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The map label for this gene is oruR [H]

Identifier: 94313429

GI number: 94313429

Start: 1105869

End: 1107071

Strand: Direct

Name: oruR [H]

Synonym: Rmet_4504

Alternate gene names: 94313429

Gene position: 1105869-1107071 (Clockwise)

Preceding gene: 291481530

Following gene: 94313431

Centisome position: 42.86

GC content: 66.42

Gene sequence:

>1203_bases
ATGCACATCGTTGCCACTCCCGCTCACCGGCACCCCGTGCCGGGCAAGCAGCGCAGCACCGTTGTACCGGGTCCGGCATT
GGCTGGCACTACTGGCACTACCGGCACTACCGGCACCATCATCGCCCCGCTTGCGGCAACGGCAACGCCAGCCCGCCATA
CCATCGCCATCCATCATGTCGACCAGATCCTGCTCGGGGTGCGCCGACTGGGATTCGACATCGATGCCCTGCTGCGGCGC
GCCGCGATCTCTCCGGCGCTGCTGGCGTCGCCGAACGCGCGCGTGACCCAGGACCAGTACGCCGCGCTGATCCGTACGCT
GCGCCGCACCACGCGCGACGAACTGTGGGGCCTGCTTAGCCGCCCCGTGCCTCCCGGCGTCTTCGCCCAGGCGGCCGGCG
CAATGATCCATAGCGCCACCCTGGAAGAAGCCATCCAGGCCGGGTTGCGCCAATACCGGCTGCATATCGACGAATTCACG
CCACGGCTGCACCTCAGCCCCGATGGCAAGACCGCTTCCCTGATATTGCACGGGCATGCGCCGGCCTCGCCGTGCCAGAT
CTTCGCCAAGTCGACCTTCGCGTTCCATGCTTACGGCCTGATCAACTGGCTGGTGGCACGGCGTGTACCCCTGTCGCGCG
TCGATCTGGGTTCGGGCCCGCCCCAGGCGCTGACCGACACCGAGCGCATCTTCAATACGACGGTCCGATACGGGCAGTCC
TGCACGGCCCTGCACTTCGATGCCGCCTGGCTGCGGCTGCCAGTGATGCAGGATCCCGCTGGCCTGCGCGAATTCCTGCT
TGAGACCCCGCACAAGCTGCTGGTGCGTTATCGCGACAATAGCTGCCTGGCGGAACGCATCCGGCTGCACCTGCGCTCCC
ACCTGGATGACGAGCTGCCGTCGCTGGAGCAGATGGCGCAGATGCTGCGCCTGACACCGCAAACCCTGAGCCGTCGCTTG
CGCGATGAAGGCCGCGGTTACCAGAACATCAAGGACAACCTGCGCCGCGACGCGGCGATCGGCATGCTCGAGCACTCATG
CCTGTCGCTGCAACAGGTGGCGCTGAGGCTGGGCTTTTCCGAGCTGAGCACCTTCCACCGCGCATTCAAGAAATGGACCG
GCGTCGCGCCCGGCGAGTACCGGCAGCGCGGCATGCAACCTATCTCGCCCATCGAGGACGATAGCCCTCGGCAAAGTGCC
TGA

Upstream 100 bases:

>100_bases
TGTGTGGCGCGAACCGGGCGCGGTAAGGTCCGCATCAGCCCGGCATGCCGCCATTGCGCGCGGCAGGGTTCCGGAGCTGC
CCTACACGACGAGGAGACTC

Downstream 100 bases:

>100_bases
TTTCCTTGCTGAACTCGGCACAGACATGCGTCATCAGGTCCATCGAGCGATAGACCAGGTAGACGTTGAAGTCCGGCAGT
TCGTCTTCCATCGCTAGCAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MHIVATPAHRHPVPGKQRSTVVPGPALAGTTGTTGTTGTIIAPLAATATPARHTIAIHHVDQILLGVRRLGFDIDALLRR
AAISPALLASPNARVTQDQYAALIRTLRRTTRDELWGLLSRPVPPGVFAQAAGAMIHSATLEEAIQAGLRQYRLHIDEFT
PRLHLSPDGKTASLILHGHAPASPCQIFAKSTFAFHAYGLINWLVARRVPLSRVDLGSGPPQALTDTERIFNTTVRYGQS
CTALHFDAAWLRLPVMQDPAGLREFLLETPHKLLVRYRDNSCLAERIRLHLRSHLDDELPSLEQMAQMLRLTPQTLSRRL
RDEGRGYQNIKDNLRRDAAIGMLEHSCLSLQQVALRLGFSELSTFHRAFKKWTGVAPGEYRQRGMQPISPIEDDSPRQSA

Sequences:

>Translated_400_residues
MHIVATPAHRHPVPGKQRSTVVPGPALAGTTGTTGTTGTIIAPLAATATPARHTIAIHHVDQILLGVRRLGFDIDALLRR
AAISPALLASPNARVTQDQYAALIRTLRRTTRDELWGLLSRPVPPGVFAQAAGAMIHSATLEEAIQAGLRQYRLHIDEFT
PRLHLSPDGKTASLILHGHAPASPCQIFAKSTFAFHAYGLINWLVARRVPLSRVDLGSGPPQALTDTERIFNTTVRYGQS
CTALHFDAAWLRLPVMQDPAGLREFLLETPHKLLVRYRDNSCLAERIRLHLRSHLDDELPSLEQMAQMLRLTPQTLSRRL
RDEGRGYQNIKDNLRRDAAIGMLEHSCLSLQQVALRLGFSELSTFHRAFKKWTGVAPGEYRQRGMQPISPIEDDSPRQSA
>Mature_400_residues
MHIVATPAHRHPVPGKQRSTVVPGPALAGTTGTTGTTGTIIAPLAATATPARHTIAIHHVDQILLGVRRLGFDIDALLRR
AAISPALLASPNARVTQDQYAALIRTLRRTTRDELWGLLSRPVPPGVFAQAAGAMIHSATLEEAIQAGLRQYRLHIDEFT
PRLHLSPDGKTASLILHGHAPASPCQIFAKSTFAFHAYGLINWLVARRVPLSRVDLGSGPPQALTDTERIFNTTVRYGQS
CTALHFDAAWLRLPVMQDPAGLREFLLETPHKLLVRYRDNSCLAERIRLHLRSHLDDELPSLEQMAQMLRLTPQTLSRRL
RDEGRGYQNIKDNLRRDAAIGMLEHSCLSLQQVALRLGFSELSTFHRAFKKWTGVAPGEYRQRGMQPISPIEDDSPRQSA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 44257; Mature: 44257

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIVATPAHRHPVPGKQRSTVVPGPALAGTTGTTGTTGTIIAPLAATATPARHTIAIHHV
CCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEHHHHHCCCCCHHEEHHHHH
DQILLGVRRLGFDIDALLRRAAISPALLASPNARVTQDQYAALIRTLRRTTRDELWGLLS
HHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RPVPPGVFAQAAGAMIHSATLEEAIQAGLRQYRLHIDEFTPRLHLSPDGKTASLILHGHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC
PASPCQIFAKSTFAFHAYGLINWLVARRVPLSRVDLGSGPPQALTDTERIFNTTVRYGQS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
CTALHFDAAWLRLPVMQDPAGLREFLLETPHKLLVRYRDNSCLAERIRLHLRSHLDDELP
CEEEEECHHHHCCCCCCCCHHHHHHHHHCHHHHHEEECCCHHHHHHHHHHHHHHCCCCCC
SLEQMAQMLRLTPQTLSRRLRDEGRGYQNIKDNLRRDAAIGMLEHSCLSLQQVALRLGFS
CHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
ELSTFHRAFKKWTGVAPGEYRQRGMQPISPIEDDSPRQSA
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIVATPAHRHPVPGKQRSTVVPGPALAGTTGTTGTTGTIIAPLAATATPARHTIAIHHV
CCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEHHHHHCCCCCHHEEHHHHH
DQILLGVRRLGFDIDALLRRAAISPALLASPNARVTQDQYAALIRTLRRTTRDELWGLLS
HHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RPVPPGVFAQAAGAMIHSATLEEAIQAGLRQYRLHIDEFTPRLHLSPDGKTASLILHGHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC
PASPCQIFAKSTFAFHAYGLINWLVARRVPLSRVDLGSGPPQALTDTERIFNTTVRYGQS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
CTALHFDAAWLRLPVMQDPAGLREFLLETPHKLLVRYRDNSCLAERIRLHLRSHLDDELP
CEEEEECHHHHCCCCCCCCHHHHHHHHHCHHHHHEEECCCHHHHHHHHHHHHHHCCCCCC
SLEQMAQMLRLTPQTLSRRLRDEGRGYQNIKDNLRRDAAIGMLEHSCLSLQQVALRLGFS
CHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
ELSTFHRAFKKWTGVAPGEYRQRGMQPISPIEDDSPRQSA
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]