| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313760
Identifier: 94313760
GI number: 94313760
Start: 1494371
End: 1495951
Strand: Reverse
Name: 94313760
Synonym: Rmet_4838
Alternate gene names: NA
Gene position: 1495951-1494371 (Counterclockwise)
Preceding gene: 94313770
Following gene: 94313759
Centisome position: 57.98
GC content: 66.6
Gene sequence:
>1581_bases ATGGTTAACCCCAAATCGAGCGCACGGAAGTGGCAGCGCCTGCTGGCGCTGCTGGCCACGGCAACGTTCCTGGCGGCCTG CGCCCAGACGCCGCCATCGGGGGCGACGCAGCCCGGCAGCCTGTCGTCGGCCGACCTGCGCTGGCTGAACACGGTCAGCT TCGGCGCTGACCAGGCCAGCGTGCAGCGCCTCCAGACGATCGGACGCGAGCGTTATCTGGAAGAGCAGTTGCACACGCCG CTGGCAGACCCGCAACCGGTGGCGGCGGCAATCGCGGCGCTGCCCGTCAGCCAGGGCGATGCCGTACAGCGCCAGCAGGC CGTGCGCGCCGAGCGGGAGCGCATCAACACGCTTACCGACGAATCCGAGAAGCAGCAGGCGCGTCAGGCGATCAACCGCC AGACGCGGGAACTCGTGCTCGACACCGAGCGTCGTCATCTGCTGAGGGCGTTGTACTCGCCCGGCCAGTTGCGCGAGCAG ATGACCTGGTTCTGGATGAACCACTTCAGCGTCTATGCGGCCAAGGGGCAGGTCGGGTCGATGCTGCCCGAGTATGAGGA GCGCGCGATCCGTCCGCACGCGCTGGGCAAGTTCCGGGATCTGGTGATGGCGACGGTGACCTCACCGGCCATGCTGGTGT ATCTGGACAACGCGCAGAGCGCGGCCAATCGCATCAACGAGAACTACGCGCGCGAGCTGATGGAGTTGCACACGCTGGGC ATATCGGGCGGACCCAGCGGCTCGCGCTACACGCAGCAGGACGTGCAGGAACTGGCACGCGTGCTGACCGGGCTGGGTGT GAACCTGCGCGGAGAGCCGCCGAAGCTAGGGCCGGCGCGCGCGGCCATGTATCGCAGCGACGGGCTGTTCGAATTCAATC CGAATCGCCATGATTTCGGTTCCAAGGTGCTGCTGGGCCAGCGCATCGAGCCCACTGGCTACAGCGAGGTGGAGCGGGCC GTGACCATCCTGTCGCGCGATCCGGCCACGGCGCGCTTTATCTCGGCGAAGCTGGCCACGTACTTCGTGTCCGATACCCC GCCGCAGGCATTGGTCGACCGGATGGCCGCCACGTTCACGCGTACCGACGGCGATATCGGCGCGGTGCTGCGGACGATGC TGCTGTCGAAAGAGTTCGACAGTGCCGCGGCCCACGGCGCGCGCAAGTTCAAGGATCCGATGGTTTTTGTGGTCTCGTCG ATGCGCCTGGCCTATGACGGACGGCCAGTCACCAATCTGCGTCCGGTAATCAACTGGCTCAATCAGTTGGGCGAGCCGCT GTATGGCCACGTGACGCCGGACGGCTACCCGGCCGCCGAAAGCGCGTGGGCCAGTTCGGGCCAACTGGTGCGGCGCTTCG AGATCGCGCGGACCATCGGCAACGGCCCGGCGGGCCTGTTCACTGGCGAGGATGGCCAACCCACGCAGCGGCGTGGTTTT CCGATGCCGAATAGCCGCATGTTCTACGACACGATCGAAGCCACGCTGGGCCCCGCCACGCGCGGCGCGCTGGCGCAGGC CGGGTCTCAGCAGGAATGGAATGCGGTATTGCTGAGTTCGCCCGAATGGATGCAACGTTGA
Upstream 100 bases:
>100_bases TCTCGTAACAGACTCGGTACCTTTGGCCGTCAACCAACCGCATCGTCCAGGCGTCAAACCGGCATTCCCATCTGTATCTG TCATAGAAGAGGGTGTCCTC
Downstream 100 bases:
>100_bases GTGCGCAAGGAGCATGTCATGAATCGACGTGATTGGCTCAGGACCCTGGGTGGCGCGGGGCTGGCCCTGACGCTGCCGAC GATGTCGTCGCGCGTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MVNPKSSARKWQRLLALLATATFLAACAQTPPSGATQPGSLSSADLRWLNTVSFGADQASVQRLQTIGRERYLEEQLHTP LADPQPVAAAIAALPVSQGDAVQRQQAVRAERERINTLTDESEKQQARQAINRQTRELVLDTERRHLLRALYSPGQLREQ MTWFWMNHFSVYAAKGQVGSMLPEYEERAIRPHALGKFRDLVMATVTSPAMLVYLDNAQSAANRINENYARELMELHTLG ISGGPSGSRYTQQDVQELARVLTGLGVNLRGEPPKLGPARAAMYRSDGLFEFNPNRHDFGSKVLLGQRIEPTGYSEVERA VTILSRDPATARFISAKLATYFVSDTPPQALVDRMAATFTRTDGDIGAVLRTMLLSKEFDSAAAHGARKFKDPMVFVVSS MRLAYDGRPVTNLRPVINWLNQLGEPLYGHVTPDGYPAAESAWASSGQLVRRFEIARTIGNGPAGLFTGEDGQPTQRRGF PMPNSRMFYDTIEATLGPATRGALAQAGSQQEWNAVLLSSPEWMQR
Sequences:
>Translated_526_residues MVNPKSSARKWQRLLALLATATFLAACAQTPPSGATQPGSLSSADLRWLNTVSFGADQASVQRLQTIGRERYLEEQLHTP LADPQPVAAAIAALPVSQGDAVQRQQAVRAERERINTLTDESEKQQARQAINRQTRELVLDTERRHLLRALYSPGQLREQ MTWFWMNHFSVYAAKGQVGSMLPEYEERAIRPHALGKFRDLVMATVTSPAMLVYLDNAQSAANRINENYARELMELHTLG ISGGPSGSRYTQQDVQELARVLTGLGVNLRGEPPKLGPARAAMYRSDGLFEFNPNRHDFGSKVLLGQRIEPTGYSEVERA VTILSRDPATARFISAKLATYFVSDTPPQALVDRMAATFTRTDGDIGAVLRTMLLSKEFDSAAAHGARKFKDPMVFVVSS MRLAYDGRPVTNLRPVINWLNQLGEPLYGHVTPDGYPAAESAWASSGQLVRRFEIARTIGNGPAGLFTGEDGQPTQRRGF PMPNSRMFYDTIEATLGPATRGALAQAGSQQEWNAVLLSSPEWMQR >Mature_526_residues MVNPKSSARKWQRLLALLATATFLAACAQTPPSGATQPGSLSSADLRWLNTVSFGADQASVQRLQTIGRERYLEEQLHTP LADPQPVAAAIAALPVSQGDAVQRQQAVRAERERINTLTDESEKQQARQAINRQTRELVLDTERRHLLRALYSPGQLREQ MTWFWMNHFSVYAAKGQVGSMLPEYEERAIRPHALGKFRDLVMATVTSPAMLVYLDNAQSAANRINENYARELMELHTLG ISGGPSGSRYTQQDVQELARVLTGLGVNLRGEPPKLGPARAAMYRSDGLFEFNPNRHDFGSKVLLGQRIEPTGYSEVERA VTILSRDPATARFISAKLATYFVSDTPPQALVDRMAATFTRTDGDIGAVLRTMLLSKEFDSAAAHGARKFKDPMVFVVSS MRLAYDGRPVTNLRPVINWLNQLGEPLYGHVTPDGYPAAESAWASSGQLVRRFEIARTIGNGPAGLFTGEDGQPTQRRGF PMPNSRMFYDTIEATLGPATRGALAQAGSQQEWNAVLLSSPEWMQR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58053; Mature: 58053
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNPKSSARKWQRLLALLATATFLAACAQTPPSGATQPGSLSSADLRWLNTVSFGADQAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH VQRLQTIGRERYLEEQLHTPLADPQPVAAAIAALPVSQGDAVQRQQAVRAERERINTLTD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC ESEKQQARQAINRQTRELVLDTERRHLLRALYSPGQLREQMTWFWMNHFSVYAAKGQVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHH MLPEYEERAIRPHALGKFRDLVMATVTSPAMLVYLDNAQSAANRINENYARELMELHTLG CCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC ISGGPSGSRYTQQDVQELARVLTGLGVNLRGEPPKLGPARAAMYRSDGLFEFNPNRHDFG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC SKVLLGQRIEPTGYSEVERAVTILSRDPATARFISAKLATYFVSDTPPQALVDRMAATFT CEEHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RTDGDIGAVLRTMLLSKEFDSAAAHGARKFKDPMVFVVSSMRLAYDGRPVTNLRPVINWL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH NQLGEPLYGHVTPDGYPAAESAWASSGQLVRRFEIARTIGNGPAGLFTGEDGQPTQRRGF HHHCCCCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC PMPNSRMFYDTIEATLGPATRGALAQAGSQQEWNAVLLSSPEWMQR CCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCHHHCC >Mature Secondary Structure MVNPKSSARKWQRLLALLATATFLAACAQTPPSGATQPGSLSSADLRWLNTVSFGADQAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH VQRLQTIGRERYLEEQLHTPLADPQPVAAAIAALPVSQGDAVQRQQAVRAERERINTLTD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC ESEKQQARQAINRQTRELVLDTERRHLLRALYSPGQLREQMTWFWMNHFSVYAAKGQVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHH MLPEYEERAIRPHALGKFRDLVMATVTSPAMLVYLDNAQSAANRINENYARELMELHTLG CCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC ISGGPSGSRYTQQDVQELARVLTGLGVNLRGEPPKLGPARAAMYRSDGLFEFNPNRHDFG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC SKVLLGQRIEPTGYSEVERAVTILSRDPATARFISAKLATYFVSDTPPQALVDRMAATFT CEEHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RTDGDIGAVLRTMLLSKEFDSAAAHGARKFKDPMVFVVSSMRLAYDGRPVTNLRPVINWL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH NQLGEPLYGHVTPDGYPAAESAWASSGQLVRRFEIARTIGNGPAGLFTGEDGQPTQRRGF HHHCCCCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC PMPNSRMFYDTIEATLGPATRGALAQAGSQQEWNAVLLSSPEWMQR CCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA