| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313922
Identifier: 94313922
GI number: 94313922
Start: 1680552
End: 1682090
Strand: Reverse
Name: 94313922
Synonym: Rmet_5000
Alternate gene names: NA
Gene position: 1682090-1680552 (Counterclockwise)
Preceding gene: 94313923
Following gene: 94313921
Centisome position: 65.2
GC content: 61.86
Gene sequence:
>1539_bases ATGGCGGATCTGGACAAGGTTGACACCACACGCAGGCTGCTTACGGTCCTCGGCGGAATCGCCCCGGTGGCACTGACTTC GCTCGCAACCGTACCGGCGTCCGCATCGGCCGCAGAGTCGAAAGGCGGTGCCCAGTCGAGCGCCGGCGCGGCGGGGACGT CCGCAGCAAAGGAGGTTCATCCTCCGGCGGGCCTTGCGATGCACGCCGGCTACGCGCAGGTGATTGCCCGTATGGCTTAT GTGTGGGGTTGGCCGATGGTCAATATGCTCAACCGCTTTGCGCGCATTACTCAGGCACCGCATCCCGGCCTGCTGAACGG TGTGTTGCCCGCTGCGCCGCGCGGCCAGGTGGGTATGCTTCACGACTACATCGATCCGGCTCAAACATTCGTGACTTGTC CGAACCAGGACGTGGTCTACGGGCTGGGCTTTTTCCAGTTGGACGAAGAGCCGGTGGTGGCCCAAGTGCCCAATTTTGGA GATCGGTTCTGGGTTTACGCACTGTACGACGCCCGGACGAACCAATTCGGCCAGGTCGGCAAGCCCTACAAGACCAAGCC CGGGTTCTACCTGCTCGCGGGGCCGAACTGGAAGGGCACCAAGCCTGCTGGCATCACTGCCGTGGTTCGCTGCCCGACGT CGCTGGCTAACGCCATTCCACGCGTCTTCATGAATGACACCGCCGAGGACCGCAAAGCTATTCAGCCAGTCCTCAACCAG ATTGTCTTTTACCCGCTGAAACAGTTCGATGGCCGTATGAAGACCATTGACTGGGCCAGGGCTCCCGAGATTCCCGGGCC AAAGTCCGAAGGTGGTGCGAGCGAAGGCGAAACCAAATGGGTTATCCCGGAGAAGTTCTTCGACCAGTTTGCGCAGGTGT TGGACACTGTGCCGCCGCTCCCCGGCGAGGAGGCGCTATACGCGCAGTTCCGTTCACTGATGGACGTTGCCAACCGTGAT GCGGAGATCAAGAAGGCGCTGGTATCGGCTGCGGTCGAGACCGAGCGTGACGCGATCGGGCCGTTTTTCGAATGGCGCCG CAACGGGCTCTCCGCAGGCAATGGCTGGAACCGCTCGACCAACAACGCCCAGACCGGACTCGACTACTTCGACCGCACCG GCACGGCCAAGTCGAACATGTTCGACAACCGCCCCCACGAAACCCAGTATTTCTACACGGACTTCGATGCGGCTGGGGCG GCGCTGAACGGCGCGAGCAACTACGAGATTGTCTTCCCCGCCGGGCAGGAGCCGCCTGTCAACGGCTTCTGGTCGCTGAC GCTATACAACGACAAGCACCTTTTCCACCCCAACAACCTCAAGCGCTATTCGCTCGGCACCAAGAACACTACGCTGAAGC GGAACGCCGATGGATCGCTGACGTTGTATGCCGGCGCGAAGTCCCCCGGCGCCGAGCGCGAATCCAATTGGCTGCCGGCT CCGAACGGCGCCTTCTCACTCTACATTCGAGCCTATTGGGGCAAGCAGCCGATTCTTGATGGCTCGTGGAAGCCACCCGT GATCCGCAAGGTGGCCTGA
Upstream 100 bases:
>100_bases GCTGTGCAGTATTGGGGACTGATCGGGATGTGAGACGCCTTCGGCTTTCGCTCGTCACGGGCACCACACCCGCCCCTTTC CTTAATTGATGAGGCTGACA
Downstream 100 bases:
>100_bases CATTTGCCTGGCTGCAACAAGTACACGTAGATCGGAGCTTGAGATGAAAGAACTGCGCTGGACGTCAATCGCATTGGCTG CGCTTGCACTGGGTCTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MADLDKVDTTRRLLTVLGGIAPVALTSLATVPASASAAESKGGAQSSAGAAGTSAAKEVHPPAGLAMHAGYAQVIARMAY VWGWPMVNMLNRFARITQAPHPGLLNGVLPAAPRGQVGMLHDYIDPAQTFVTCPNQDVVYGLGFFQLDEEPVVAQVPNFG DRFWVYALYDARTNQFGQVGKPYKTKPGFYLLAGPNWKGTKPAGITAVVRCPTSLANAIPRVFMNDTAEDRKAIQPVLNQ IVFYPLKQFDGRMKTIDWARAPEIPGPKSEGGASEGETKWVIPEKFFDQFAQVLDTVPPLPGEEALYAQFRSLMDVANRD AEIKKALVSAAVETERDAIGPFFEWRRNGLSAGNGWNRSTNNAQTGLDYFDRTGTAKSNMFDNRPHETQYFYTDFDAAGA ALNGASNYEIVFPAGQEPPVNGFWSLTLYNDKHLFHPNNLKRYSLGTKNTTLKRNADGSLTLYAGAKSPGAERESNWLPA PNGAFSLYIRAYWGKQPILDGSWKPPVIRKVA
Sequences:
>Translated_512_residues MADLDKVDTTRRLLTVLGGIAPVALTSLATVPASASAAESKGGAQSSAGAAGTSAAKEVHPPAGLAMHAGYAQVIARMAY VWGWPMVNMLNRFARITQAPHPGLLNGVLPAAPRGQVGMLHDYIDPAQTFVTCPNQDVVYGLGFFQLDEEPVVAQVPNFG DRFWVYALYDARTNQFGQVGKPYKTKPGFYLLAGPNWKGTKPAGITAVVRCPTSLANAIPRVFMNDTAEDRKAIQPVLNQ IVFYPLKQFDGRMKTIDWARAPEIPGPKSEGGASEGETKWVIPEKFFDQFAQVLDTVPPLPGEEALYAQFRSLMDVANRD AEIKKALVSAAVETERDAIGPFFEWRRNGLSAGNGWNRSTNNAQTGLDYFDRTGTAKSNMFDNRPHETQYFYTDFDAAGA ALNGASNYEIVFPAGQEPPVNGFWSLTLYNDKHLFHPNNLKRYSLGTKNTTLKRNADGSLTLYAGAKSPGAERESNWLPA PNGAFSLYIRAYWGKQPILDGSWKPPVIRKVA >Mature_511_residues ADLDKVDTTRRLLTVLGGIAPVALTSLATVPASASAAESKGGAQSSAGAAGTSAAKEVHPPAGLAMHAGYAQVIARMAYV WGWPMVNMLNRFARITQAPHPGLLNGVLPAAPRGQVGMLHDYIDPAQTFVTCPNQDVVYGLGFFQLDEEPVVAQVPNFGD RFWVYALYDARTNQFGQVGKPYKTKPGFYLLAGPNWKGTKPAGITAVVRCPTSLANAIPRVFMNDTAEDRKAIQPVLNQI VFYPLKQFDGRMKTIDWARAPEIPGPKSEGGASEGETKWVIPEKFFDQFAQVLDTVPPLPGEEALYAQFRSLMDVANRDA EIKKALVSAAVETERDAIGPFFEWRRNGLSAGNGWNRSTNNAQTGLDYFDRTGTAKSNMFDNRPHETQYFYTDFDAAGAA LNGASNYEIVFPAGQEPPVNGFWSLTLYNDKHLFHPNNLKRYSLGTKNTTLKRNADGSLTLYAGAKSPGAERESNWLPAP NGAFSLYIRAYWGKQPILDGSWKPPVIRKVA
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55883; Mature: 55751
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLDKVDTTRRLLTVLGGIAPVALTSLATVPASASAAESKGGAQSSAGAAGTSAAKEVH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHCC PPAGLAMHAGYAQVIARMAYVWGWPMVNMLNRFARITQAPHPGLLNGVLPAAPRGQVGML CCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHH HDYIDPAQTFVTCPNQDVVYGLGFFQLDEEPVVAQVPNFGDRFWVYALYDARTNQFGQVG HHHCCCHHHEEECCCCCEEEEEEEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCC KPYKTKPGFYLLAGPNWKGTKPAGITAVVRCPTSLANAIPRVFMNDTAEDRKAIQPVLNQ CCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH IVFYPLKQFDGRMKTIDWARAPEIPGPKSEGGASEGETKWVIPEKFFDQFAQVLDTVPPL HHHHHHHHCCCCEEEECHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC PGEEALYAQFRSLMDVANRDAEIKKALVSAAVETERDAIGPFFEWRRNGLSAGNGWNRST CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC NNAQTGLDYFDRTGTAKSNMFDNRPHETQYFYTDFDAAGAALNGASNYEIVFPAGQEPPV CCCHHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC NGFWSLTLYNDKHLFHPNNLKRYSLGTKNTTLKRNADGSLTLYAGAKSPGAERESNWLPA CCEEEEEEECCCEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC PNGAFSLYIRAYWGKQPILDGSWKPPVIRKVA CCCCEEEEEEEECCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure ADLDKVDTTRRLLTVLGGIAPVALTSLATVPASASAAESKGGAQSSAGAAGTSAAKEVH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHCC PPAGLAMHAGYAQVIARMAYVWGWPMVNMLNRFARITQAPHPGLLNGVLPAAPRGQVGML CCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHH HDYIDPAQTFVTCPNQDVVYGLGFFQLDEEPVVAQVPNFGDRFWVYALYDARTNQFGQVG HHHCCCHHHEEECCCCCEEEEEEEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCC KPYKTKPGFYLLAGPNWKGTKPAGITAVVRCPTSLANAIPRVFMNDTAEDRKAIQPVLNQ CCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH IVFYPLKQFDGRMKTIDWARAPEIPGPKSEGGASEGETKWVIPEKFFDQFAQVLDTVPPL HHHHHHHHCCCCEEEECHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC PGEEALYAQFRSLMDVANRDAEIKKALVSAAVETERDAIGPFFEWRRNGLSAGNGWNRST CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC NNAQTGLDYFDRTGTAKSNMFDNRPHETQYFYTDFDAAGAALNGASNYEIVFPAGQEPPV CCCHHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC NGFWSLTLYNDKHLFHPNNLKRYSLGTKNTTLKRNADGSLTLYAGAKSPGAERESNWLPA CCEEEEEEECCCEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC PNGAFSLYIRAYWGKQPILDGSWKPPVIRKVA CCCCEEEEEEEECCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA