| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is malT [H]
Identifier: 94313943
GI number: 94313943
Start: 1702232
End: 1704799
Strand: Reverse
Name: malT [H]
Synonym: Rmet_5021
Alternate gene names: 94313943
Gene position: 1704799-1702232 (Counterclockwise)
Preceding gene: 94313951
Following gene: 94313940
Centisome position: 66.08
GC content: 70.6
Gene sequence:
>2568_bases ATGGATTGCAGTGTGCCTTCCCACAAGCTCATGCCGCCCAGGCTGGGCGGCGGCATCGCCATGCGCGACGCGCTGCTGGC GCGGCTGCATGAGGCGCGCCATGCGGCGCTGGTGGTGCTGGCTGCCAGCCCGGGGTACGGCAAGACCACGCTGTTGGCGC AGTGGCGCCAGCAACTCGTGGGGGCGCGCGCGCGCGTGGGCTGGCTCTCGCTCGGCCCGGAACTTGACGCGCCGACGCGG TTTTGCGCAGCCATCGCGGCCAGCGTGGCCAGCGTAGTACAGGGCGACGTGTCGCCATCATCCCGGCACGACCCGACCGA AGCCCTGATCGCGGCGCTGGCCGCGGTGCCCGATGAACTCTATCTGATGCTCGATGGCGCGGAGTACTTGCGCGACACCG GCGCATGGGCCGTGTTGCAGGCCTTGATCGACGCGCGCCTGCCGCGCCTGCATCTGGCGCTGGCCACGCGCTGCCGTCCG GCCTTGCGTCTTGGGCAGCTTGGGGCGGAGGGCGTGGTGGTCGAATTCGACGACGAATCGCTGGCCTTCACCCTGGCCGA AACCCGAGCGTGCCTGCCGCCCGAATCGGGTCAGGCCGCGAGCGTGCGGTTGATGGAGGCTACCCGCGGCTGGCCGGCGG GCGTGCGAATGCTGGCTGGGGGGCGCGCGCCCGACGATTCGCGCGCGGCGCTCGACGCGTACTGGTCCGAAGTGGTGGCG CCAGGGCTGAGCGTGGGACAGGCGCGGTTGTTGCGCTGGCTCGCATGGCTCGACCGCTGGACGCCGGAACTCGCCGCCGA GGTCACGGGTGTGCCTCGCGCCGCCGAATGCGCGCGGAGTCTGGTCGGGCAGGGGATCTTCATCGGCCCAGCCCGGGCGC ACGCGGGCTGGCATACGCTCCATCCGCTGTTTGCCGACTGGCTGCGGCGGTCGATGCCGCTTGCCGGTGCAGACCGGCTG GCGCTGCACCGGCGAGCCGTCGCCGCGTGGCTGCGGGTCGGTAGCAGCGGTGAGGCGCTGGACCACGCCATGCGTGCCGA CGATGGCGGGCTCGTGGCGCACGTCGTGCGCGAAGCCATGCCGGCGATGCCGGCGCTGAGTCAGCTTCGCGCGTTACCGG ACTGGATCGATCAGGCTGGCGTCAAACATGTGGTCGACGAGCCCGCCCTGTGGCTGGCCGCGGCCTGGGCTTGCACCGTT GCGGCACGTCTGGGCGAGGCGGAGCGCTGGTTGGCCATGGTCGCCGGGTGCGACGATGTTGCCCCGCAAGTCGCGCTGGT CCGCGCGAGTATCGCGTTCCAGAAAGATGACCCTGCCACCATGGATGTCTGGCTGGCCCGGCTCGGCGGCCATGCACTGC CGCATCCGTCGCTGGAGCACATTCGCGCCGCGCTGGCGGTGCGATGCGGGGCCATGCTGCATCGGCCCGAGTTTCCGCCG GTGCCAAGGCTGGAAGCGGCGCCTCATGATGAACTGGTGGCGATGGCGCATGGCGCGGCCGCGTTGACCATGCTGCTGCG CGGGGATGCGCGCAGGGCTCAGGCTATCGGGATGCCGGCGGCACGCATGGCGCAGCAGATTCATGGCAGACGTTCGGTGA GCGCTTGCGTATGCGCGGTGCCGGTAGCGGCCGCCCTGCTCGAACAGGACCGCGCCGAGGAAGCTGCCGAGATGATGGCC TGCTGGCTCGACCTGGCCCATCACTCCTCGCCGGACGTGATGATCGTGGCCACGCTGTGCCAGGCACGGCTGCAATGGCT GGCCGGCGACCAGCATGGCGCTCGCGCGACGCTGGCCGAGGCGCAGGCCCACGCGGCGGGGCGGGGGCTGATGCGGGTGC AGTTACGTCTGCTGGCGCAGCGGGTGGTGTTCGCCATTCAAGCCGGGGACTTGCGGCATGCTGGCCTGCTGCAGGACGAA CTCGACGCGCTGGCCGCCACGTTGGATGCATCGGACATGCGCGCCCGGGAGGTCGGCACGATCGCGGCGTTGTCGCGCGT GCGCGTGGCGCTGAGTGCCGGCAACCCGGTTGGGGCGCTGGCCGCGCTGGAGCCGGTCCGCTCCGACAACGCCGGCGCGC TGGTCCTGATCGATCTACTGTTCGCGCGTGTGAATGCCGCCCTGGACCGGCCACAACTCGTGGTGCGCCATCTTGAATCG GCACTGGCCGCGGGGCTGCGGCTTGGCCTGTTGCGCATGTTGCGCGATGAGCCGGGCATTCCGGCGCTGCTCGACTGTGT GCAGCCATCGGGCGACGCGGTGCGCGACAACTGGCTGGGCCGGGTGCGCGCCGCGAAGGATCAGCTCCAGCAGCCCGCCA CGTGCCTGCCGATGATTCGGCGGCGCAGGCGTGACGGCGAGCCGGAGCATCTGACCCCGCGCGAGCGCGATATCGTCGCG CTGCTCGAGCAGTCGATGTCGAACAAGCGCATCGCGCTGGTATTGAACCTGAGTGTCGATACGGTCAAGTGGAACCTGCG CCAGATCTACGCCAAGCTGGGCGTTTCCACGCGCTACGAAGTCATACTGGCCGTGCGCAACCGGGCGCTGCGCACGGGTA CCGCCTGA
Upstream 100 bases:
>100_bases AGGCTGTCGGCCGCAACGCGCGCGCACAGGCATATCCTGCTGGCCATACGGTCTGCGAGCGGTCTGAGAGTGCCGGCCGG CAGGTATGGAGCCGATGTCC
Downstream 100 bases:
>100_bases AGATGGAAGGCCGGTGACGGCCAGGTCCAGACCGGACCAGACCGGGTTGGACTAAGCAGCGACCACCGAGAACACCGCTG TCGTCTGCAGCACCATCCGG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MDCSVPSHKLMPPRLGGGIAMRDALLARLHEARHAALVVLAASPGYGKTTLLAQWRQQLVGARARVGWLSLGPELDAPTR FCAAIAASVASVVQGDVSPSSRHDPTEALIAALAAVPDELYLMLDGAEYLRDTGAWAVLQALIDARLPRLHLALATRCRP ALRLGQLGAEGVVVEFDDESLAFTLAETRACLPPESGQAASVRLMEATRGWPAGVRMLAGGRAPDDSRAALDAYWSEVVA PGLSVGQARLLRWLAWLDRWTPELAAEVTGVPRAAECARSLVGQGIFIGPARAHAGWHTLHPLFADWLRRSMPLAGADRL ALHRRAVAAWLRVGSSGEALDHAMRADDGGLVAHVVREAMPAMPALSQLRALPDWIDQAGVKHVVDEPALWLAAAWACTV AARLGEAERWLAMVAGCDDVAPQVALVRASIAFQKDDPATMDVWLARLGGHALPHPSLEHIRAALAVRCGAMLHRPEFPP VPRLEAAPHDELVAMAHGAAALTMLLRGDARRAQAIGMPAARMAQQIHGRRSVSACVCAVPVAAALLEQDRAEEAAEMMA CWLDLAHHSSPDVMIVATLCQARLQWLAGDQHGARATLAEAQAHAAGRGLMRVQLRLLAQRVVFAIQAGDLRHAGLLQDE LDALAATLDASDMRAREVGTIAALSRVRVALSAGNPVGALAALEPVRSDNAGALVLIDLLFARVNAALDRPQLVVRHLES ALAAGLRLGLLRMLRDEPGIPALLDCVQPSGDAVRDNWLGRVRAAKDQLQQPATCLPMIRRRRRDGEPEHLTPRERDIVA LLEQSMSNKRIALVLNLSVDTVKWNLRQIYAKLGVSTRYEVILAVRNRALRTGTA
Sequences:
>Translated_855_residues MDCSVPSHKLMPPRLGGGIAMRDALLARLHEARHAALVVLAASPGYGKTTLLAQWRQQLVGARARVGWLSLGPELDAPTR FCAAIAASVASVVQGDVSPSSRHDPTEALIAALAAVPDELYLMLDGAEYLRDTGAWAVLQALIDARLPRLHLALATRCRP ALRLGQLGAEGVVVEFDDESLAFTLAETRACLPPESGQAASVRLMEATRGWPAGVRMLAGGRAPDDSRAALDAYWSEVVA PGLSVGQARLLRWLAWLDRWTPELAAEVTGVPRAAECARSLVGQGIFIGPARAHAGWHTLHPLFADWLRRSMPLAGADRL ALHRRAVAAWLRVGSSGEALDHAMRADDGGLVAHVVREAMPAMPALSQLRALPDWIDQAGVKHVVDEPALWLAAAWACTV AARLGEAERWLAMVAGCDDVAPQVALVRASIAFQKDDPATMDVWLARLGGHALPHPSLEHIRAALAVRCGAMLHRPEFPP VPRLEAAPHDELVAMAHGAAALTMLLRGDARRAQAIGMPAARMAQQIHGRRSVSACVCAVPVAAALLEQDRAEEAAEMMA CWLDLAHHSSPDVMIVATLCQARLQWLAGDQHGARATLAEAQAHAAGRGLMRVQLRLLAQRVVFAIQAGDLRHAGLLQDE LDALAATLDASDMRAREVGTIAALSRVRVALSAGNPVGALAALEPVRSDNAGALVLIDLLFARVNAALDRPQLVVRHLES ALAAGLRLGLLRMLRDEPGIPALLDCVQPSGDAVRDNWLGRVRAAKDQLQQPATCLPMIRRRRRDGEPEHLTPRERDIVA LLEQSMSNKRIALVLNLSVDTVKWNLRQIYAKLGVSTRYEVILAVRNRALRTGTA >Mature_855_residues MDCSVPSHKLMPPRLGGGIAMRDALLARLHEARHAALVVLAASPGYGKTTLLAQWRQQLVGARARVGWLSLGPELDAPTR FCAAIAASVASVVQGDVSPSSRHDPTEALIAALAAVPDELYLMLDGAEYLRDTGAWAVLQALIDARLPRLHLALATRCRP ALRLGQLGAEGVVVEFDDESLAFTLAETRACLPPESGQAASVRLMEATRGWPAGVRMLAGGRAPDDSRAALDAYWSEVVA PGLSVGQARLLRWLAWLDRWTPELAAEVTGVPRAAECARSLVGQGIFIGPARAHAGWHTLHPLFADWLRRSMPLAGADRL ALHRRAVAAWLRVGSSGEALDHAMRADDGGLVAHVVREAMPAMPALSQLRALPDWIDQAGVKHVVDEPALWLAAAWACTV AARLGEAERWLAMVAGCDDVAPQVALVRASIAFQKDDPATMDVWLARLGGHALPHPSLEHIRAALAVRCGAMLHRPEFPP VPRLEAAPHDELVAMAHGAAALTMLLRGDARRAQAIGMPAARMAQQIHGRRSVSACVCAVPVAAALLEQDRAEEAAEMMA CWLDLAHHSSPDVMIVATLCQARLQWLAGDQHGARATLAEAQAHAAGRGLMRVQLRLLAQRVVFAIQAGDLRHAGLLQDE LDALAATLDASDMRAREVGTIAALSRVRVALSAGNPVGALAALEPVRSDNAGALVLIDLLFARVNAALDRPQLVVRHLES ALAAGLRLGLLRMLRDEPGIPALLDCVQPSGDAVRDNWLGRVRAAKDQLQQPATCLPMIRRRRRDGEPEHLTPRERDIVA LLEQSMSNKRIALVLNLSVDTVKWNLRQIYAKLGVSTRYEVILAVRNRALRTGTA
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=513, Percent_Identity=23.9766081871345, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 91819; Mature: 91819
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS50043 HTH_LUXR_2 ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCSVPSHKLMPPRLGGGIAMRDALLARLHEARHAALVVLAASPGYGKTTLLAQWRQQLV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH GARARVGWLSLGPELDAPTRFCAAIAASVASVVQGDVSPSSRHDPTEALIAALAAVPDEL HHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCE YLMLDGAEYLRDTGAWAVLQALIDARLPRLHLALATRCRPALRLGQLGAEGVVVEFDDES EEEECCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC LAFTLAETRACLPPESGQAASVRLMEATRGWPAGVRMLAGGRAPDDSRAALDAYWSEVVA EEEEEHHHHCCCCCCCCCCHHEEEHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHC PGLSVGQARLLRWLAWLDRWTPELAAEVTGVPRAAECARSLVGQGIFIGPARAHAGWHTL CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCEEEECHHHCCCHHHH HPLFADWLRRSMPLAGADRLALHRRAVAAWLRVGSSGEALDHAMRADDGGLVAHVVREAM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH PAMPALSQLRALPDWIDQAGVKHVVDEPALWLAAAWACTVAARLGEAERWLAMVAGCDDV CCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHH APQVALVRASIAFQKDDPATMDVWLARLGGHALPHPSLEHIRAALAVRCGAMLHRPEFPP HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VPRLEAAPHDELVAMAHGAAALTMLLRGDARRAQAIGMPAARMAQQIHGRRSVSACVCAV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH PVAAALLEQDRAEEAAEMMACWLDLAHHSSPDVMIVATLCQARLQWLAGDQHGARATLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHH AQAHAAGRGLMRVQLRLLAQRVVFAIQAGDLRHAGLLQDELDALAATLDASDMRAREVGT HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH IAALSRVRVALSAGNPVGALAALEPVRSDNAGALVLIDLLFARVNAALDRPQLVVRHLES HHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALAAGLRLGLLRMLRDEPGIPALLDCVQPSGDAVRDNWLGRVRAAKDQLQQPATCLPMIR HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RRRRDGEPEHLTPRERDIVALLEQSMSNKRIALVLNLSVDTVKWNLRQIYAKLGVSTRYE HHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHH VILAVRNRALRTGTA HHHHHHHHHHCCCCC >Mature Secondary Structure MDCSVPSHKLMPPRLGGGIAMRDALLARLHEARHAALVVLAASPGYGKTTLLAQWRQQLV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH GARARVGWLSLGPELDAPTRFCAAIAASVASVVQGDVSPSSRHDPTEALIAALAAVPDEL HHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCE YLMLDGAEYLRDTGAWAVLQALIDARLPRLHLALATRCRPALRLGQLGAEGVVVEFDDES EEEECCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC LAFTLAETRACLPPESGQAASVRLMEATRGWPAGVRMLAGGRAPDDSRAALDAYWSEVVA EEEEEHHHHCCCCCCCCCCHHEEEHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHC PGLSVGQARLLRWLAWLDRWTPELAAEVTGVPRAAECARSLVGQGIFIGPARAHAGWHTL CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCEEEECHHHCCCHHHH HPLFADWLRRSMPLAGADRLALHRRAVAAWLRVGSSGEALDHAMRADDGGLVAHVVREAM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH PAMPALSQLRALPDWIDQAGVKHVVDEPALWLAAAWACTVAARLGEAERWLAMVAGCDDV CCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHH APQVALVRASIAFQKDDPATMDVWLARLGGHALPHPSLEHIRAALAVRCGAMLHRPEFPP HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VPRLEAAPHDELVAMAHGAAALTMLLRGDARRAQAIGMPAARMAQQIHGRRSVSACVCAV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH PVAAALLEQDRAEEAAEMMACWLDLAHHSSPDVMIVATLCQARLQWLAGDQHGARATLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHH AQAHAAGRGLMRVQLRLLAQRVVFAIQAGDLRHAGLLQDELDALAATLDASDMRAREVGT HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH IAALSRVRVALSAGNPVGALAALEPVRSDNAGALVLIDLLFARVNAALDRPQLVVRHLES HHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALAAGLRLGLLRMLRDEPGIPALLDCVQPSGDAVRDNWLGRVRAAKDQLQQPATCLPMIR HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RRRRDGEPEHLTPRERDIVALLEQSMSNKRIALVLNLSVDTVKWNLRQIYAKLGVSTRYE HHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHH VILAVRNRALRTGTA HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]