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The map label for this gene is rcsB [H]

Identifier: 94313549

GI number: 94313549

Start: 1256333

End: 1256983

Strand: Reverse

Name: rcsB [H]

Synonym: Rmet_4627

Alternate gene names: 94313549

Gene position: 1256983-1256333 (Counterclockwise)

Preceding gene: 94313552

Following gene: 94313548

Centisome position: 48.72

GC content: 62.83

Gene sequence:

>651_bases
ATGCCACCAGACACCATCTCCGTCGTGATCGCGGATGATCACCCGGCGATTCAGCTAGCCGTCAAATCCACCCTTACCGA
GATTCCGACCGTCCAGATTGCCGCGATGTGCGCGTCCGGCGGAGAGCTTTTCGCGGCTGTGGAAGCACATCGGCCCGATC
TCATTGTTACGGATTTCACAATGGGCCGTTCCGAAGGCAACGATGATGGCCTTCGCCTGATCCAGCGGCTGCGCCAGTCC
GGCCCCGACACGCCGATCGTCGTCTTCACCATGCTGACCAACGGCGGCCTGCTCACGCGCATACAGGAATCAGGCGTCGC
GGGCATCGTGGGCAAGGACGAGGAGCCGGCCATCCTGAGGCAGATCTGCATGGATGCGGTTTCCGGAAATGGGCTGCGCC
TGTCGCCAGGTATCTCGGCGAGGATGGCAAGTGCCGGCGCAATGGCCGGCGGCGGTATCAGCCCGCTCTCGCCCAAGGAA
ATCGAAGTGGTGCGGATGTTCGCCGCTGGCAGCCCACTGACCGAAATTGCCGGATACCTCCATCGCACGCTGGCCACGGT
GGCAACGCAGAAGCGTTCGGCCATGCGCAAGCTGAACATCACCAGTAACGCCGACCTCGTCACGTACGCGCGCGACAACG
GCCTGACATGA

Upstream 100 bases:

>100_bases
CCCCATGTGGGCGAGGTGCCGAACCGGACCGCGCTCCCGCATGTTGTAGACGCAGAAACCCTCCCGGATCTTGTCCGGGG
TGCGGAAAAACCCAACGTAC

Downstream 100 bases:

>100_bases
CACCGGACACCGTCGAGCCGAACCGGAACCCGGACGCAGACTCGACCCGGCCTGCGCCGCCAGACCTCCGCGCCGTCAAA
CGCAATCTCCAGCGGGAACG

Product: LuxR family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPPDTISVVIADDHPAIQLAVKSTLTEIPTVQIAAMCASGGELFAAVEAHRPDLIVTDFTMGRSEGNDDGLRLIQRLRQS
GPDTPIVVFTMLTNGGLLTRIQESGVAGIVGKDEEPAILRQICMDAVSGNGLRLSPGISARMASAGAMAGGGISPLSPKE
IEVVRMFAAGSPLTEIAGYLHRTLATVATQKRSAMRKLNITSNADLVTYARDNGLT

Sequences:

>Translated_216_residues
MPPDTISVVIADDHPAIQLAVKSTLTEIPTVQIAAMCASGGELFAAVEAHRPDLIVTDFTMGRSEGNDDGLRLIQRLRQS
GPDTPIVVFTMLTNGGLLTRIQESGVAGIVGKDEEPAILRQICMDAVSGNGLRLSPGISARMASAGAMAGGGISPLSPKE
IEVVRMFAAGSPLTEIAGYLHRTLATVATQKRSAMRKLNITSNADLVTYARDNGLT
>Mature_215_residues
PPDTISVVIADDHPAIQLAVKSTLTEIPTVQIAAMCASGGELFAAVEAHRPDLIVTDFTMGRSEGNDDGLRLIQRLRQSG
PDTPIVVFTMLTNGGLLTRIQESGVAGIVGKDEEPAILRQICMDAVSGNGLRLSPGISARMASAGAMAGGGISPLSPKEI
EVVRMFAAGSPLTEIAGYLHRTLATVATQKRSAMRKLNITSNADLVTYARDNGLT

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=207, Percent_Identity=31.8840579710145, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788222, Length=213, Percent_Identity=23.0046948356808, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788712, Length=210, Percent_Identity=24.7619047619048, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22652; Mature: 22521

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDTISVVIADDHPAIQLAVKSTLTEIPTVQIAAMCASGGELFAAVEAHRPDLIVTDFT
CCCCEEEEEEECCCCEEEEEEHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEE
MGRSEGNDDGLRLIQRLRQSGPDTPIVVFTMLTNGGLLTRIQESGVAGIVGKDEEPAILR
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHH
QICMDAVSGNGLRLSPGISARMASAGAMAGGGISPLSPKEIEVVRMFAAGSPLTEIAGYL
HHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
HRTLATVATQKRSAMRKLNITSNADLVTYARDNGLT
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
PPDTISVVIADDHPAIQLAVKSTLTEIPTVQIAAMCASGGELFAAVEAHRPDLIVTDFT
CCCEEEEEEECCCCEEEEEEHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEE
MGRSEGNDDGLRLIQRLRQSGPDTPIVVFTMLTNGGLLTRIQESGVAGIVGKDEEPAILR
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHH
QICMDAVSGNGLRLSPGISARMASAGAMAGGGISPLSPKEIEVVRMFAAGSPLTEIAGYL
HHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
HRTLATVATQKRSAMRKLNITSNADLVTYARDNGLT
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]