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The map label for this gene is yhbV [H]

Identifier: 94313861

GI number: 94313861

Start: 1603969

End: 1604889

Strand: Reverse

Name: yhbV [H]

Synonym: Rmet_4939

Alternate gene names: 94313861

Gene position: 1604889-1603969 (Counterclockwise)

Preceding gene: 94313862

Following gene: 94313860

Centisome position: 62.2

GC content: 65.15

Gene sequence:

>921_bases
ATGGCAATGCCCACACAGCAATCTCCCTTGTTTCGAATTTCCCTCGGCCCCTTGCTTTACTACTGGCCACGCGCGACGGT
GCTGCAGTTCTACGCGTCGGTCGCGGACAGCCCCGTCGACCGTGTTCATCTCGGCGAAGCCGTCTGCACGCGGCGGCACG
AATTGCGCCATGCGGACTGGCTCGAAATCGCGCAGATGTTGCGCGAGGCAGGCAAGCAGGTGGTGTTGTCGACGCCGGTG
CTGGTCGAATCCGACAGCGATATCGCAGTCATGCGCCGGGTTTGCGGGCAGGACGACTACCTGGTCGAAGCCAACGACCT
TGGCGCGGTGCGCTGCATGGGCGGGCGTCCGTTCGTGGGCGGCCCACACCTGAACGTCTATCAGGGCGACACGCTGGCAT
GGCTGGCATCGCTTGGCGCGGTAGGTTGCACGGTGCCGGTCGAAATGGATGGCCGCACGATGGCCGCGCTGGCCGCGGCG
CGACCGGCGGGTCTTGATCTGGAAGCGCTGGTCTGGGGGCGTATGCCGCTGGCGTTCTCCGCGCGCTGCTTTACCGCACG
CCATCACCGTCTGCGTAAGGACGCTTGCGAATTCCGCTGCCTGGACTATCCAGACGGGCTGGTGGCCGACACGGGCGAGG
GGCAGGCGTTCTTCACGCTCAACGGCATCCAGACGCAGTCGGCCACTTGCCTCGATCTCTGCGCCGAAGTGTCGCGGATG
GCAGAGGCCGGTGTTGGTCTGATGCGTGTCAGCGCCCATTCCACAGGCACTTTCGAAGCGATTGCCCATCTCGATGGCAT
TCGCCACGGAATGCCGGCGGCGCCGAGTCCGGTCATGCCTGCGGACGCGGCACCCAGTAACGGGTACTGGACGGGCAAGC
CGGGCATTCGATGGATTGAGAGCGAGGAGGCTACGGCATGA

Upstream 100 bases:

>100_bases
CACGCTGGGACGCCACGCCGAAGGCGACCAGGTCACGCAAGGCGCGTACGAGCGGCCCTGGCGCTGAGCGGCGTCCAACC
ATCACAAGCCAGGATTCCAC

Downstream 100 bases:

>100_bases
CGATGCTGACCGGATTGATGTCGCGGGTGCACCGGCACATGCCGGCGCCCGCGCGCGCGTTGCCCTTCGTGTTGGCCGTG
GAGGCCATGCGCCGCTCGGG

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAMPTQQSPLFRISLGPLLYYWPRATVLQFYASVADSPVDRVHLGEAVCTRRHELRHADWLEIAQMLREAGKQVVLSTPV
LVESDSDIAVMRRVCGQDDYLVEANDLGAVRCMGGRPFVGGPHLNVYQGDTLAWLASLGAVGCTVPVEMDGRTMAALAAA
RPAGLDLEALVWGRMPLAFSARCFTARHHRLRKDACEFRCLDYPDGLVADTGEGQAFFTLNGIQTQSATCLDLCAEVSRM
AEAGVGLMRVSAHSTGTFEAIAHLDGIRHGMPAAPSPVMPADAAPSNGYWTGKPGIRWIESEEATA

Sequences:

>Translated_306_residues
MAMPTQQSPLFRISLGPLLYYWPRATVLQFYASVADSPVDRVHLGEAVCTRRHELRHADWLEIAQMLREAGKQVVLSTPV
LVESDSDIAVMRRVCGQDDYLVEANDLGAVRCMGGRPFVGGPHLNVYQGDTLAWLASLGAVGCTVPVEMDGRTMAALAAA
RPAGLDLEALVWGRMPLAFSARCFTARHHRLRKDACEFRCLDYPDGLVADTGEGQAFFTLNGIQTQSATCLDLCAEVSRM
AEAGVGLMRVSAHSTGTFEAIAHLDGIRHGMPAAPSPVMPADAAPSNGYWTGKPGIRWIESEEATA
>Mature_305_residues
AMPTQQSPLFRISLGPLLYYWPRATVLQFYASVADSPVDRVHLGEAVCTRRHELRHADWLEIAQMLREAGKQVVLSTPVL
VESDSDIAVMRRVCGQDDYLVEANDLGAVRCMGGRPFVGGPHLNVYQGDTLAWLASLGAVGCTVPVEMDGRTMAALAAAR
PAGLDLEALVWGRMPLAFSARCFTARHHRLRKDACEFRCLDYPDGLVADTGEGQAFFTLNGIQTQSATCLDLCAEVSRMA
EAGVGLMRVSAHSTGTFEAIAHLDGIRHGMPAAPSPVMPADAAPSNGYWTGKPGIRWIESEEATA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=295, Percent_Identity=38.9830508474576, Blast_Score=195, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33084; Mature: 32953

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPTQQSPLFRISLGPLLYYWPRATVLQFYASVADSPVDRVHLGEAVCTRRHELRHADW
CCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
LEIAQMLREAGKQVVLSTPVLVESDSDIAVMRRVCGQDDYLVEANDLGAVRCMGGRPFVG
HHHHHHHHHCCCEEEEECCEEEECCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCC
GPHLNVYQGDTLAWLASLGAVGCTVPVEMDGRTMAALAAARPAGLDLEALVWGRMPLAFS
CCCCEEECCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHEECCCCHHHH
ARCFTARHHRLRKDACEFRCLDYPDGLVADTGEGQAFFTLNGIQTQSATCLDLCAEVSRM
HHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
AEAGVGLMRVSAHSTGTFEAIAHLDGIRHGMPAAPSPVMPADAAPSNGYWTGKPGIRWIE
HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEC
SEEATA
CCCCCC
>Mature Secondary Structure 
AMPTQQSPLFRISLGPLLYYWPRATVLQFYASVADSPVDRVHLGEAVCTRRHELRHADW
CCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
LEIAQMLREAGKQVVLSTPVLVESDSDIAVMRRVCGQDDYLVEANDLGAVRCMGGRPFVG
HHHHHHHHHCCCEEEEECCEEEECCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCC
GPHLNVYQGDTLAWLASLGAVGCTVPVEMDGRTMAALAAARPAGLDLEALVWGRMPLAFS
CCCCEEECCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHEECCCCHHHH
ARCFTARHHRLRKDACEFRCLDYPDGLVADTGEGQAFFTLNGIQTQSATCLDLCAEVSRM
HHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
AEAGVGLMRVSAHSTGTFEAIAHLDGIRHGMPAAPSPVMPADAAPSNGYWTGKPGIRWIE
HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEC
SEEATA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]