAKWLSDDTRHMLAELKPTPDQVTIAINTNQMNVVEQMCAADVAGTSLAEPAN YRAYREMTIPAGPEWVEEHIRRLSINGIQTHFQLANIAQLETVERMMRRGSCNVPLILTWVAIGGGFEAPNLYNLANFVR ACPNGSVLTLETSMLNVLPLNMMAIAMGLHVRCGIEDNLWTQRRDRKMGTVEQIEQLVRISREFGRDVANAKEAREIYKI GTFYDSANETLAENGFAPNRKPGQVGFTQHARR >Mature_353_residues MDFIDGSMFPENQQKLVITAAPYGPEWIPSDFPEDIPVTMEQQIQKAVDCYNAGATVLHVHVREADGKGSKRLSKFNELL AGIRARVPDMILQVGGSISFAPESEGDVAKWLSDDTRHMLAELKPTPDQVTIAINTNQMNVVEQMCAADVAGTSLAEPAN YRAYREMTIPAGPEWVEEHIRRLSINGIQTHFQLANIAQLETVERMMRRGSCNVPLILTWVAIGGGFEAPNLYNLANFVR ACPNGSVLTLETSMLNVLPLNMMAIAMGLHVRCGIEDNLWTQRRDRKMGTVEQIEQLVRISREFGRDVANAKEAREIYKI GTFYDSANETLAENGFAPNRKPGQVGFTQHARR
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39300; Mature: 39300
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFIDGSMFPENQQKLVITAAPYGPEWIPSDFPEDIPVTMEQQIQKAVDCYNAGATVLHV CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE HVREADGKGSKRLSKFNELLAGIRARVPDMILQVGGSISFAPESEGDVAKWLSDDTRHML EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH AELKPTPDQVTIAINTNQMNVVEQMCAADVAGTSLAEPANYRAYREMTIPAGPEWVEEHI HHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHH RRLSINGIQTHFQLANIAQLETVERMMRRGSCNVPLILTWVAIGGGFEAPNLYNLANFVR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH ACPNGSVLTLETSMLNVLPLNMMAIAMGLHVRCGIEDNLWTQRRDRKMGTVEQIEQLVRI HCCCCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHH SREFGRDVANAKEAREIYKIGTFYDSANETLAENGFAPNRKPGQVGFTQHARR HHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MDFIDGSMFPENQQKLVITAAPYGPEWIPSDFPEDIPVTMEQQIQKAVDCYNAGATVLHV CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE HVREADGKGSKRLSKFNELLAGIRARVPDMILQVGGSISFAPESEGDVAKWLSDDTRHML EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH AELKPTPDQVTIAINTNQMNVVEQMCAADVAGTSLAEPANYRAYREMTIPAGPEWVEEHI HHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHH RRLSINGIQTHFQLANIAQLETVERMMRRGSCNVPLILTWVAIGGGFEAPNLYNLANFVR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH ACPNGSVLTLETSMLNVLPLNMMAIAMGLHVRCGIEDNLWTQRRDRKMGTVEQIEQLVRI HCCCCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHH SREFGRDVANAKEAREIYKIGTFYDSANETLAENGFAPNRKPGQVGFTQHARR HHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA