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The map label for this gene is caiB [H]

Identifier: 94313773

GI number: 94313773

Start: 1508861

End: 1510099

Strand: Direct

Name: caiB [H]

Synonym: Rmet_4851

Alternate gene names: 94313773

Gene position: 1508861-1510099 (Clockwise)

Preceding gene: 94313771

Following gene: 94313774

Centisome position: 58.48

GC content: 68.28

Gene sequence:

>1239_bases
ATGCCGAATGCCCTTGCCTCCACTCATCCAACCGATGACGGCCTGCTCGATCTGCCTTTTGCCGGCCTGCGTGTGCTGGA
CATCAGCCAGGGCATCGCCGGCCCGTACTGCGCGCATATCCTCTGGCAGCAGGGCGCGGAGATCATCAAGGTCGAGCCGC
CGTCCGGAGACTGGGGGCGCAAGGTCGGGGTCGTGCGCGGTGATACGAGCGCGCTGAGCATTGCGTACAACGGCGGCAAA
CGCAGCATCTGCGTGGACGCCACGGTCGAAGCTGGCAAGGATGTCCTGCGCCAGCTGGCGCTGCAGGCCGACGTGGTGGT
GCAGAACTTTCGCCCGCAGGTAGCGGATCGGCTTGGCGTGGGCCATGCCGCGCTGGCGGCGCTGCGCCCCGAGCTGGTCT
ATGTCTCGATCAGCGGCTACGGTCCGGATGGCCCCTACGCCGACTACCCGGCGTCCGACTCGGTGATGCAGGCTGACAGC
GGGTTAATGTTCGCGAACCGTAGCGTCGACGGAACACCCCGCCGCATCGGCATGTTGCTGGCGGACGCCGCCACCGGCCT
CTACGCGGCCCAGGCCTGCGCCGCTGCCTTGTGCCGGCGGTACCGCACCGGGCGCGGCGGTCATGTCGAACTGAATCTGT
TTGATGCCTGCTGCGCGCTGCAGGCCAACAATCTCCTCGAGCACGCCATCGCGGGCCAGGCCGTTGCCGGCCCGGTCAGC
GCGCCCAACGGGGTCTTTGCCACCCGTGACGGCAGTGTGACGCTGCTGGCCCTGAACGATGCGCAGTTCGCCAAGCTCTG
TCACGCCCTCGACCGCGACGACTGGCTGGCTGACCCGCGCTTCGTCAACAACGCCAGTCGCATGGAACACGCGGCGCTGC
TGAACCGGCAGGTCGGCGACATCATCGTCACGCGCACTACCAGTGCGTGGCAGGAACAGTTGAGCCGGCACGACGTGCTT
CACGCCCCGGTCCGCGGCTATGCCGATGTGCTGCAGCACCCGCAGGCGGCGCACCGGCAGACATTCCAGTCGATCGAGCA
ACCGGGGCTGGGCGCTCTGCCCTTCGCCGGGATCCCGGCCCGGGCCATGCGGCGGCCCGCCGGGCCAGCCCCCGAGAATG
GTGAACACACGGTGCAGTTGCTGCAGGAAGCCGGTTTCGGCAGCCACGCCATCGACGAATGGCTGCGGCTAGGCGTGGTG
CGACAGGCAACGGCCACGTCGGCGAAGGCGATGGCATGA

Upstream 100 bases:

>100_bases
TGTCAATCATGAGTCAACACCACTGGCACAAAACGACGGATTGTCACGGCGGAGGCGTAACCCTAGCATAGGCATCGCGC
TAAATCATGCCGAACCGCCC

Downstream 100 bases:

>100_bases
TGAAGGCGCTCGTATGCAAGCAGTTCGGCGGCGTCGAGGATGTGGAACTCGCGACCGTGTCCGAACCCGCCCTGGCCGAC
CCCCATGCGGTCACGATCGA

Product: putative acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPNALASTHPTDDGLLDLPFAGLRVLDISQGIAGPYCAHILWQQGAEIIKVEPPSGDWGRKVGVVRGDTSALSIAYNGGK
RSICVDATVEAGKDVLRQLALQADVVVQNFRPQVADRLGVGHAALAALRPELVYVSISGYGPDGPYADYPASDSVMQADS
GLMFANRSVDGTPRRIGMLLADAATGLYAAQACAAALCRRYRTGRGGHVELNLFDACCALQANNLLEHAIAGQAVAGPVS
APNGVFATRDGSVTLLALNDAQFAKLCHALDRDDWLADPRFVNNASRMEHAALLNRQVGDIIVTRTTSAWQEQLSRHDVL
HAPVRGYADVLQHPQAAHRQTFQSIEQPGLGALPFAGIPARAMRRPAGPAPENGEHTVQLLQEAGFGSHAIDEWLRLGVV
RQATATSAKAMA

Sequences:

>Translated_412_residues
MPNALASTHPTDDGLLDLPFAGLRVLDISQGIAGPYCAHILWQQGAEIIKVEPPSGDWGRKVGVVRGDTSALSIAYNGGK
RSICVDATVEAGKDVLRQLALQADVVVQNFRPQVADRLGVGHAALAALRPELVYVSISGYGPDGPYADYPASDSVMQADS
GLMFANRSVDGTPRRIGMLLADAATGLYAAQACAAALCRRYRTGRGGHVELNLFDACCALQANNLLEHAIAGQAVAGPVS
APNGVFATRDGSVTLLALNDAQFAKLCHALDRDDWLADPRFVNNASRMEHAALLNRQVGDIIVTRTTSAWQEQLSRHDVL
HAPVRGYADVLQHPQAAHRQTFQSIEQPGLGALPFAGIPARAMRRPAGPAPENGEHTVQLLQEAGFGSHAIDEWLRLGVV
RQATATSAKAMA
>Mature_411_residues
PNALASTHPTDDGLLDLPFAGLRVLDISQGIAGPYCAHILWQQGAEIIKVEPPSGDWGRKVGVVRGDTSALSIAYNGGKR
SICVDATVEAGKDVLRQLALQADVVVQNFRPQVADRLGVGHAALAALRPELVYVSISGYGPDGPYADYPASDSVMQADSG
LMFANRSVDGTPRRIGMLLADAATGLYAAQACAAALCRRYRTGRGGHVELNLFDACCALQANNLLEHAIAGQAVAGPVSA
PNGVFATRDGSVTLLALNDAQFAKLCHALDRDDWLADPRFVNNASRMEHAALLNRQVGDIIVTRTTSAWQEQLSRHDVLH
APVRGYADVLQHPQAAHRQTFQSIEQPGLGALPFAGIPARAMRRPAGPAPENGEHTVQLLQEAGFGSHAIDEWLRLGVVR
QATATSAKAMA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=31.8987341772152, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=30.166270783848, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=28.2660332541568, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI300863126, Length=390, Percent_Identity=27.6923076923077, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI266456254, Length=382, Percent_Identity=27.4869109947644, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI42794625, Length=382, Percent_Identity=27.4869109947644, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI266458393, Length=202, Percent_Identity=31.1881188118812, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI266458397, Length=202, Percent_Identity=31.1881188118812, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI87082093, Length=328, Percent_Identity=33.5365853658537, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1788717, Length=408, Percent_Identity=26.7156862745098, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786222, Length=407, Percent_Identity=22.3587223587224, Blast_Score=78, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24648431, Length=394, Percent_Identity=34.5177664974619, Blast_Score=187, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24585488, Length=362, Percent_Identity=23.2044198895028, Blast_Score=95, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43732; Mature: 43601

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNALASTHPTDDGLLDLPFAGLRVLDISQGIAGPYCAHILWQQGAEIIKVEPPSGDWGR
CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC
KVGVVRGDTSALSIAYNGGKRSICVDATVEAGKDVLRQLALQADVVVQNFRPQVADRLGV
EEEEEECCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GHAALAALRPELVYVSISGYGPDGPYADYPASDSVMQADSGLMFANRSVDGTPRRIGMLL
CHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHH
ADAATGLYAAQACAAALCRRYRTGRGGHVELNLFDACCALQANNLLEHAIAGQAVAGPVS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APNGVFATRDGSVTLLALNDAQFAKLCHALDRDDWLADPRFVNNASRMEHAALLNRQVGD
CCCCEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
IIVTRTTSAWQEQLSRHDVLHAPVRGYADVLQHPQAAHRQTFQSIEQPGLGALPFAGIPA
EEEEECCHHHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCH
RAMRRPAGPAPENGEHTVQLLQEAGFGSHAIDEWLRLGVVRQATATSAKAMA
HHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNALASTHPTDDGLLDLPFAGLRVLDISQGIAGPYCAHILWQQGAEIIKVEPPSGDWGR
CCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC
KVGVVRGDTSALSIAYNGGKRSICVDATVEAGKDVLRQLALQADVVVQNFRPQVADRLGV
EEEEEECCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GHAALAALRPELVYVSISGYGPDGPYADYPASDSVMQADSGLMFANRSVDGTPRRIGMLL
CHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHH
ADAATGLYAAQACAAALCRRYRTGRGGHVELNLFDACCALQANNLLEHAIAGQAVAGPVS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APNGVFATRDGSVTLLALNDAQFAKLCHALDRDDWLADPRFVNNASRMEHAALLNRQVGD
CCCCEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
IIVTRTTSAWQEQLSRHDVLHAPVRGYADVLQHPQAAHRQTFQSIEQPGLGALPFAGIPA
EEEEECCHHHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCH
RAMRRPAGPAPENGEHTVQLLQEAGFGSHAIDEWLRLGVVRQATATSAKAMA
HHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]