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The map label for this gene is yfiS [H]

Identifier: 94313924

GI number: 94313924

Start: 1682628

End: 1683953

Strand: Reverse

Name: yfiS [H]

Synonym: Rmet_5002

Alternate gene names: 94313924

Gene position: 1683953-1682628 (Counterclockwise)

Preceding gene: 94313925

Following gene: 94313923

Centisome position: 65.27

GC content: 63.8

Gene sequence:

>1326_bases
GTGGCTCGTACATTCCGTTCGCTGCGCAACTTCAACTACCGGGTGTGGGCGAGTGGCGCGATCGTGTCCAACATCGGCAC
GTGGATGCAGCGCACGGCGCAGGACTGGCTCGTGCTCACCGAACTCACGCATCACAATGCGACTGCCGTCGGGATCGTGA
TGTCGCTGCAGTTCGGCCCCCAGATGCTGTTGTTGCCGCTTACCGGCTATGCGGCCGACCACTTCAACCGCCGCAAACTG
CTGTTCATCACGCAGACGGCCATGGGTTTGCTGGCGCTTGGGCTGGGCCTGATGACCGTCACTGGCCTGGTACGTCTGTG
GCATGTCTACGTGTTCGCATTGCTGCTCGGGTGCGTCACCGCGTTCGACGCCCCCGCGCGGCAGACCTTTGTCTCCGATC
TGGTCGGCGAGGAGGACCTGCCCAATGCCGTTGCGCTGAACTCCACCTCGTTCAATGGCGCGCGGATGATTGGCCCTGCG
ATCACGGGCCTGCTCATTGCGTCGATCGGCACGGGATGGGTATTCCTGATCAACGCGCTGTCGTTCGTCCCGGTGATCGG
CGCGCTGCGCATGTTGCGTCAGCACGAGCTGCACCTGAAGCCGCCCGCGCAGCGCTCGCGCGGCAGCTTTCTGGAAGGAT
TCAGGTACGTGTGGAAGCGCCCCGACCTGAAGGCGGCGCTGTTCATGCTGTTCCTGATCGGCACCTTCGGCCTGAACTTC
CCGATCTTCATTTCGACGATGTCGGTCAGTGCGTTTCATGCCGGCGCGGGACAGTACGGCTTGCTGAGTTCGACCATGGC
GATAGGGTCTGTTACCGGCACGCTGCTGGCCGCGCGCCGGGCACGGCCGCGCATGGCGATCCTGGTCGGTGCTGCAACCA
TCTTTGGCGTGGGCTGCATGTTTGGCGCATTGATGCCGAATGCGGTGCTGTTCGGCCTGACGCTGGCGGTGATCGGTGCA
TCGACACAGACGTTTACCACGTCCACCAACAGCCTCGTGCAGATCTCGACCGAGCCGGCGATGCGTGGCCGGGTAATCGC
TATCCTGCTGGCCATTGCACTGGGCACCACGCCGCTTGGCGCGCCAGTGGTGGGGTGGGTGGCGGACCGCTTTGGTCCGC
GCTGGGCGCTGGGCGTTGGGGCGGCTTCGGGATTTGCCGCGGCGCTCGTCGGTCTGTTCTATCTGATGAGAAATCGCAAC
CTGCGCTTCTATATCGAGACGGGTCGCCTGCGCTACAGCATCGACAAGCCGCGCCAGACGGCGTTCATGGCGGCTCCCGC
CGCGTCAGTGCCAAATGTGGTGATGAGCAAGGCGGAAGACGAGTGA

Upstream 100 bases:

>100_bases
CACCGCTGCCGAACAGCAGCAACTCGCAACCGGCGTCGAGCTTCTCAAGCGGCTGGTCGCGCCGTAACGTCAATACGATA
GATCCATAGGGAACACGTCC

Downstream 100 bases:

>100_bases
GTGGCAGCGTCGGCATCGCGCCGGCGTGCGGACAGACGCATGTCCTTGGCCTTGCCAGCCGCGCGAGGTAACGGCTCCTC
AAGGATTTCTCGGCCGACCA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MARTFRSLRNFNYRVWASGAIVSNIGTWMQRTAQDWLVLTELTHHNATAVGIVMSLQFGPQMLLLPLTGYAADHFNRRKL
LFITQTAMGLLALGLGLMTVTGLVRLWHVYVFALLLGCVTAFDAPARQTFVSDLVGEEDLPNAVALNSTSFNGARMIGPA
ITGLLIASIGTGWVFLINALSFVPVIGALRMLRQHELHLKPPAQRSRGSFLEGFRYVWKRPDLKAALFMLFLIGTFGLNF
PIFISTMSVSAFHAGAGQYGLLSSTMAIGSVTGTLLAARRARPRMAILVGAATIFGVGCMFGALMPNAVLFGLTLAVIGA
STQTFTTSTNSLVQISTEPAMRGRVIAILLAIALGTTPLGAPVVGWVADRFGPRWALGVGAASGFAAALVGLFYLMRNRN
LRFYIETGRLRYSIDKPRQTAFMAAPAASVPNVVMSKAEDE

Sequences:

>Translated_441_residues
MARTFRSLRNFNYRVWASGAIVSNIGTWMQRTAQDWLVLTELTHHNATAVGIVMSLQFGPQMLLLPLTGYAADHFNRRKL
LFITQTAMGLLALGLGLMTVTGLVRLWHVYVFALLLGCVTAFDAPARQTFVSDLVGEEDLPNAVALNSTSFNGARMIGPA
ITGLLIASIGTGWVFLINALSFVPVIGALRMLRQHELHLKPPAQRSRGSFLEGFRYVWKRPDLKAALFMLFLIGTFGLNF
PIFISTMSVSAFHAGAGQYGLLSSTMAIGSVTGTLLAARRARPRMAILVGAATIFGVGCMFGALMPNAVLFGLTLAVIGA
STQTFTTSTNSLVQISTEPAMRGRVIAILLAIALGTTPLGAPVVGWVADRFGPRWALGVGAASGFAAALVGLFYLMRNRN
LRFYIETGRLRYSIDKPRQTAFMAAPAASVPNVVMSKAEDE
>Mature_440_residues
ARTFRSLRNFNYRVWASGAIVSNIGTWMQRTAQDWLVLTELTHHNATAVGIVMSLQFGPQMLLLPLTGYAADHFNRRKLL
FITQTAMGLLALGLGLMTVTGLVRLWHVYVFALLLGCVTAFDAPARQTFVSDLVGEEDLPNAVALNSTSFNGARMIGPAI
TGLLIASIGTGWVFLINALSFVPVIGALRMLRQHELHLKPPAQRSRGSFLEGFRYVWKRPDLKAALFMLFLIGTFGLNFP
IFISTMSVSAFHAGAGQYGLLSSTMAIGSVTGTLLAARRARPRMAILVGAATIFGVGCMFGALMPNAVLFGLTLAVIGAS
TQTFTTSTNSLVQISTEPAMRGRVIAILLAIALGTTPLGAPVVGWVADRFGPRWALGVGAASGFAAALVGLFYLMRNRNL
RFYIETGRLRYSIDKPRQTAFMAAPAASVPNVVMSKAEDE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI1786806, Length=323, Percent_Identity=24.4582043343653, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47537; Mature: 47405

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTFRSLRNFNYRVWASGAIVSNIGTWMQRTAQDWLVLTELTHHNATAVGIVMSLQFGP
CCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEHHCCCCEEEEEEEEECCCC
QMLLLPLTGYAADHFNRRKLLFITQTAMGLLALGLGLMTVTGLVRLWHVYVFALLLGCVT
CEEEEEECCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDAPARQTFVSDLVGEEDLPNAVALNSTSFNGARMIGPAITGLLIASIGTGWVFLINAL
HCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
SFVPVIGALRMLRQHELHLKPPAQRSRGSFLEGFRYVWKRPDLKAALFMLFLIGTFGLNF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PIFISTMSVSAFHAGAGQYGLLSSTMAIGSVTGTLLAARRARPRMAILVGAATIFGVGCM
CEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
FGALMPNAVLFGLTLAVIGASTQTFTTSTNSLVQISTEPAMRGRVIAILLAIALGTTPLG
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
APVVGWVADRFGPRWALGVGAASGFAAALVGLFYLMRNRNLRFYIETGRLRYSIDKPRQT
CHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCHH
AFMAAPAASVPNVVMSKAEDE
EEEECCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
ARTFRSLRNFNYRVWASGAIVSNIGTWMQRTAQDWLVLTELTHHNATAVGIVMSLQFGP
CHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEHHCCCCEEEEEEEEECCCC
QMLLLPLTGYAADHFNRRKLLFITQTAMGLLALGLGLMTVTGLVRLWHVYVFALLLGCVT
CEEEEEECCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDAPARQTFVSDLVGEEDLPNAVALNSTSFNGARMIGPAITGLLIASIGTGWVFLINAL
HCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
SFVPVIGALRMLRQHELHLKPPAQRSRGSFLEGFRYVWKRPDLKAALFMLFLIGTFGLNF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PIFISTMSVSAFHAGAGQYGLLSSTMAIGSVTGTLLAARRARPRMAILVGAATIFGVGCM
CEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
FGALMPNAVLFGLTLAVIGASTQTFTTSTNSLVQISTEPAMRGRVIAILLAIALGTTPLG
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
APVVGWVADRFGPRWALGVGAASGFAAALVGLFYLMRNRNLRFYIETGRLRYSIDKPRQT
CHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCHH
AFMAAPAASVPNVVMSKAEDE
EEEECCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]