| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313998
Identifier: 94313998
GI number: 94313998
Start: 1766380
End: 1767438
Strand: Direct
Name: 94313998
Synonym: Rmet_5079
Alternate gene names: NA
Gene position: 1766380-1767438 (Clockwise)
Preceding gene: 94313997
Following gene: 94313999
Centisome position: 68.46
GC content: 60.81
Gene sequence:
>1059_bases ATGAACTTTCTTGACGGACACCTGTTCCCCGAAAACCAGCAACCGCTGATCATCACCGCTGCGCCTTATGCGCCCTCGTG GGTTCCGTCGGACTTTCCCGAGGAGATCCCTGTCACCATGGAGGAGCAAATCCAGAAAGCAGTGGATTGCTACAACGCCG GCGCCACCGTGCTGCACCTTCATGTGCGCGAACTCGACGGTAAGGGCTCCAAGCGTCTGTCCAAGTTCAATGAGCTTATC GCAGGCGTCCGCGCCCGCGTGCCGGAGATGATTATCCAGGTCGGCGGATCCATCAGTTTCGCTCCTGAAACCGAAGGCGC GGCAGCAAAGTGGCTCTCGGACGACACGCGCCACATGCTGGCCGAACTCGACCCCAAGCCCGACCAAGTGACGGTCACCG TCAATACGTCGCAGATGAACGTTCTCGAGCAGTTCGACCACCGCGACATCGTGGGCAGCTCGATGGAGGATCCCGCGGTC TTCAATGCGTACAAAGAGATGACCGTGCCGGCGCAGCCGGGCTGGGTGGAGGAGCACGTCCGCCGCCTGACCGCAGCGGG GATCCAGAGCGCCTTCCAGTGCTACAACGTCAACAGCTTCGAGTCCGTGGAGCGGCTGATGCGCCGCGGGATCTACAAAG GCCCGCTAGTCATGAACTGGGTGGCGATTGGCGGCGGCATGGACTCGCCGACCGTCTACAGCCTCGCCAACTTCATGCGC GGTGTGCCGGATGGCGCAGTCGTGACGGTGGAAAGCTCGGTACTCAACGTGCTGCCCGTCAACACCATCGGTATTGCAAT GGGGCTGCATGTTCGCTGCGGCACGGAAGATAATCTCTGGAACCAGACGCGGACGAAGAAGATTGGCACCGCAGCACAGA TCGAGCAACTGGTGCGCATCTCTCGCGAGCTGAGCCGCCCGATCGCTACCGCTAAGGAAGCGCGCGAAATGTGCAAGATC GGCGTGTTCTATGACACGGTAGAAGAATCGCTGGAGGCCAACGGGTTCGCACCCAATCGAAACGGTGGACGTCAAGGCTT CCTGCAGAAGGCTGCCTGA
Upstream 100 bases:
>100_bases GATCGACAGGAGCACCAAGCCGGTACTTCCCGTACTTCATATTTGCTGGAAGTGGTAGCGCCAAAAGCCAAGCTCCACAA TCTCTCTTCCCGGACCTGCC
Downstream 100 bases:
>100_bases TCAGGCTTCTGCTCTTCGGGCCTTAGTGCCCCTTCGAACGTCGATGTTTGCGCCGCCCTCTCAATTTGAGAGGGCGTTTT TCTTGGCTCATCGCCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MNFLDGHLFPENQQPLIITAAPYAPSWVPSDFPEEIPVTMEEQIQKAVDCYNAGATVLHLHVRELDGKGSKRLSKFNELI AGVRARVPEMIIQVGGSISFAPETEGAAAKWLSDDTRHMLAELDPKPDQVTVTVNTSQMNVLEQFDHRDIVGSSMEDPAV FNAYKEMTVPAQPGWVEEHVRRLTAAGIQSAFQCYNVNSFESVERLMRRGIYKGPLVMNWVAIGGGMDSPTVYSLANFMR GVPDGAVVTVESSVLNVLPVNTIGIAMGLHVRCGTEDNLWNQTRTKKIGTAAQIEQLVRISRELSRPIATAKEAREMCKI GVFYDTVEESLEANGFAPNRNGGRQGFLQKAA
Sequences:
>Translated_352_residues MNFLDGHLFPENQQPLIITAAPYAPSWVPSDFPEEIPVTMEEQIQKAVDCYNAGATVLHLHVRELDGKGSKRLSKFNELI AGVRARVPEMIIQVGGSISFAPETEGAAAKWLSDDTRHMLAELDPKPDQVTVTVNTSQMNVLEQFDHRDIVGSSMEDPAV FNAYKEMTVPAQPGWVEEHVRRLTAAGIQSAFQCYNVNSFESVERLMRRGIYKGPLVMNWVAIGGGMDSPTVYSLANFMR GVPDGAVVTVESSVLNVLPVNTIGIAMGLHVRCGTEDNLWNQTRTKKIGTAAQIEQLVRISRELSRPIATAKEAREMCKI GVFYDTVEESLEANGFAPNRNGGRQGFLQKAA >Mature_352_residues MNFLDGHLFPENQQPLIITAAPYAPSWVPSDFPEEIPVTMEEQIQKAVDCYNAGATVLHLHVRELDGKGSKRLSKFNELI AGVRARVPEMIIQVGGSISFAPETEGAAAKWLSDDTRHMLAELDPKPDQVTVTVNTSQMNVLEQFDHRDIVGSSMEDPAV FNAYKEMTVPAQPGWVEEHVRRLTAAGIQSAFQCYNVNSFESVERLMRRGIYKGPLVMNWVAIGGGMDSPTVYSLANFMR GVPDGAVVTVESSVLNVLPVNTIGIAMGLHVRCGTEDNLWNQTRTKKIGTAAQIEQLVRISRELSRPIATAKEAREMCKI GVFYDTVEESLEANGFAPNRNGGRQGFLQKAA
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38747; Mature: 38747
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLDGHLFPENQQPLIITAAPYAPSWVPSDFPEEIPVTMEEQIQKAVDCYNAGATVLHL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE HVRELDGKGSKRLSKFNELIAGVRARVPEMIIQVGGSISFAPETEGAAAKWLSDDTRHML EEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCHHHHHHH AELDPKPDQVTVTVNTSQMNVLEQFDHRDIVGSSMEDPAVFNAYKEMTVPAQPGWVEEHV HHCCCCCCEEEEEEECHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHH RRLTAAGIQSAFQCYNVNSFESVERLMRRGIYKGPLVMNWVAIGGGMDSPTVYSLANFMR HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH GVPDGAVVTVESSVLNVLPVNTIGIAMGLHVRCGTEDNLWNQTRTKKIGTAAQIEQLVRI CCCCCEEEEEECCHHHHCCCCHHHEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH SRELSRPIATAKEAREMCKIGVFYDTVEESLEANGFAPNRNGGRQGFLQKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MNFLDGHLFPENQQPLIITAAPYAPSWVPSDFPEEIPVTMEEQIQKAVDCYNAGATVLHL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE HVRELDGKGSKRLSKFNELIAGVRARVPEMIIQVGGSISFAPETEGAAAKWLSDDTRHML EEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCHHHHHHH AELDPKPDQVTVTVNTSQMNVLEQFDHRDIVGSSMEDPAVFNAYKEMTVPAQPGWVEEHV HHCCCCCCEEEEEEECHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHH RRLTAAGIQSAFQCYNVNSFESVERLMRRGIYKGPLVMNWVAIGGGMDSPTVYSLANFMR HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH GVPDGAVVTVESSVLNVLPVNTIGIAMGLHVRCGTEDNLWNQTRTKKIGTAAQIEQLVRI CCCCCEEEEEECCHHHHCCCCHHHEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH SRELSRPIATAKEAREMCKIGVFYDTVEESLEANGFAPNRNGGRQGFLQKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA