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The map label for this gene is phnF [C]

Identifier: 94313341

GI number: 94313341

Start: 1012362

End: 1013138

Strand: Direct

Name: phnF [C]

Synonym: Rmet_4416

Alternate gene names: 94313341

Gene position: 1012362-1013138 (Clockwise)

Preceding gene: 291481529

Following gene: 94313353

Centisome position: 39.24

GC content: 66.41

Gene sequence:

>777_bases
ATGGCAACCGCCCAGAAGGACAGCAAGACCGAGTCACCCGCCCCCACGCGCTACGCCGAACTGGCGAGCACGCTGATTCG
CGAGATATCCGAAGGCCGCCATGTGGTGGGCAGTCTGTTGCCGACCGAGCATGAACTGGCCGAGTTGCATGGCGTCAGCC
GCCATACGGTGCGGGCGTCGCTGCGGATGCTGCAGGATCTCGGCTATATCTCGCGCAAGAAAGCGGTGGGGACCATTGTC
GAGTCCGCCAACCCGGGAGCGTCGTATACGCAGTCGTTCGGGACGGCCGAGGATCTGGTGCGTGTGGCCGCCACCGAAGT
GCGGGCGATCGAGGCGGTGCGCGATGTCACGCTGGACCGCGCGCTGGCGCGGCGGCTCGAAGCGCCGATCGGCAGCGCAT
GGGTGCTGCTGTCCGGCACGCGCGTGGATGCGCGCAAAGGCCAGACGCCGGTTGCGGTCGCGGATATCTATATCGAGGCC
ACGCTGGCGGGGCTGGTCGACACGATTCGGAATAGCCCCCAGGTGCTGGTCAGCGCGCTGATCGAGCGCGAGTATGCGAT
CGCGATTGCCGAGATCCGGCAAACGATCACCGCCACGCTGATCGAGGGCCCCCTGGCCGATCAACTCGGTGTGGAGGCTG
GCACGGCGGGTATGCGGCTGGTGCGTCAGTACAAGGATTCGGCCGGCCGGATTTTGGAGATCACCGATACGGTGTATCCG
GCCGATCGGGTGTCGGTGTCGTTTCAGCTCAGGCGCGGCAGGCACGCTGGCGCGTGA

Upstream 100 bases:

>100_bases
CCGCGCGGCAAGACGTTGGCCGGACGCGGCCGGCATTCGCAGCCAACACCCGTGCCAGGCCGTACAATGCGGCGGCATCC
AGATCCAGACATCCATCGCA

Downstream 100 bases:

>100_bases
CTTGCCACCGCTGTCCTGCGTGACGGCGGATGCAGCCCCGTCAATCCACCTTGACGTTGGCAGCCTTGACCGCGTCGCCC
CAGCGCGTGACTTCGGCGCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR Family Regulatory Protein; GntR-Family Transcriptional Regulator; Regulatory Protein GntR HTH; Gntr Family Transcriptional Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator GntR UbiC Families; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MATAQKDSKTESPAPTRYAELASTLIREISEGRHVVGSLLPTEHELAELHGVSRHTVRASLRMLQDLGYISRKKAVGTIV
ESANPGASYTQSFGTAEDLVRVAATEVRAIEAVRDVTLDRALARRLEAPIGSAWVLLSGTRVDARKGQTPVAVADIYIEA
TLAGLVDTIRNSPQVLVSALIEREYAIAIAEIRQTITATLIEGPLADQLGVEAGTAGMRLVRQYKDSAGRILEITDTVYP
ADRVSVSFQLRRGRHAGA

Sequences:

>Translated_258_residues
MATAQKDSKTESPAPTRYAELASTLIREISEGRHVVGSLLPTEHELAELHGVSRHTVRASLRMLQDLGYISRKKAVGTIV
ESANPGASYTQSFGTAEDLVRVAATEVRAIEAVRDVTLDRALARRLEAPIGSAWVLLSGTRVDARKGQTPVAVADIYIEA
TLAGLVDTIRNSPQVLVSALIEREYAIAIAEIRQTITATLIEGPLADQLGVEAGTAGMRLVRQYKDSAGRILEITDTVYP
ADRVSVSFQLRRGRHAGA
>Mature_257_residues
ATAQKDSKTESPAPTRYAELASTLIREISEGRHVVGSLLPTEHELAELHGVSRHTVRASLRMLQDLGYISRKKAVGTIVE
SANPGASYTQSFGTAEDLVRVAATEVRAIEAVRDVTLDRALARRLEAPIGSAWVLLSGTRVDARKGQTPVAVADIYIEAT
LAGLVDTIRNSPQVLVSALIEREYAIAIAEIRQTITATLIEGPLADQLGVEAGTAGMRLVRQYKDSAGRILEITDTVYPA
DRVSVSFQLRRGRHAGA

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. By Similarity Could Be A Transcriptional Regulator. [C]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27793; Mature: 27662

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAQKDSKTESPAPTRYAELASTLIREISEGRHVVGSLLPTEHELAELHGVSRHTVRAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCHHHHHHHH
LRMLQDLGYISRKKAVGTIVESANPGASYTQSFGTAEDLVRVAATEVRAIEAVRDVTLDR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALARRLEAPIGSAWVLLSGTRVDARKGQTPVAVADIYIEATLAGLVDTIRNSPQVLVSAL
HHHHHHCCCCCCEEEEEECCEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IEREYAIAIAEIRQTITATLIEGPLADQLGVEAGTAGMRLVRQYKDSAGRILEITDTVYP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
ADRVSVSFQLRRGRHAGA
CHHHEEEEEECCCCCCCC
>Mature Secondary Structure 
ATAQKDSKTESPAPTRYAELASTLIREISEGRHVVGSLLPTEHELAELHGVSRHTVRAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCHHHHHHHH
LRMLQDLGYISRKKAVGTIVESANPGASYTQSFGTAEDLVRVAATEVRAIEAVRDVTLDR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALARRLEAPIGSAWVLLSGTRVDARKGQTPVAVADIYIEATLAGLVDTIRNSPQVLVSAL
HHHHHHCCCCCCEEEEEECCEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IEREYAIAIAEIRQTITATLIEGPLADQLGVEAGTAGMRLVRQYKDSAGRILEITDTVYP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
ADRVSVSFQLRRGRHAGA
CHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA