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The map label for this gene is mmgC [H]

Identifier: 94313352

GI number: 94313352

Start: 1021466

End: 1022632

Strand: Reverse

Name: mmgC [H]

Synonym: Rmet_4427

Alternate gene names: 94313352

Gene position: 1022632-1021466 (Counterclockwise)

Preceding gene: 94313357

Following gene: 94313350

Centisome position: 39.64

GC content: 64.87

Gene sequence:

>1167_bases
ATGCAAAAACTGACCGAAGAGCGGCGCATGATTCAGGAGGCAGCGCGCCAGTTCACGATGGAGCGCGTGCTGCCGATCGC
CAACAGGCTGGACCCTGAAAAAGGCCAGATCCCGCGCGACCTGATCGACGAAATGGCCGAGCTTGGCTACTTCGGCATCC
TGATCCCCGAGGAGTACGGTGGCCTTGGGCTGGGCGCCTACGAGTACTGCCTCGTGGCCGAGCAGCTTTCGCGTGGCTGG
ATGAGCGTGGGCAGCCTGATTGCCCGCGGCAATGGCCTGATCGGCGCGCTGAAGGGCCTGGCGCCCGAGAAGAAGGCCGA
GTACCTGCCGCGCATGGCGCGTGGCGAATTCCTGGGTGCGTTCTCGCTGTCCGAGCCGAATGCCGGATCGGACGTGGCCA
ACATCTCCTGCCGCGCCGTGCGCGATGGCGACGACTGGCTCATCACCGGCAACAAGTACTGGTGCACGTTCGCCGACCAG
TCCGACTTCATCCTGGTGATCTGCCGCACCGATCCTGTGATCGACCCGAAGGCGCGCCACAAGGGCTTATCCGCATTCCT
GGTGGAAAAGCCGCGCGGCGAGCTGCCCGAAGGCGTGAAAGGCAGCGTCATCCCGAAAATCGGCTACCACGGCTGGACCA
CCTGGGAACTGGCGTTCGACAACTGCCGCGTGCCGCACTCGAGCATGGTGGGCGAGGAAGGCAAAGCGTTCTACTTGACC
ACCGCCGGACTGGAAACGGCGCGCGCCCACACGGCGGCCCGCTCGATCGGGCTAGCCCAGGGCAGCCTCGAGGATTCGAT
CCAGTACGCGAAGGACCGCGCCCAGTTCGGCGCCCCGATCGGCAACTTCCAGGCCATCCGCTTCAAGCTGGCCGACATGG
CGACGCAGATCGAAGCATCCCGCGCCCTGCTCTACACCGTGTGCGAAAAGATCGACGAAGGCGTGCGCGCCGACACCGAG
GCGTCGATGGTCAAGCTGTTCGCCAGCGAGATGTGCGAGCGCGTGACCAGCGAAGGGCTGCAGATCCATGGCGGCGCCGG
CTACACCACGCACTTCGCGGCCGAGCGCTACTGGCGCGATGCGCGTCTGACCAAGATTTTCGAAGGCACCTCCGAGATCC
AGATGCGCATCATCTCCGATGCCATGCTGGGCAAGGTTGCAGCCTGA

Upstream 100 bases:

>100_bases
CTCCGTAGCAACCTCAACAGTTTCGCTTGCAAAAGTCCGGATACCCTGATTACTATGTCCGTACATATAAGCGAACCAAT
GAGAAAGTGAGGAGTCGTCG

Downstream 100 bases:

>100_bases
TCTCCGGGGCAAGCGATGACTTCGAACATGCCTGCCACCGGCATTACCGCCCGCGCCGCCAGCATCGCGGTTGACCGAGC
CCTGCGCTTTCCGGCCGCCG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQKLTEERRMIQEAARQFTMERVLPIANRLDPEKGQIPRDLIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGW
MSVGSLIARGNGLIGALKGLAPEKKAEYLPRMARGEFLGAFSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADQ
SDFILVICRTDPVIDPKARHKGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLT
TAGLETARAHTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEASRALLYTVCEKIDEGVRADTE
ASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQMRIISDAMLGKVAA

Sequences:

>Translated_388_residues
MQKLTEERRMIQEAARQFTMERVLPIANRLDPEKGQIPRDLIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGW
MSVGSLIARGNGLIGALKGLAPEKKAEYLPRMARGEFLGAFSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADQ
SDFILVICRTDPVIDPKARHKGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLT
TAGLETARAHTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEASRALLYTVCEKIDEGVRADTE
ASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQMRIISDAMLGKVAA
>Mature_388_residues
MQKLTEERRMIQEAARQFTMERVLPIANRLDPEKGQIPRDLIDEMAELGYFGILIPEEYGGLGLGAYEYCLVAEQLSRGW
MSVGSLIARGNGLIGALKGLAPEKKAEYLPRMARGEFLGAFSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADQ
SDFILVICRTDPVIDPKARHKGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLT
TAGLETARAHTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEASRALLYTVCEKIDEGVRADTE
ASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRDARLTKIFEGTSEIQMRIISDAMLGKVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=383, Percent_Identity=37.3368146214099, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226958412, Length=382, Percent_Identity=35.8638743455497, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI226958414, Length=362, Percent_Identity=35.6353591160221, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI4501859, Length=381, Percent_Identity=34.3832020997375, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI4557231, Length=386, Percent_Identity=33.419689119171, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI187960098, Length=386, Percent_Identity=33.419689119171, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI21361497, Length=376, Percent_Identity=33.2446808510638, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=31.8537859007833, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI76496475, Length=380, Percent_Identity=33.1578947368421, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=33.1578947368421, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=30.4232804232804, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI4503943, Length=406, Percent_Identity=28.8177339901478, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI7669494, Length=390, Percent_Identity=28.4615384615385, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI38505218, Length=396, Percent_Identity=24.7474747474747, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI48976061, Length=398, Percent_Identity=25.1256281407035, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI211971008, Length=398, Percent_Identity=25.1256281407035, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=30.9711286089239, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1786223, Length=346, Percent_Identity=27.1676300578035, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI87082384, Length=288, Percent_Identity=27.4305555555556, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=34.8051948051948, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17569725, Length=392, Percent_Identity=32.3979591836735, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=34.8167539267016, Blast_Score=224, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17570075, Length=387, Percent_Identity=32.5581395348837, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17534899, Length=388, Percent_Identity=31.701030927835, Blast_Score=217, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI17506239, Length=378, Percent_Identity=33.0687830687831, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17533517, Length=380, Percent_Identity=33.4210526315789, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI71985184, Length=364, Percent_Identity=31.043956043956, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71990804, Length=295, Percent_Identity=36.9491525423729, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17505929, Length=380, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=31.0344827586207, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI71985192, Length=306, Percent_Identity=30.0653594771242, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71982178, Length=286, Percent_Identity=29.3706293706294, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=33.7552742616034, Blast_Score=130, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI17534353, Length=399, Percent_Identity=26.8170426065163, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17531909, Length=242, Percent_Identity=29.3388429752066, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=368, Percent_Identity=26.3586956521739, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17531913, Length=173, Percent_Identity=30.635838150289, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI86563381, Length=269, Percent_Identity=26.7657992565056, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=269, Percent_Identity=26.7657992565056, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21356377, Length=390, Percent_Identity=36.1538461538462, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24660351, Length=381, Percent_Identity=36.2204724409449, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI24666513, Length=387, Percent_Identity=32.2997416020672, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=34.6456692913386, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=34.1207349081365, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI281363737, Length=334, Percent_Identity=33.5329341317365, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI19920834, Length=396, Percent_Identity=28.2828282828283, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42736; Mature: 42736

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLTEERRMIQEAARQFTMERVLPIANRLDPEKGQIPRDLIDEMAELGYFGILIPEEYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCC
GLGLGAYEYCLVAEQLSRGWMSVGSLIARGNGLIGALKGLAPEKKAEYLPRMARGEFLGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCHHHCCCEEEE
FSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADQSDFILVICRTDPVIDPKARH
EECCCCCCCCCCCCEEEEEEECCCCEEEECCEEEEEECCCCCEEEEEECCCCCCCCHHHH
KGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLT
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCEEEEE
TAGLETARAHTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEAS
ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RALLYTVCEKIDEGVRADTEASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH
ARLTKIFEGTSEIQMRIISDAMLGKVAA
HHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKLTEERRMIQEAARQFTMERVLPIANRLDPEKGQIPRDLIDEMAELGYFGILIPEEYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCC
GLGLGAYEYCLVAEQLSRGWMSVGSLIARGNGLIGALKGLAPEKKAEYLPRMARGEFLGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCHHHCCCEEEE
FSLSEPNAGSDVANISCRAVRDGDDWLITGNKYWCTFADQSDFILVICRTDPVIDPKARH
EECCCCCCCCCCCCEEEEEEECCCCEEEECCEEEEEECCCCCEEEEEECCCCCCCCHHHH
KGLSAFLVEKPRGELPEGVKGSVIPKIGYHGWTTWELAFDNCRVPHSSMVGEEGKAFYLT
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCEEEEE
TAGLETARAHTAARSIGLAQGSLEDSIQYAKDRAQFGAPIGNFQAIRFKLADMATQIEAS
ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RALLYTVCEKIDEGVRADTEASMVKLFASEMCERVTSEGLQIHGGAGYTTHFAAERYWRD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH
ARLTKIFEGTSEIQMRIISDAMLGKVAA
HHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]