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The map label for this gene is ycgM [C]

Identifier: 94313829

GI number: 94313829

Start: 1569705

End: 1570400

Strand: Direct

Name: ycgM [C]

Synonym: Rmet_4907

Alternate gene names: 94313829

Gene position: 1569705-1570400 (Clockwise)

Preceding gene: 94313828

Following gene: 94313830

Centisome position: 60.84

GC content: 65.09

Gene sequence:

>696_bases
ATGACCGAATTCGTCATCCAGCCTGCCCCGCAGGCCAGCGTAGCCGTAGCGGGCAGCCAGGCCCGTTTCCCTATCCGCCG
CGTGTTCTGCGTGGGGCGCAACTACGCCGCCCACGCACGCGAAATGGGCAAGGACCCCGATCGCGAACCGCCGTTCTTCT
TCACCAAGCCAGCCGATGCCGTCGTGGCCGCTGAAGGCACGGTGCCGCATCCGCCGTTGACGGAGAACCTCCACCACGAG
ATCGAGCTTGTTGTCGCGATCGGCAAGGGCGGCACGAACGTCAGCCCGGCGCAGGCACTCGACCTGGTGTGGGGCTACGC
CGTGGGCGTGGACATGACGCGCCGTGACCTGCAGGACGTCGCCAAGAAGATGAGCCGCCCGTGGGACTGGTCGAAGGCCT
TCGATGCGTCAGGCCCGTGCGGTCCGCTGCATGCGGCATCCAGCATCGGCCATCCGTCCAAGGGCGCGATCTGGCTCAAG
GTCAATGGCGAAACGCGCCAGGAAGGCGACCTGACCGAACTGATCTGGCCTGTTGCCGATGTGATTGCCTATATCTCGGA
AGCCGTTGCACTGGAACCGGGTGACCTGATCTTCACCGGCACGCCGGCAGGTGTCGGCGCCCTGAACCCCGGCGACGTCG
TCAGCGGCGGTGTCGAAGGTATTGGTGAAATCACTTTCACCATCGGCAAGCGCTAA

Upstream 100 bases:

>100_bases
GGGCAACGCGCTGGAGTTCAAGGCGTTCGGCGACATGAGCCAGGTATTCGCGAAGTAACACCCCACACGATTCACCCATC
CCAAGACAATCCAGCGAGAC

Downstream 100 bases:

>100_bases
GACATCACATTCGCGTAGTGCCAGACGGCGTTGCTCATTTCTCGTGAGCAACGCCGTTTTTCCTTTTTATTCATGCAATT
ACGAACACTCTAGAGCGGTT

Product: putative isomerase/hydrolase; putative Fumarylacetoacetate (FAA) hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTEFVIQPAPQASVAVAGSQARFPIRRVFCVGRNYAAHAREMGKDPDREPPFFFTKPADAVVAAEGTVPHPPLTENLHHE
IELVVAIGKGGTNVSPAQALDLVWGYAVGVDMTRRDLQDVAKKMSRPWDWSKAFDASGPCGPLHAASSIGHPSKGAIWLK
VNGETRQEGDLTELIWPVADVIAYISEAVALEPGDLIFTGTPAGVGALNPGDVVSGGVEGIGEITFTIGKR

Sequences:

>Translated_231_residues
MTEFVIQPAPQASVAVAGSQARFPIRRVFCVGRNYAAHAREMGKDPDREPPFFFTKPADAVVAAEGTVPHPPLTENLHHE
IELVVAIGKGGTNVSPAQALDLVWGYAVGVDMTRRDLQDVAKKMSRPWDWSKAFDASGPCGPLHAASSIGHPSKGAIWLK
VNGETRQEGDLTELIWPVADVIAYISEAVALEPGDLIFTGTPAGVGALNPGDVVSGGVEGIGEITFTIGKR
>Mature_230_residues
TEFVIQPAPQASVAVAGSQARFPIRRVFCVGRNYAAHAREMGKDPDREPPFFFTKPADAVVAAEGTVPHPPLTENLHHEI
ELVVAIGKGGTNVSPAQALDLVWGYAVGVDMTRRDLQDVAKKMSRPWDWSKAFDASGPCGPLHAASSIGHPSKGAIWLKV
NGETRQEGDLTELIWPVADVIAYISEAVALEPGDLIFTGTPAGVGALNPGDVVSGGVEGIGEITFTIGKR

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=205, Percent_Identity=43.4146341463415, Blast_Score=175, Evalue=3e-44,
Organism=Homo sapiens, GI215422413, Length=200, Percent_Identity=43, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI66348062, Length=198, Percent_Identity=43.4343434343434, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI156231349, Length=247, Percent_Identity=33.1983805668016, Blast_Score=125, Evalue=3e-29,
Organism=Homo sapiens, GI40786394, Length=247, Percent_Identity=32.3886639676113, Blast_Score=121, Evalue=5e-28,
Organism=Escherichia coli, GI1787428, Length=204, Percent_Identity=38.2352941176471, Blast_Score=142, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=38.0208333333333, Blast_Score=150, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6324161, Length=221, Percent_Identity=35.2941176470588, Blast_Score=140, Evalue=2e-34,
Organism=Drosophila melanogaster, GI28571789, Length=205, Percent_Identity=33.1707317073171, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28572127, Length=211, Percent_Identity=35.5450236966825, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24663695, Length=215, Percent_Identity=29.3023255813954, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24487; Mature: 24356

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFVIQPAPQASVAVAGSQARFPIRRVFCVGRNYAAHAREMGKDPDREPPFFFTKPADA
CCCEEECCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCCE
VVAAEGTVPHPPLTENLHHEIELVVAIGKGGTNVSPAQALDLVWGYAVGVDMTRRDLQDV
EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AKKMSRPWDWSKAFDASGPCGPLHAASSIGHPSKGAIWLKVNGETRQEGDLTELIWPVAD
HHHHCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
VIAYISEAVALEPGDLIFTGTPAGVGALNPGDVVSGGVEGIGEITFTIGKR
HHHHHHHHHEECCCCEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TEFVIQPAPQASVAVAGSQARFPIRRVFCVGRNYAAHAREMGKDPDREPPFFFTKPADA
CCEEECCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCCE
VVAAEGTVPHPPLTENLHHEIELVVAIGKGGTNVSPAQALDLVWGYAVGVDMTRRDLQDV
EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AKKMSRPWDWSKAFDASGPCGPLHAASSIGHPSKGAIWLKVNGETRQEGDLTELIWPVAD
HHHHCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
VIAYISEAVALEPGDLIFTGTPAGVGALNPGDVVSGGVEGIGEITFTIGKR
HHHHHHHHHEECCCCEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]