| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313675
Identifier: 94313675
GI number: 94313675
Start: 1397699
End: 1398373
Strand: Direct
Name: 94313675
Synonym: Rmet_4753
Alternate gene names: NA
Gene position: 1397699-1398373 (Clockwise)
Preceding gene: 94313673
Following gene: 94313678
Centisome position: 54.17
GC content: 65.04
Gene sequence:
>675_bases ATGCCTGCCTGTCGGCTCGGATGTTGCACCGACCACGCAGTCAGACGCATCGCGGGAGACGGATCACGGGAACCGTCCCC GGCACCGTTATCCTGCATGACCATACGATATAAGCCGTTAATTGCCTCGCTGAGCCTGGTTGCGATCGCAGCCCTGCCGC CGTTGCCCGCATGGGCCGCGCCGGGCAGGCCGACCGCGACGCCGGCTCCGTCTTCCGCGCCCGTGGCGGTGGACGAAGCC GACGCCCTGGCGAGAATGCTCAAGGGTGCCGCCACCGGTCAGAACACGGGCGCCGCCGGCGTGCCGGAACTCCTGCGCAA TACCAATCGCCCGGACAGCGTGCTGGCGCGCGCCTGCCGCCAGCTCAACGATGCGCTGCCGATCGAGATCGACGGAGAGA CTCGCCTGCGGCGCTGTCAGTCGATTCCAGGCAAGCACATCCTGTTTCAGCTGGAACTGACCAACTACCGTGGCCCGATG CTCGACCTCGCCAGCTTCGAGGTCAACTACGCGGCGCCGCTACAGCGCAACATCTGCGCTAACCGCGACGTCGAGATCCT AACCAAGCTCGGCATCAGCATGATGTTCCGCTATATGACTCGCAACGATCGCGGCGAGCGTCGTGTCGGCGACGTCTATA TCAACGCCCCGATCTGTACCGCCGCGTTGCGATAA
Upstream 100 bases:
>100_bases GTCGGGGAAGCAAGGATGTTGGCATCGATCGCCAGGCAACCCGCCACCGGTGCGGAACATTGTTGGACTGGCTTTCACGC GCGGCGGGGTGGAGGGTACA
Downstream 100 bases:
>100_bases CCCGTTTCAAACAAGTGCCACACGCCTGCATGCAGGCGGATTCGGCATCGGCCAGAGTGCCATCCTCAAACCGATGCTGT CGTGGTCCCTTCGCCCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPACRLGCCTDHAVRRIAGDGSREPSPAPLSCMTIRYKPLIASLSLVAIAALPPLPAWAAPGRPTATPAPSSAPVAVDEA DALARMLKGAATGQNTGAAGVPELLRNTNRPDSVLARACRQLNDALPIEIDGETRLRRCQSIPGKHILFQLELTNYRGPM LDLASFEVNYAAPLQRNICANRDVEILTKLGISMMFRYMTRNDRGERRVGDVYINAPICTAALR
Sequences:
>Translated_224_residues MPACRLGCCTDHAVRRIAGDGSREPSPAPLSCMTIRYKPLIASLSLVAIAALPPLPAWAAPGRPTATPAPSSAPVAVDEA DALARMLKGAATGQNTGAAGVPELLRNTNRPDSVLARACRQLNDALPIEIDGETRLRRCQSIPGKHILFQLELTNYRGPM LDLASFEVNYAAPLQRNICANRDVEILTKLGISMMFRYMTRNDRGERRVGDVYINAPICTAALR >Mature_223_residues PACRLGCCTDHAVRRIAGDGSREPSPAPLSCMTIRYKPLIASLSLVAIAALPPLPAWAAPGRPTATPAPSSAPVAVDEAD ALARMLKGAATGQNTGAAGVPELLRNTNRPDSVLARACRQLNDALPIEIDGETRLRRCQSIPGKHILFQLELTNYRGPML DLASFEVNYAAPLQRNICANRDVEILTKLGISMMFRYMTRNDRGERRVGDVYINAPICTAALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24159; Mature: 24028
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPACRLGCCTDHAVRRIAGDGSREPSPAPLSCMTIRYKPLIASLSLVAIAALPPLPAWAA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC PGRPTATPAPSSAPVAVDEADALARMLKGAATGQNTGAAGVPELLRNTNRPDSVLARACR CCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH QLNDALPIEIDGETRLRRCQSIPGKHILFQLELTNYRGPMLDLASFEVNYAAPLQRNICA HHCCCCCEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCHHHHHCC NRDVEILTKLGISMMFRYMTRNDRGERRVGDVYINAPICTAALR CCCHHHHHHHHHHHHHHHHHCCCCCCCEECEEEECCCHHHHCCC >Mature Secondary Structure PACRLGCCTDHAVRRIAGDGSREPSPAPLSCMTIRYKPLIASLSLVAIAALPPLPAWAA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC PGRPTATPAPSSAPVAVDEADALARMLKGAATGQNTGAAGVPELLRNTNRPDSVLARACR CCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH QLNDALPIEIDGETRLRRCQSIPGKHILFQLELTNYRGPMLDLASFEVNYAAPLQRNICA HHCCCCCEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCHHHHHCC NRDVEILTKLGISMMFRYMTRNDRGERRVGDVYINAPICTAALR CCCHHHHHHHHHHHHHHHHHCCCCCCCEECEEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA