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The map label for this gene is ydhK [H]

Identifier: 94313715

GI number: 94313715

Start: 1436976

End: 1438955

Strand: Reverse

Name: ydhK [H]

Synonym: Rmet_4793

Alternate gene names: 94313715

Gene position: 1438955-1436976 (Counterclockwise)

Preceding gene: 94313716

Following gene: 94313714

Centisome position: 55.77

GC content: 64.85

Gene sequence:

>1980_bases
ATGGGTAGTTGGCCGTCCGCGAGAGATTGGGTCTTTTCCATCAAGGCCTTCGTCGCAGCGATGCTGGCATTGTGGATTGC
GATGTATCTCGGCCTGCCGCGCCCCTACTGGGCGATGGGCTCCGTCTATATCGTGGCGCATCCGCTGACCGGCGCCACGC
GCTCCAAGGCGCTGTATCGCGTGCTGGGCACGCTGCTGGGCGCCGCCGCTGGCATTCTGATGGTCCCGCCACTGGTCAAC
GCGCCGCCTCTGCTGATGGGCGCCGTGGCGATCTGGACCGCCTGCCTCTTGTACGTGGCGCTGCTGCATCGCACGCCGCG
CAGCTATGTCTTCATGTTGGCGGCCTATACGTTGCCGCTCGTCGCGCTGCCTTCGGTCGATAATCCAGCCGGTATCTTCG
ATCTTGCCGTCGCGCGGTCCGAGGAAATCTGCCTGGGCATCCTGTGCGCCAGCGTGGTTGGCGCGGTCGTGTTTCCGGCC
AGCGTAGCCAATGTGCTGCGCGACAAGTCTCGCCAATGGATGGCCGATGCGACGCTGTGGGCGAGTGACATGCTGTCGGC
AAGCCCCGGCAAGCAGGTGTCGCGCCACCATAGTCGCCATCGTCTGGCCGCCGATATCCTGGCGCTGGACCAACTCATCA
GCCAACTGAGCTACGACGCCGAAAGTGCCCAGCGTGTGCGTGCCGCGCGTGAGCTGCGTGGCCGCATGACGATGCTGCTG
CCCGTGATGTCGTCGCTGGCGACCGTCGTCGAATCGATGCAGTCCGCCGGCGGCGTGCCGGAACCCCTGGCCGCGCAGAT
GCGGGCGGTGAAGGCCTGGATTCAGGCGGGCGCCGCGGAAGGGGAGCGTCCCGAACTGACGTCCACGCCCGTCCAGGCGG
GTTGGGATGCCGCCTTGGTCGCAGCAGCCGAAGATCGTCTGCAACAGATGGCGGCCTTGTGGCACGACTGCGTCTCGCTG
TGCCGCCGCCTTGGTGAAAAGCACATCGAAGGCGAATGGCTGCCGGAGTTCCTGCGTTGGGATGTTGGCCGCGCCCGCCA
CTACGACCACGGCATGCTGCTGTTCTCGACCGTGACGGTGGCGCTGGCCATCTTCGCGATGGGCATGATCTGGATTCACA
CTGGCTGGGCCGATGGAGCTGGTGCTGTGGCGCTTGGCGCAATCTCGTGCTGTTTCTTCGCCGCGCTCGACGAGCCCGCG
CCGATGATCCAGTCGTTCTTCAACTGGAACGTGGTTTGCCTGCTGATCTCGATGGTGATGCTGTTCGCGGTCCTGCCGAT
CGCGCACGATTTCGAGATGCTGGTGCTGATGTTCGCGGTGCCGTACCTGATCATCGGCCTGCTGGTGGCGCAGCCGCGCC
TGGCGATGATCGGGATGCCGCTGGCCGTGGTTACGGCAAACGACATCGGTATCTCGGGCGCCTACAGCGCGAATTTCCAG
AGTTTCTTCAACAGCAACCTGGCAGGTATCGCCGGGATTGCGTTCGCCCTGGTCTGGACGTTGGCGGTGCGGCCTTTCGG
TACGCGAGCCGCAACGCGCCGGCTGGTGCGCTCCGGCTGGAGTGACATCGCCGAGAACGCCGTGAGTACGCGTCCGGAGT
CTCATTCGACGCTGCGCGCGCGGATGCTCGATCGTCTGGCACAACTCGTGCCCCGGCTGGCTGCGAGCGAAAGCGAAGTA
TCTGCCGACGGCTTCAGCGAAGTGCGTGTGGAACTCTGCACGCTGGCGCTGCAACGCGAGATGGCGGAGCTGGAAGCCGA
TGAGCAGCATGCAGTGAATCGCGTGCTGCGCAGCGTGTCCGGCTATTACCAGTCACGTTTGAAAGGTGCCATCGATGCGC
CGCCGCCGGCGTTGCTGACGCGACTGGGCAAGGCCCAGCAGAAGGTGCGTTCGCGTATCGCACTGGCGGCTCTCGTGGAC
CTTCAGGTTGCCCTGTTTCCGCCGGTCGTGGTGCCGGCAACCGTTTCCGGAAAAGCATGA

Upstream 100 bases:

>100_bases
CCGATATCAGCGAATCGGACATGGCGGCCACGTTGCGTGTGTTCGACGCCCTGGCGCGCGCGGCTGCATCTACATCGGGC
AAGCAGGAGTCCTGAGCAAC

Downstream 100 bases:

>100_bases
TGCCCGGTGAAATCAGTATCTATGGCGTGTACATCCCCAGCTTGCTGGTGTGGATGCTTGCCGCCTTCGTCATTACGAGC
GCCGCGCGGGCGGTGCTGAC

Product: putative inner membrane efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MGSWPSARDWVFSIKAFVAAMLALWIAMYLGLPRPYWAMGSVYIVAHPLTGATRSKALYRVLGTLLGAAAGILMVPPLVN
APPLLMGAVAIWTACLLYVALLHRTPRSYVFMLAAYTLPLVALPSVDNPAGIFDLAVARSEEICLGILCASVVGAVVFPA
SVANVLRDKSRQWMADATLWASDMLSASPGKQVSRHHSRHRLAADILALDQLISQLSYDAESAQRVRAARELRGRMTMLL
PVMSSLATVVESMQSAGGVPEPLAAQMRAVKAWIQAGAAEGERPELTSTPVQAGWDAALVAAAEDRLQQMAALWHDCVSL
CRRLGEKHIEGEWLPEFLRWDVGRARHYDHGMLLFSTVTVALAIFAMGMIWIHTGWADGAGAVALGAISCCFFAALDEPA
PMIQSFFNWNVVCLLISMVMLFAVLPIAHDFEMLVLMFAVPYLIIGLLVAQPRLAMIGMPLAVVTANDIGISGAYSANFQ
SFFNSNLAGIAGIAFALVWTLAVRPFGTRAATRRLVRSGWSDIAENAVSTRPESHSTLRARMLDRLAQLVPRLAASESEV
SADGFSEVRVELCTLALQREMAELEADEQHAVNRVLRSVSGYYQSRLKGAIDAPPPALLTRLGKAQQKVRSRIALAALVD
LQVALFPPVVVPATVSGKA

Sequences:

>Translated_659_residues
MGSWPSARDWVFSIKAFVAAMLALWIAMYLGLPRPYWAMGSVYIVAHPLTGATRSKALYRVLGTLLGAAAGILMVPPLVN
APPLLMGAVAIWTACLLYVALLHRTPRSYVFMLAAYTLPLVALPSVDNPAGIFDLAVARSEEICLGILCASVVGAVVFPA
SVANVLRDKSRQWMADATLWASDMLSASPGKQVSRHHSRHRLAADILALDQLISQLSYDAESAQRVRAARELRGRMTMLL
PVMSSLATVVESMQSAGGVPEPLAAQMRAVKAWIQAGAAEGERPELTSTPVQAGWDAALVAAAEDRLQQMAALWHDCVSL
CRRLGEKHIEGEWLPEFLRWDVGRARHYDHGMLLFSTVTVALAIFAMGMIWIHTGWADGAGAVALGAISCCFFAALDEPA
PMIQSFFNWNVVCLLISMVMLFAVLPIAHDFEMLVLMFAVPYLIIGLLVAQPRLAMIGMPLAVVTANDIGISGAYSANFQ
SFFNSNLAGIAGIAFALVWTLAVRPFGTRAATRRLVRSGWSDIAENAVSTRPESHSTLRARMLDRLAQLVPRLAASESEV
SADGFSEVRVELCTLALQREMAELEADEQHAVNRVLRSVSGYYQSRLKGAIDAPPPALLTRLGKAQQKVRSRIALAALVD
LQVALFPPVVVPATVSGKA
>Mature_658_residues
GSWPSARDWVFSIKAFVAAMLALWIAMYLGLPRPYWAMGSVYIVAHPLTGATRSKALYRVLGTLLGAAAGILMVPPLVNA
PPLLMGAVAIWTACLLYVALLHRTPRSYVFMLAAYTLPLVALPSVDNPAGIFDLAVARSEEICLGILCASVVGAVVFPAS
VANVLRDKSRQWMADATLWASDMLSASPGKQVSRHHSRHRLAADILALDQLISQLSYDAESAQRVRAARELRGRMTMLLP
VMSSLATVVESMQSAGGVPEPLAAQMRAVKAWIQAGAAEGERPELTSTPVQAGWDAALVAAAEDRLQQMAALWHDCVSLC
RRLGEKHIEGEWLPEFLRWDVGRARHYDHGMLLFSTVTVALAIFAMGMIWIHTGWADGAGAVALGAISCCFFAALDEPAP
MIQSFFNWNVVCLLISMVMLFAVLPIAHDFEMLVLMFAVPYLIIGLLVAQPRLAMIGMPLAVVTANDIGISGAYSANFQS
FFNSNLAGIAGIAFALVWTLAVRPFGTRAATRRLVRSGWSDIAENAVSTRPESHSTLRARMLDRLAQLVPRLAASESEVS
ADGFSEVRVELCTLALQREMAELEADEQHAVNRVLRSVSGYYQSRLKGAIDAPPPALLTRLGKAQQKVRSRIALAALVDL
QVALFPPVVVPATVSGKA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]

Homologues:

Organism=Escherichia coli, GI1787933, Length=547, Percent_Identity=25.7769652650823, Blast_Score=122, Evalue=9e-29,
Organism=Escherichia coli, GI1789636, Length=557, Percent_Identity=24.2369838420108, Blast_Score=112, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 71200; Mature: 71069

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSWPSARDWVFSIKAFVAAMLALWIAMYLGLPRPYWAMGSVYIVAHPLTGATRSKALYR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCHHHHHHHH
VLGTLLGAAAGILMVPPLVNAPPLLMGAVAIWTACLLYVALLHRTPRSYVFMLAAYTLPL
HHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VALPSVDNPAGIFDLAVARSEEICLGILCASVVGAVVFPASVANVLRDKSRQWMADATLW
HCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASDMLSASPGKQVSRHHSRHRLAADILALDQLISQLSYDAESAQRVRAARELRGRMTMLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PVMSSLATVVESMQSAGGVPEPLAAQMRAVKAWIQAGAAEGERPELTSTPVQAGWDAALV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
AAAEDRLQQMAALWHDCVSLCRRLGEKHIEGEWLPEFLRWDVGRARHYDHGMLLFSTVTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHHH
ALAIFAMGMIWIHTGWADGAGAVALGAISCCFFAALDEPAPMIQSFFNWNVVCLLISMVM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
LFAVLPIAHDFEMLVLMFAVPYLIIGLLVAQPRLAMIGMPLAVVTANDIGISGAYSANFQ
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHH
SFFNSNLAGIAGIAFALVWTLAVRPFGTRAATRRLVRSGWSDIAENAVSTRPESHSTLRA
HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMLDRLAQLVPRLAASESEVSADGFSEVRVELCTLALQREMAELEADEQHAVNRVLRSVS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GYYQSRLKGAIDAPPPALLTRLGKAQQKVRSRIALAALVDLQVALFPPVVVPATVSGKA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure 
GSWPSARDWVFSIKAFVAAMLALWIAMYLGLPRPYWAMGSVYIVAHPLTGATRSKALYR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCHHHHHHHH
VLGTLLGAAAGILMVPPLVNAPPLLMGAVAIWTACLLYVALLHRTPRSYVFMLAAYTLPL
HHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VALPSVDNPAGIFDLAVARSEEICLGILCASVVGAVVFPASVANVLRDKSRQWMADATLW
HCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASDMLSASPGKQVSRHHSRHRLAADILALDQLISQLSYDAESAQRVRAARELRGRMTMLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PVMSSLATVVESMQSAGGVPEPLAAQMRAVKAWIQAGAAEGERPELTSTPVQAGWDAALV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
AAAEDRLQQMAALWHDCVSLCRRLGEKHIEGEWLPEFLRWDVGRARHYDHGMLLFSTVTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHHH
ALAIFAMGMIWIHTGWADGAGAVALGAISCCFFAALDEPAPMIQSFFNWNVVCLLISMVM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
LFAVLPIAHDFEMLVLMFAVPYLIIGLLVAQPRLAMIGMPLAVVTANDIGISGAYSANFQ
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHH
SFFNSNLAGIAGIAFALVWTLAVRPFGTRAATRRLVRSGWSDIAENAVSTRPESHSTLRA
HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMLDRLAQLVPRLAASESEVSADGFSEVRVELCTLALQREMAELEADEQHAVNRVLRSVS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GYYQSRLKGAIDAPPPALLTRLGKAQQKVRSRIALAALVDLQVALFPPVVVPATVSGKA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]