| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is sorA
Identifier: 94313813
GI number: 94313813
Start: 1554681
End: 1555913
Strand: Direct
Name: sorA
Synonym: Rmet_4891
Alternate gene names: NA
Gene position: 1554681-1555913 (Clockwise)
Preceding gene: 291481545
Following gene: 94313814
Centisome position: 60.26
GC content: 64.88
Gene sequence:
>1233_bases ATGGAGAATCGAGTCCGGCGACGCCGGTTTCTCAAGCAGGCTGGCGCGTTGACGGCCAATGCGGTCGTCGGCACCACCGC CCTGAACGCCCTCGCCGCCAGCGGCGACAAGCAGGTCCAGCTCCCCTTCGACAACGGCGCGCGCGAGCTTGTGGCGTTTC CGCAGAAGCGGCCGCTGATCCTGCTGACCAGCCGGCCGCCGCAGTTGGAAACCCCCTTTAGCGTGTTCAACGAGGGGATT CTGACGCCTAACGACGCGTTTTTCGTGCGTTATCACTGGAGCGGCATTCCGACCTCGGTCGACCCACAGACCTATCGGCT CCGCATTGGCGGCAAGGTGAAAACGCCGCTCGAGCTATCACTGGCCGACATCAAGGCCATCGCGCAGCCGATGGAAGTCG TCGCCGTCAACCAGTGCTCGGGCAACAGCCGTGGCTTTCTTGCTCCGCGCGTCAATGGCGGCCAGCTCGCCAACGGCGCC ATGGGCAACGCGCGCTGGACCGGCGTGCCGCTGAAGGCCGTGCTCGAACGAGCCGGCGTGCAACCCGGCGCTGTCCAGGT CAGCTTCAATGGCCTCGACCGGCCACCACTCGACAACAGCCCCGACTTCGTCAAATCGCTCGATATCGACCACGCGCTCG ATGGCGAGGTCATGCTGGCGTGGTCCATGAATGGCGAAGACTTGCCGATGCTCAATGGCTACCCGCTGCGGCTGGTGGTG CCGGGCCACTACGGTACGTACTGGGTGAAACACCTGTCCGATATCACCGTTCTCGACAAACCGTTCGACGGTTTCTGGGT ACAGAGCGCCTATCGCATTCCCGACAACGCCGGGGCCAATGTCGAACCCGGCTCGGCACCGGCACGCACACGCCCGATCG GGCGCTTCAACGTGCGCTCGTTCATCACCAGCCTGACCGAAGGCGCGACGGTCCCGTCCGGACGAGAGACCGTGGTAAGA GGCATTGCGTTCGACGGCGGCTACGGTATCGCCGAAGTCGCATTCTCGGCAGACGGCGGCCGAAGCTGGACGGAAGCCAC GCTCGGCCAGGATCTCGGCAAGTACTCGTTCCGCGAATGGCGCGCCGCATTCCGCCCGCCACGCAAGGGTGCCTATGACC TCCGGGTGCGCGCGGTCAATCGTATCGGCCAGAGCCAGCCGATGACGGCGTTGTGGAATCCGGCCGGCTACATGCGCAAC GTGGTGGAAACCACGCGCGTCAAGGCAGTCTGA
Upstream 100 bases:
>100_bases TTACATGGCTTGCAGCACTGAATAGGCTTTATCCCCGTCCTCACCCCCGTGTGTGCGCCCCCGCGGCCACGGCCCAAGAT AAGAACGACGGAGACAAGCC
Downstream 100 bases:
>100_bases GGAGCCCACCATGCAAAAGACCCCTTGCAGCCGCTTCCCGGCGCGACGCCTTGCCATCAGCCTGGCGCTGATGCTCTCCG CCCTGCCCGCCGCGCACGCG
Product: Sulfite:cytochrome c oxidoreductase subunit A
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Membrane-Bound Oxidoreductase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Nitrate Reductase / Sulfite Dehydrogenase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MENRVRRRRFLKQAGALTANAVVGTTALNALAASGDKQVQLPFDNGARELVAFPQKRPLILLTSRPPQLETPFSVFNEGI LTPNDAFFVRYHWSGIPTSVDPQTYRLRIGGKVKTPLELSLADIKAIAQPMEVVAVNQCSGNSRGFLAPRVNGGQLANGA MGNARWTGVPLKAVLERAGVQPGAVQVSFNGLDRPPLDNSPDFVKSLDIDHALDGEVMLAWSMNGEDLPMLNGYPLRLVV PGHYGTYWVKHLSDITVLDKPFDGFWVQSAYRIPDNAGANVEPGSAPARTRPIGRFNVRSFITSLTEGATVPSGRETVVR GIAFDGGYGIAEVAFSADGGRSWTEATLGQDLGKYSFREWRAAFRPPRKGAYDLRVRAVNRIGQSQPMTALWNPAGYMRN VVETTRVKAV
Sequences:
>Translated_410_residues MENRVRRRRFLKQAGALTANAVVGTTALNALAASGDKQVQLPFDNGARELVAFPQKRPLILLTSRPPQLETPFSVFNEGI LTPNDAFFVRYHWSGIPTSVDPQTYRLRIGGKVKTPLELSLADIKAIAQPMEVVAVNQCSGNSRGFLAPRVNGGQLANGA MGNARWTGVPLKAVLERAGVQPGAVQVSFNGLDRPPLDNSPDFVKSLDIDHALDGEVMLAWSMNGEDLPMLNGYPLRLVV PGHYGTYWVKHLSDITVLDKPFDGFWVQSAYRIPDNAGANVEPGSAPARTRPIGRFNVRSFITSLTEGATVPSGRETVVR GIAFDGGYGIAEVAFSADGGRSWTEATLGQDLGKYSFREWRAAFRPPRKGAYDLRVRAVNRIGQSQPMTALWNPAGYMRN VVETTRVKAV >Mature_410_residues MENRVRRRRFLKQAGALTANAVVGTTALNALAASGDKQVQLPFDNGARELVAFPQKRPLILLTSRPPQLETPFSVFNEGI LTPNDAFFVRYHWSGIPTSVDPQTYRLRIGGKVKTPLELSLADIKAIAQPMEVVAVNQCSGNSRGFLAPRVNGGQLANGA MGNARWTGVPLKAVLERAGVQPGAVQVSFNGLDRPPLDNSPDFVKSLDIDHALDGEVMLAWSMNGEDLPMLNGYPLRLVV PGHYGTYWVKHLSDITVLDKPFDGFWVQSAYRIPDNAGANVEPGSAPARTRPIGRFNVRSFITSLTEGATVPSGRETVVR GIAFDGGYGIAEVAFSADGGRSWTEATLGQDLGKYSFREWRAAFRPPRKGAYDLRVRAVNRIGQSQPMTALWNPAGYMRN VVETTRVKAV
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=373, Percent_Identity=32.7077747989276, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI74099702, Length=373, Percent_Identity=32.7077747989276, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI74099694, Length=373, Percent_Identity=32.7077747989276, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71992535, Length=367, Percent_Identity=31.8801089918256, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI18859905, Length=382, Percent_Identity=33.7696335078534, Blast_Score=138, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44686; Mature: 44686
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRVRRRRFLKQAGALTANAVVGTTALNALAASGDKQVQLPFDNGARELVAFPQKRPLI CCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCEE LLTSRPPQLETPFSVFNEGILTPNDAFFVRYHWSGIPTSVDPQTYRLRIGGKVKTPLELS EEECCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCEECCCCEEH LADIKAIAQPMEVVAVNQCSGNSRGFLAPRVNGGQLANGAMGNARWTGVPLKAVLERAGV HHHHHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHCC QPGAVQVSFNGLDRPPLDNSPDFVKSLDIDHALDGEVMLAWSMNGEDLPMLNGYPLRLVV CCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE PGHYGTYWVKHLSDITVLDKPFDGFWVQSAYRIPDNAGANVEPGSAPARTRPIGRFNVRS CCCCHHHHHHHHCCCEEECCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH FITSLTEGATVPSGRETVVRGIAFDGGYGIAEVAFSADGGRSWTEATLGQDLGKYSFREW HHHHHHCCCCCCCCHHHEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH RAAFRPPRKGAYDLRVRAVNRIGQSQPMTALWNPAGYMRNVVETTRVKAV HHHCCCCCCCCEEEEHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHEECC >Mature Secondary Structure MENRVRRRRFLKQAGALTANAVVGTTALNALAASGDKQVQLPFDNGARELVAFPQKRPLI CCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCEE LLTSRPPQLETPFSVFNEGILTPNDAFFVRYHWSGIPTSVDPQTYRLRIGGKVKTPLELS EEECCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCEECCCCEEH LADIKAIAQPMEVVAVNQCSGNSRGFLAPRVNGGQLANGAMGNARWTGVPLKAVLERAGV HHHHHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHCC QPGAVQVSFNGLDRPPLDNSPDFVKSLDIDHALDGEVMLAWSMNGEDLPMLNGYPLRLVV CCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE PGHYGTYWVKHLSDITVLDKPFDGFWVQSAYRIPDNAGANVEPGSAPARTRPIGRFNVRS CCCCHHHHHHHHCCCEEECCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH FITSLTEGATVPSGRETVVRGIAFDGGYGIAEVAFSADGGRSWTEATLGQDLGKYSFREW HHHHHHCCCCCCCCHHHEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH RAAFRPPRKGAYDLRVRAVNRIGQSQPMTALWNPAGYMRNVVETTRVKAV HHHCCCCCCCCEEEEHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA