| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313911
Identifier: 94313911
GI number: 94313911
Start: 1665846
End: 1668392
Strand: Direct
Name: 94313911
Synonym: Rmet_4989
Alternate gene names: NA
Gene position: 1665846-1668392 (Clockwise)
Preceding gene: 94313910
Following gene: 94313912
Centisome position: 64.57
GC content: 67.29
Gene sequence:
>2547_bases ATGCGTTTGCATTACACACTTCCAGCCGTGCTCCTCATGGCGCTACCCGCCCATGCCGAGCTGATCATCAGTGAGTACGT CGAGGGTACCTCGAACAACAAGGCCATCGAGATCTACAACCCCGATGCCACCGAGGCCGACCTGTCGCTCTACAAGATCG AGCAGTACAACAACGGCGTCACCGCGCCGAATGCCACGTTCCAGCTCGCCGGCAAGCTCGCGCCGGGGTCGGTCTACGTC ATGGCGCACAGCACGCTGGCCGCGGTGCTCGGCTCCAAGGTCAACCAGGCCGTAACGTTCACGTTCAATGGCGACGACGC CCTCACGCTCACGCGCTCAGGTACCGTGGTGGACCATATCGGACAGGTCGGCTTCCAGCCGCCGTCAGGTTTCTGGGGTA CAGCCACTGCCGGCACCAAGGACCACACGCTGCGCCGCAAGGCTTCGGTGACGCAGGGCGACACGGACATCACGGCGGCG TTCGATCCAGCGGTGCAGTGGGATTCGTTCAACGTCGACGACTTCTCGGACCTGGGCCTGTACAACGGCGCGGGCACCGT CACGCCGCCGCCGGTGGCGGCAGTGTGTGGCGCACCGGCAACGCACCTCGCTGACGTCCAGGGCGCGACATCGACCTCGC CGCTGGCCGGTCAGAACGTCGAGATCGAGGCCGTGGTCACCGCCGACTACAGCGGCACGGGCGGTTTCAGCGGATTCTTC GTGCAGCAGCCCGACGCACAGCGCCGCAAGCTGCCCGGTGTCTCCGAAGGTCTCTTCGTCTATGCGCCCGGCGTGACCGC GCGCGCCGGCGACCTGGTCCACCTGGTAGGCAAGGTCGAGGAGAAGTACGGTCAGACACAACTGACGCTGGCTGCGAACG GTCTGGCAAGCTGCTCCAGCGGCAACAAGGTGACGGCAGTCGATGTCACGCTGCCGCTGGCCGACGCCAAGACGCTGTCG GCCTATGAAGGGATGCTGGTGCGCCTGCCCCAGACGCTGACGGTCAGCGAGACCTACGAGCTTGGCCGCTATGGCAGCGT GCTGCTCAGCAACGGCCGCCTGCCGCTGCCGACCAACGTGGCCCCGGCCGCGAACGGCGCCGCCGCGCAAGCCGCCGCCA ACGCGCTCAACCGCCTGGTGCTGGACGACGGCTCCAACCTGCAGAACCCCGCCACGGTGCCCTACCCCGCCCCGGGCCTG TCCGCGGCCAATCCGGTGCGTGCCGGCTACACGGTCAGCGGCGTGCAGGGTGTGCTCGAGATCCGCTACAACGCCTGGCG CCTGCAGCCGGTACCGGGTGCCGCCGCCCCCACGTTCAGCGCCGCCAGCAATCCGCGCACGGGCGCGCCCACGCGCCATG CCCAGGCTGACGTGCGCGTGGCCTCGTTCAACGTGCTGAACTACTTCAACGGCGACGGCAAGGGCACCGGCTTCGACGAC CCGAACAACCGTGGCGCCAAGTCGCAAGCCGAGTTCGAGCGGCAGGAAGCCAAGATCGTTGCCGCCATCCGCGCGATTGA CGCCGATGTGGTCGGCCTGATGGAAATCGAGAACGACGGCTACGGCGACCTGAGCGCTATCCGCCGCCTGACGAGCCAGC TCGGCGCCGACTGGCGCTACGTCGATCCGGGCCTGCCCAAGCTGGGCGGCGATGCGATCACCGTGGCGATCATCTACAAC AGCCGCAACGTGGAACCGGTGGGCGTGCCCGCCACGCTGGCCATCGACGACAAGAACCGCCAGCCGCTGGCCCGCACGTT CCACCGCGTGGGCGGCACGCAGAACTTCACGGTCGTGGTGAACCACCTGAAGTCCAAGGGCTGCACCGGCGCCGCCGGCA AGGACGCCGACCAGGGCGACGGCCAGAGCTGCTGGAACCCCACCCGCCTGCGCGCGGCGGGCCTGATCGCCGACTGGCTG GCTACCTCCCCGACCGGCGTGGCCGACGTGGGCAAGCTGCTGATCGGTGACCTCAACAGCTACGCCAAGGAAGATCCGGT ACTGCTGTTCGCCGAAAAGGGTTACGCCGACATGGTGGCGAAGTTCGTAGGCAAGGATGCGTACAGCTACGTGTTCGGCG GTGAATCGGGCTACATCGACCACGCACTGGCCACTTCCGCACTGGCAGATCGCGTGCGTGCCGTGCATGAATGGCACATC AACGCAGACGAGCCGATCGCGCTTGAATACTCGTTCGCGTACAAGAGCGCCGAGCAGCAACAGACGTTCTATGCAGCTGA CCCCTACCGTTCGTCGGACCATGATCCGGTGCTGGTCGATCTGGCCTTGAACTCGCAGTCGACAGGTGGCGGCAGCGATG GCGCCGGTGGCACAGGTGGCACAGGTGGCACAGGTGGCACAGGTGGCACAGGTGGCACAGATGGCACCAGCGGTACGGGT GGCTCCGGTGGTTCCGGTGGCTCCAGCGGATCGGCCGATTCCGGCAACTCCGGCGCCGGCTCGATGGACCCGTTCACGTG GCTGACGCTGGCTGCTGGCGTGGCCGCGCTGGCACGCCGCCGCTCGTGGCGCTCGTGGGCAGTCTGA
Upstream 100 bases:
>100_bases GCCAGTCATTGGCGCGTCATCGACGCCGCATAGCATCTCGCGCTTCGCAGTCCCCACAACACCCCGTGCCCAAGTCGCGC GATTCCATCCGAGCCAATCC
Downstream 100 bases:
>100_bases ACGCCCTGGCGCGCCGCTGGCCTGACTGGCGGTGGCAAAGCCCGGTCCATCCGGGCTTCCTCGCCGTCGCCCTGCTGATG CTCGCGCTACAAGCGGGTGG
Product: putative endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease I; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase Family; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; PKD Domain-Containing Protein; Exported Nuclease; Endonuclease/Exonuclease/PhosphataseEndonuclease I; Outer Membrane Adhesin Like Proteiin; Extracellular Ribonuclease; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; DNA/RNA Non-Specific Endonuclease; Extracellular Nuclease/Phosphatase; 50S Ribosomal Type B; 5-Nucleotidase Family Protein
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MRLHYTLPAVLLMALPAHAELIISEYVEGTSNNKAIEIYNPDATEADLSLYKIEQYNNGVTAPNATFQLAGKLAPGSVYV MAHSTLAAVLGSKVNQAVTFTFNGDDALTLTRSGTVVDHIGQVGFQPPSGFWGTATAGTKDHTLRRKASVTQGDTDITAA FDPAVQWDSFNVDDFSDLGLYNGAGTVTPPPVAAVCGAPATHLADVQGATSTSPLAGQNVEIEAVVTADYSGTGGFSGFF VQQPDAQRRKLPGVSEGLFVYAPGVTARAGDLVHLVGKVEEKYGQTQLTLAANGLASCSSGNKVTAVDVTLPLADAKTLS AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPAANGAAAQAAANALNRLVLDDGSNLQNPATVPYPAPGL SAANPVRAGYTVSGVQGVLEIRYNAWRLQPVPGAAAPTFSAASNPRTGAPTRHAQADVRVASFNVLNYFNGDGKGTGFDD PNNRGAKSQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGLPKLGGDAITVAIIYN SRNVEPVGVPATLAIDDKNRQPLARTFHRVGGTQNFTVVVNHLKSKGCTGAAGKDADQGDGQSCWNPTRLRAAGLIADWL ATSPTGVADVGKLLIGDLNSYAKEDPVLLFAEKGYADMVAKFVGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHI NADEPIALEYSFAYKSAEQQQTFYAADPYRSSDHDPVLVDLALNSQSTGGGSDGAGGTGGTGGTGGTGGTGGTDGTSGTG GSGGSGGSSGSADSGNSGAGSMDPFTWLTLAAGVAALARRRSWRSWAV
Sequences:
>Translated_848_residues MRLHYTLPAVLLMALPAHAELIISEYVEGTSNNKAIEIYNPDATEADLSLYKIEQYNNGVTAPNATFQLAGKLAPGSVYV MAHSTLAAVLGSKVNQAVTFTFNGDDALTLTRSGTVVDHIGQVGFQPPSGFWGTATAGTKDHTLRRKASVTQGDTDITAA FDPAVQWDSFNVDDFSDLGLYNGAGTVTPPPVAAVCGAPATHLADVQGATSTSPLAGQNVEIEAVVTADYSGTGGFSGFF VQQPDAQRRKLPGVSEGLFVYAPGVTARAGDLVHLVGKVEEKYGQTQLTLAANGLASCSSGNKVTAVDVTLPLADAKTLS AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPAANGAAAQAAANALNRLVLDDGSNLQNPATVPYPAPGL SAANPVRAGYTVSGVQGVLEIRYNAWRLQPVPGAAAPTFSAASNPRTGAPTRHAQADVRVASFNVLNYFNGDGKGTGFDD PNNRGAKSQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGLPKLGGDAITVAIIYN SRNVEPVGVPATLAIDDKNRQPLARTFHRVGGTQNFTVVVNHLKSKGCTGAAGKDADQGDGQSCWNPTRLRAAGLIADWL ATSPTGVADVGKLLIGDLNSYAKEDPVLLFAEKGYADMVAKFVGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHI NADEPIALEYSFAYKSAEQQQTFYAADPYRSSDHDPVLVDLALNSQSTGGGSDGAGGTGGTGGTGGTGGTGGTDGTSGTG GSGGSGGSSGSADSGNSGAGSMDPFTWLTLAAGVAALARRRSWRSWAV >Mature_848_residues MRLHYTLPAVLLMALPAHAELIISEYVEGTSNNKAIEIYNPDATEADLSLYKIEQYNNGVTAPNATFQLAGKLAPGSVYV MAHSTLAAVLGSKVNQAVTFTFNGDDALTLTRSGTVVDHIGQVGFQPPSGFWGTATAGTKDHTLRRKASVTQGDTDITAA FDPAVQWDSFNVDDFSDLGLYNGAGTVTPPPVAAVCGAPATHLADVQGATSTSPLAGQNVEIEAVVTADYSGTGGFSGFF VQQPDAQRRKLPGVSEGLFVYAPGVTARAGDLVHLVGKVEEKYGQTQLTLAANGLASCSSGNKVTAVDVTLPLADAKTLS AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPAANGAAAQAAANALNRLVLDDGSNLQNPATVPYPAPGL SAANPVRAGYTVSGVQGVLEIRYNAWRLQPVPGAAAPTFSAASNPRTGAPTRHAQADVRVASFNVLNYFNGDGKGTGFDD PNNRGAKSQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGLPKLGGDAITVAIIYN SRNVEPVGVPATLAIDDKNRQPLARTFHRVGGTQNFTVVVNHLKSKGCTGAAGKDADQGDGQSCWNPTRLRAAGLIADWL ATSPTGVADVGKLLIGDLNSYAKEDPVLLFAEKGYADMVAKFVGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHI NADEPIALEYSFAYKSAEQQQTFYAADPYRSSDHDPVLVDLALNSQSTGGGSDGAGGTGGTGGTGGTGGTGGTDGTSGTG GSGGSGGSSGSADSGNSGAGSMDPFTWLTLAAGVAALARRRSWRSWAV
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87901; Mature: 87901
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHYTLPAVLLMALPAHAELIISEYVEGTSNNKAIEIYNPDATEADLSLYKIEQYNNGV CEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC TAPNATFQLAGKLAPGSVYVMAHSTLAAVLGSKVNQAVTFTFNGDDALTLTRSGTVVDHI CCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHH GQVGFQPPSGFWGTATAGTKDHTLRRKASVTQGDTDITAAFDPAVQWDSFNVDDFSDLGL HHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCCHHCCC YNGAGTVTPPPVAAVCGAPATHLADVQGATSTSPLAGQNVEIEAVVTADYSGTGGFSGFF CCCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEE VQQPDAQRRKLPGVSEGLFVYAPGVTARAGDLVHLVGKVEEKYGQTQLTLAANGLASCSS EECCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC GNKVTAVDVTLPLADAKTLSAYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNV CCEEEEEEEEEECCCCHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCC APAANGAAAQAAANALNRLVLDDGSNLQNPATVPYPAPGLSAANPVRAGYTVSGVQGVLE CCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHEEEE IRYNAWRLQPVPGAAAPTFSAASNPRTGAPTRHAQADVRVASFNVLNYFNGDGKGTGFDD EEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC PNNRGAKSQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGDLSAIRRLTSQLGADWRY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEE VDPGLPKLGGDAITVAIIYNSRNVEPVGVPATLAIDDKNRQPLARTFHRVGGTQNFTVVV ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEE NHLKSKGCTGAAGKDADQGDGQSCWNPTRLRAAGLIADWLATSPTGVADVGKLLIGDLNS EEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YAKEDPVLLFAEKGYADMVAKFVGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHI HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEC NADEPIALEYSFAYKSAEQQQTFYAADPYRSSDHDPVLVDLALNSQSTGGGSDGAGGTGG CCCCCEEEEEEHHHCCCHHCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC TGGTGGTGGTGGTDGTSGTGGSGGSGGSSGSADSGNSGAGSMDPFTWLTLAAGVAALARR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RSWRSWAV CCCCCCCC >Mature Secondary Structure MRLHYTLPAVLLMALPAHAELIISEYVEGTSNNKAIEIYNPDATEADLSLYKIEQYNNGV CEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC TAPNATFQLAGKLAPGSVYVMAHSTLAAVLGSKVNQAVTFTFNGDDALTLTRSGTVVDHI CCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCHHHHH GQVGFQPPSGFWGTATAGTKDHTLRRKASVTQGDTDITAAFDPAVQWDSFNVDDFSDLGL HHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCCHHCCC YNGAGTVTPPPVAAVCGAPATHLADVQGATSTSPLAGQNVEIEAVVTADYSGTGGFSGFF CCCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEE VQQPDAQRRKLPGVSEGLFVYAPGVTARAGDLVHLVGKVEEKYGQTQLTLAANGLASCSS EECCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC GNKVTAVDVTLPLADAKTLSAYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNV CCEEEEEEEEEECCCCHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCC APAANGAAAQAAANALNRLVLDDGSNLQNPATVPYPAPGLSAANPVRAGYTVSGVQGVLE CCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHEEEE IRYNAWRLQPVPGAAAPTFSAASNPRTGAPTRHAQADVRVASFNVLNYFNGDGKGTGFDD EEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC PNNRGAKSQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGDLSAIRRLTSQLGADWRY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEE VDPGLPKLGGDAITVAIIYNSRNVEPVGVPATLAIDDKNRQPLARTFHRVGGTQNFTVVV ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEE NHLKSKGCTGAAGKDADQGDGQSCWNPTRLRAAGLIADWLATSPTGVADVGKLLIGDLNS EEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YAKEDPVLLFAEKGYADMVAKFVGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHI HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEC NADEPIALEYSFAYKSAEQQQTFYAADPYRSSDHDPVLVDLALNSQSTGGGSDGAGGTGG CCCCCEEEEEEHHHCCCHHCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC TGGTGGTGGTGGTDGTSGTGGSGGSGGSSGSADSGNSGAGSMDPFTWLTLAAGVAALARR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RSWRSWAV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA