| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313600
Identifier: 94313600
GI number: 94313600
Start: 1309482
End: 1310540
Strand: Reverse
Name: 94313600
Synonym: Rmet_4678
Alternate gene names: NA
Gene position: 1310540-1309482 (Counterclockwise)
Preceding gene: 94313601
Following gene: 94313599
Centisome position: 50.79
GC content: 66.95
Gene sequence:
>1059_bases ATGAAACGATGGAAGCAACGGCCCGAAGGCGCCAACTGGGGCGATTTCGGCGATGACGACCAACTCGGCCGCCTGAACCT GATTACCGCGGACCGCGTGCTTGCCGCCGCGCGCGAAATTCGCAGCGGCAAGACGTTCTGCCTGTCTCTGCCGCTCGATC TGCCGGGCGGCAATGTTCTCAATCCACGCCGGCATCCGCCGGTGCTGCGTCCCACGTTCCGTGACGACGTGGCGTACGTC AACTTTCCGCTGGCCAAGGTCGACCCAAACGCGCTTGATGTCCTGAGCGACGACCAGGTACTGCTGTCGATGCAGTACTC GACGCAGTGGGATTCCCTGGCGCACGTCGGCGCGCTGTTCGATGCCGACGGCGACGGCGTGGCCGAGCGGGTCTACTACA ACGGCTTTCGCCCCAATACCGACATCGTCGGCCCGGTGGACTACGCGGAAGACGATCATTTCTCCGCGCACCCGTGCGGC CATGACCACAGCCACGCCGACGCGCTCGGCATCGAGACCTTCGCCGCGCACGGTATCCAGGCGCGTGGCGTGCTGGTCGA CCTGGCCGCGCATTACGGGCGCGAGTGCCGCACGGTCGGATACGACGACCTGATGCGCGTGATCGAGGCCGATGGCATCG TGGTCGAACCCGGCGACATCCTTGTGCTGCGCACCGGGTTTGCCGAGATGGTGATGGAGATGGCCGGGCAACCCGACGCC GAGGTGCTGCACCATAGCTGCTGCGCGCTGGACGGCCGCGACGAACGCCTGCTGCAATGGATCACCGATTCCGGCATCGC CGCAATCGCCGCGGACAACTACGCCGTGGAGCGCTATCCGGCACGGCCGGCGCCGGAGGGAGCAGGGCCAGTGCCGATGC TGCCCCTGCATCATCATTGCCTGTTCAAGCTCGGCCTGCCGCTGGGCGAGCTGTGGTACCTGCGCGATCTCGCCGCATGG CTGCGTGCCGAGGGTCGTCATCACTTTTTCCTGTCGGCGCCGCCGCTGCGGCTGCCGGGTGCGATGGGGTCGCCGGTGAC GCCCGTCGCCACCGTCTGA
Upstream 100 bases:
>100_bases TTCACGGCCGGCCTGTTCGCCGACATCCGGATCGTGCGCTGGCGCAAGGCGTATCTGGATGGCGTCTGCCGTCTCTGAAC GCCAGTCCGGAGCGCCAGCG
Downstream 100 bases:
>100_bases TTTCGCCGGATTCACAAGGAGCCCCCACATGCTGTTCATGGTGGAAATGACCGTCCGTATCCCCCAATCGCTCGACCCGG AAGTGGCCGATGCGATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase Family Protein; Metal-Dependent Hydrolase; Yclase SCIF3.09c; Conserved Protein; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKRWKQRPEGANWGDFGDDDQLGRLNLITADRVLAAAREIRSGKTFCLSLPLDLPGGNVLNPRRHPPVLRPTFRDDVAYV NFPLAKVDPNALDVLSDDQVLLSMQYSTQWDSLAHVGALFDADGDGVAERVYYNGFRPNTDIVGPVDYAEDDHFSAHPCG HDHSHADALGIETFAAHGIQARGVLVDLAAHYGRECRTVGYDDLMRVIEADGIVVEPGDILVLRTGFAEMVMEMAGQPDA EVLHHSCCALDGRDERLLQWITDSGIAAIAADNYAVERYPARPAPEGAGPVPMLPLHHHCLFKLGLPLGELWYLRDLAAW LRAEGRHHFFLSAPPLRLPGAMGSPVTPVATV
Sequences:
>Translated_352_residues MKRWKQRPEGANWGDFGDDDQLGRLNLITADRVLAAAREIRSGKTFCLSLPLDLPGGNVLNPRRHPPVLRPTFRDDVAYV NFPLAKVDPNALDVLSDDQVLLSMQYSTQWDSLAHVGALFDADGDGVAERVYYNGFRPNTDIVGPVDYAEDDHFSAHPCG HDHSHADALGIETFAAHGIQARGVLVDLAAHYGRECRTVGYDDLMRVIEADGIVVEPGDILVLRTGFAEMVMEMAGQPDA EVLHHSCCALDGRDERLLQWITDSGIAAIAADNYAVERYPARPAPEGAGPVPMLPLHHHCLFKLGLPLGELWYLRDLAAW LRAEGRHHFFLSAPPLRLPGAMGSPVTPVATV >Mature_352_residues MKRWKQRPEGANWGDFGDDDQLGRLNLITADRVLAAAREIRSGKTFCLSLPLDLPGGNVLNPRRHPPVLRPTFRDDVAYV NFPLAKVDPNALDVLSDDQVLLSMQYSTQWDSLAHVGALFDADGDGVAERVYYNGFRPNTDIVGPVDYAEDDHFSAHPCG HDHSHADALGIETFAAHGIQARGVLVDLAAHYGRECRTVGYDDLMRVIEADGIVVEPGDILVLRTGFAEMVMEMAGQPDA EVLHHSCCALDGRDERLLQWITDSGIAAIAADNYAVERYPARPAPEGAGPVPMLPLHHHCLFKLGLPLGELWYLRDLAAW LRAEGRHHFFLSAPPLRLPGAMGSPVTPVATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38599; Mature: 38599
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWKQRPEGANWGDFGDDDQLGRLNLITADRVLAAAREIRSGKTFCLSLPLDLPGGNVL CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECEECCCCCCC NPRRHPPVLRPTFRDDVAYVNFPLAKVDPNALDVLSDDQVLLSMQYSTQWDSLAHVGALF CCCCCCCCCCCCCCCCEEEEECCHHCCCCCHHEECCCCEEEEEEECCCCHHHHHHHHHEE DADGDGVAERVYYNGFRPNTDIVGPVDYAEDDHFSAHPCGHDHSHADALGIETFAAHGIQ CCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC ARGVLVDLAAHYGRECRTVGYDDLMRVIEADGIVVEPGDILVLRTGFAEMVMEMAGQPDA CCHHEEEHHHHCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECCHHHHHHHHHCCCHH EVLHHSCCALDGRDERLLQWITDSGIAAIAADNYAVERYPARPAPEGAGPVPMLPLHHHC HHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHH LFKLGLPLGELWYLRDLAAWLRAEGRHHFFLSAPPLRLPGAMGSPVTPVATV HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRWKQRPEGANWGDFGDDDQLGRLNLITADRVLAAAREIRSGKTFCLSLPLDLPGGNVL CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECEECCCCCCC NPRRHPPVLRPTFRDDVAYVNFPLAKVDPNALDVLSDDQVLLSMQYSTQWDSLAHVGALF CCCCCCCCCCCCCCCCEEEEECCHHCCCCCHHEECCCCEEEEEEECCCCHHHHHHHHHEE DADGDGVAERVYYNGFRPNTDIVGPVDYAEDDHFSAHPCGHDHSHADALGIETFAAHGIQ CCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC ARGVLVDLAAHYGRECRTVGYDDLMRVIEADGIVVEPGDILVLRTGFAEMVMEMAGQPDA CCHHEEEHHHHCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECCHHHHHHHHHCCCHH EVLHHSCCALDGRDERLLQWITDSGIAAIAADNYAVERYPARPAPEGAGPVPMLPLHHHC HHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHH LFKLGLPLGELWYLRDLAAWLRAEGRHHFFLSAPPLRLPGAMGSPVTPVATV HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA