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The map label for this gene is 94313935

Identifier: 94313935

GI number: 94313935

Start: 1691819

End: 1693393

Strand: Direct

Name: 94313935

Synonym: Rmet_5013

Alternate gene names: NA

Gene position: 1691819-1693393 (Clockwise)

Preceding gene: 94313934

Following gene: 94313936

Centisome position: 65.57

GC content: 65.4

Gene sequence:

>1575_bases
ATGCCGCCTTCCTGGAGCCGCCAGCACATGATTCGCGACCTGATCGAGTCCACCCCTGCCCCGGGCGATCGTGCCGACGT
ATGCATCGTCGGCGCCGGCGCGGCCGGCATCCTGCTTGCCGTGGAACTGGCCCGCCATGGCCGGCGCGTGGTGATGCTGG
AAGGCGGCGGCGAAGACATCGAGCAGGCCTCGCAGGATACCTATCGCAGCGAGATCGCCGGCCTTCGCCACCATGGCATC
CACGATGGCCGCTTTCGCGCCATCGGCGGCTCCACCACGCGATGGGGTGGCCAGATCCTGGAGTTCGATGCCATCGACTT
CGAGCAGCGCCCCTGGGTGGAAGGGAGCGGCTGGCCCATCTCCAAGCGGGAACTGGCCCCGTATTATCAGCGCGCGATCG
AACTGGAAGGACTCGCCAGCGCATCGCTTGAAGACGCGACCGTCTGGCGCGAACTGGGACTGGCGCAACCGGTGTTCTCG
AATCTCGACACGTTCCTGACCCGCTGGTGCCCGGAAACGAACTTCTCGAACCTCCACGCCAGTACCCTGCGTAATCACCC
ACTGGTGACCGTGTGGCTACATGCCAATGCCGTTTCCCCCATCGTGGAAGGCACCCATGTTCGCGGCATCCGATGCAGAA
CACTGGAAGGCAAGGAAACCACGTTCCGCGCGGACCGCTTCGTCTGGTGCATGGGTGGCATCGAAAGCTCGCGGTTCTTC
CTGCAGCCGGAGCTGGCGCAGATGCCGTGGCAACGCAACGCACTGCTGGGCAGGCATTTCCAGGACCACGTGGTCTGGCA
TACATGGCTCGACGTGACGAACCGGCGCAAGTTCCTGGATGTGTTCGGCAACGTGTTCAGCCGGGGCTACAAGTACCAGC
CCAAGATCCGGCTGTCCCGCTCGCTGCAGCAGCGCTATCGCACGCTCAACGTCGCCGCGCAGATCTCCTTTGAAAGCGAG
TCCGGCGAGATCCAGACGCAGATCAAGACAACCGCCAAGAAGCTGTTGCGCGGCCGCGTGGGTGATGTCACGGGCGGCGA
GATTGGCCGGCTCGTCCGCCATGCGCCCCTGCTGGCGCGTCAGAGCTGGAGCTACGCGGTGGCGCGGCGCGCGTATGTGC
CGCCGGACGCCCGCATCGGGCTGCAGATCCAGTGCGAGCAGTCGCCGCGCGCGGACAGCACGATCCGCCTGTCGGACTCG
CGGGACTGCCTGGGCCTCTGCCGCACAAGGCTCGACTGGCGCATCTCCAATCACGAGGTGGATACGATCCGGGCCTTCGC
GAAGGTCGCGCAGGACTCGCTGGCGGGCATCGCGCGCGTGTCTGATCCGAGTCTGTCGGAGGCGCCCGATGACAGTATCC
GGGCCACCTGCGACGACATGAACCATCACATGGGCGGGATGCGCATGTCGGCCAGCGCCAGTGACGGCATCGTCGACCTC
GACCTCAAGCTGCATGGCATGGACAACGGCTATGTATGCTCCGGCGCGGTATTCCCGACCTCGAGTTTTTCCAACCCGAC
GCACACCGTACTGGCACTGGCCGTACGGCTGGCCGAGCATATCGGGCGTCGCTGA

Upstream 100 bases:

>100_bases
ATCGCAACCTGCCGGCGCCGCATGTGCGGCGCCGCTCATATCTGGCCCTCCAGGCCATTGTCCGGCAAGGCAACTCCCCA
TAAATTCCCGGGGGAGACCT

Downstream 100 bases:

>100_bases
CATGGATCTGGCGTCTCCATCACGCCACCGCAACCCATCAACCCCCAAGGACTTGCCGATGGAAATCATCCCGTTCGCCA
ACACCGGCCGCCAGACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; NAD-Dependent Epimerase/Dehydratase; Choline Dehydrogenase-Like Flavoprotein; GMC Oxidoreductase Family; Choline Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Dehydrogenase Subunit I; GMC Family Oxidoreductase; Capsular Polysaccharide Biosynthesis Oxidoreductase; Oxidoreductase-Like Protein

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MPPSWSRQHMIRDLIESTPAPGDRADVCIVGAGAAGILLAVELARHGRRVVMLEGGGEDIEQASQDTYRSEIAGLRHHGI
HDGRFRAIGGSTTRWGGQILEFDAIDFEQRPWVEGSGWPISKRELAPYYQRAIELEGLASASLEDATVWRELGLAQPVFS
NLDTFLTRWCPETNFSNLHASTLRNHPLVTVWLHANAVSPIVEGTHVRGIRCRTLEGKETTFRADRFVWCMGGIESSRFF
LQPELAQMPWQRNALLGRHFQDHVVWHTWLDVTNRRKFLDVFGNVFSRGYKYQPKIRLSRSLQQRYRTLNVAAQISFESE
SGEIQTQIKTTAKKLLRGRVGDVTGGEIGRLVRHAPLLARQSWSYAVARRAYVPPDARIGLQIQCEQSPRADSTIRLSDS
RDCLGLCRTRLDWRISNHEVDTIRAFAKVAQDSLAGIARVSDPSLSEAPDDSIRATCDDMNHHMGGMRMSASASDGIVDL
DLKLHGMDNGYVCSGAVFPTSSFSNPTHTVLALAVRLAEHIGRR

Sequences:

>Translated_524_residues
MPPSWSRQHMIRDLIESTPAPGDRADVCIVGAGAAGILLAVELARHGRRVVMLEGGGEDIEQASQDTYRSEIAGLRHHGI
HDGRFRAIGGSTTRWGGQILEFDAIDFEQRPWVEGSGWPISKRELAPYYQRAIELEGLASASLEDATVWRELGLAQPVFS
NLDTFLTRWCPETNFSNLHASTLRNHPLVTVWLHANAVSPIVEGTHVRGIRCRTLEGKETTFRADRFVWCMGGIESSRFF
LQPELAQMPWQRNALLGRHFQDHVVWHTWLDVTNRRKFLDVFGNVFSRGYKYQPKIRLSRSLQQRYRTLNVAAQISFESE
SGEIQTQIKTTAKKLLRGRVGDVTGGEIGRLVRHAPLLARQSWSYAVARRAYVPPDARIGLQIQCEQSPRADSTIRLSDS
RDCLGLCRTRLDWRISNHEVDTIRAFAKVAQDSLAGIARVSDPSLSEAPDDSIRATCDDMNHHMGGMRMSASASDGIVDL
DLKLHGMDNGYVCSGAVFPTSSFSNPTHTVLALAVRLAEHIGRR
>Mature_523_residues
PPSWSRQHMIRDLIESTPAPGDRADVCIVGAGAAGILLAVELARHGRRVVMLEGGGEDIEQASQDTYRSEIAGLRHHGIH
DGRFRAIGGSTTRWGGQILEFDAIDFEQRPWVEGSGWPISKRELAPYYQRAIELEGLASASLEDATVWRELGLAQPVFSN
LDTFLTRWCPETNFSNLHASTLRNHPLVTVWLHANAVSPIVEGTHVRGIRCRTLEGKETTFRADRFVWCMGGIESSRFFL
QPELAQMPWQRNALLGRHFQDHVVWHTWLDVTNRRKFLDVFGNVFSRGYKYQPKIRLSRSLQQRYRTLNVAAQISFESES
GEIQTQIKTTAKKLLRGRVGDVTGGEIGRLVRHAPLLARQSWSYAVARRAYVPPDARIGLQIQCEQSPRADSTIRLSDSR
DCLGLCRTRLDWRISNHEVDTIRAFAKVAQDSLAGIARVSDPSLSEAPDDSIRATCDDMNHHMGGMRMSASASDGIVDLD
LKLHGMDNGYVCSGAVFPTSSFSNPTHTVLALAVRLAEHIGRR

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58580; Mature: 58449

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSWSRQHMIRDLIESTPAPGDRADVCIVGAGAAGILLAVELARHGRRVVMLEGGGEDI
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHH
EQASQDTYRSEIAGLRHHGIHDGRFRAIGGSTTRWGGQILEFDAIDFEQRPWVEGSGWPI
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
SKRELAPYYQRAIELEGLASASLEDATVWRELGLAQPVFSNLDTFLTRWCPETNFSNLHA
CHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCH
STLRNHPLVTVWLHANAVSPIVEGTHVRGIRCRTLEGKETTFRADRFVWCMGGIESSRFF
HHHCCCCEEEEEEECCCCCHHHCCCEECCEEEEECCCCCCEEECCEEEEEECCCCCCEEE
LQPELAQMPWQRNALLGRHFQDHVVWHTWLDVTNRRKFLDVFGNVFSRGYKYQPKIRLSR
ECCHHHHCCCCCCHHHCCCHHHHEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHH
SLQQRYRTLNVAAQISFESESGEIQTQIKTTAKKLLRGRVGDVTGGEIGRLVRHAPLLAR
HHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QSWSYAVARRAYVPPDARIGLQIQCEQSPRADSTIRLSDSRDCLGLCRTRLDWRISNHEV
CCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCEEECCCCH
DTIRAFAKVAQDSLAGIARVSDPSLSEAPDDSIRATCDDMNHHMGGMRMSASASDGIVDL
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE
DLKLHGMDNGYVCSGAVFPTSSFSNPTHTVLALAVRLAEHIGRR
EEEEEECCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPSWSRQHMIRDLIESTPAPGDRADVCIVGAGAAGILLAVELARHGRRVVMLEGGGEDI
CCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHH
EQASQDTYRSEIAGLRHHGIHDGRFRAIGGSTTRWGGQILEFDAIDFEQRPWVEGSGWPI
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
SKRELAPYYQRAIELEGLASASLEDATVWRELGLAQPVFSNLDTFLTRWCPETNFSNLHA
CHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCH
STLRNHPLVTVWLHANAVSPIVEGTHVRGIRCRTLEGKETTFRADRFVWCMGGIESSRFF
HHHCCCCEEEEEEECCCCCHHHCCCEECCEEEEECCCCCCEEECCEEEEEECCCCCCEEE
LQPELAQMPWQRNALLGRHFQDHVVWHTWLDVTNRRKFLDVFGNVFSRGYKYQPKIRLSR
ECCHHHHCCCCCCHHHCCCHHHHEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHH
SLQQRYRTLNVAAQISFESESGEIQTQIKTTAKKLLRGRVGDVTGGEIGRLVRHAPLLAR
HHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QSWSYAVARRAYVPPDARIGLQIQCEQSPRADSTIRLSDSRDCLGLCRTRLDWRISNHEV
CCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCEEECCCCH
DTIRAFAKVAQDSLAGIARVSDPSLSEAPDDSIRATCDDMNHHMGGMRMSASASDGIVDL
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE
DLKLHGMDNGYVCSGAVFPTSSFSNPTHTVLALAVRLAEHIGRR
EEEEEECCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA