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The map label for this gene is ybfF [C]

Identifier: 94313307

GI number: 94313307

Start: 979754

End: 980506

Strand: Direct

Name: ybfF [C]

Synonym: Rmet_4382

Alternate gene names: 94313307

Gene position: 979754-980506 (Clockwise)

Preceding gene: 94313306

Following gene: 94313308

Centisome position: 37.97

GC content: 64.67

Gene sequence:

>753_bases
ATGACCGCCGTTTTTCGTCCCATCGTGCTGGTTCCGGTCTTTGACCACGAACATGCCATCGGAGCCATGGTCGAGGCCAT
CCTGAGGCATCCGTGGCCTTGCCTGCTGGTCGATGACGGCAGCGGCCCGGCGTGCAGCCAGGTGCTGCGCGACCTTGCCG
ATGCCCATGGGGAGCGCGTGATCCTGATCCGCCTGCCGCAAAACCGGGGCAAGGGCGCGGCGATGATGGCCGGGTTCCAG
GAGGCCGCGAAGCTCGGCTATACGCACGCGCTGCAGATCGATGCCGACGGGCAGCACAATGCCGACGACATCGCGCGTTT
CTTCACGCTGGCACGCGAGAACCCGACGGCGGTCATCGCGGGCTGCCCGGTGTATGACCAGACGGTGCCGCGCCACCGCT
TCTATTTCCGGTATCTCACGCACATCCTGGTGTGGATCAACACGCTCTCGTTCGAGATCCGCGACTCGATGTGCGGCTTG
CGCGTCTATCCGCTCGACGCGGTGACAGCGCTGATGCAGGACGTGCGGCTCGGCCACCACATGGAGTTCGACACCGAGGT
GATCGTGCGCCTGTACTGGCGCGGCGTGCCGGTCGTCAACGTTCCGACGCGGGTCACGTATCCCAGCGATGGCGTCTCGC
ATTTCCGTCTTATCCAGGACAACCTGCTGATGACGGGGATGCTGACCCGCCTGTTCTTCGGCATGTTGTGGCGAATGCCG
CGTCTGTTGTGGCGCAAGGTGCGCCCCGCATGA

Upstream 100 bases:

>100_bases
CGCTCGACTGGCAGCCGGCGTCATGCACGCTGGCCTTTCGACTAACCTCCGATGCCGGCTCGCACGCGAGCGGCAAGATC
GTTTTTCACCCCGCAGTTTC

Downstream 100 bases:

>100_bases
GCACCTTGCACCCCGAAACACAGGGCGCCGCGCCGCGCCGCCGCACGCCGCACTGGAGCGCCATTGGCGAAGCCACCTGC
GTCTGGGGCATCTGGTTACT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTAVFRPIVLVPVFDHEHAIGAMVEAILRHPWPCLLVDDGSGPACSQVLRDLADAHGERVILIRLPQNRGKGAAMMAGFQ
EAAKLGYTHALQIDADGQHNADDIARFFTLARENPTAVIAGCPVYDQTVPRHRFYFRYLTHILVWINTLSFEIRDSMCGL
RVYPLDAVTALMQDVRLGHHMEFDTEVIVRLYWRGVPVVNVPTRVTYPSDGVSHFRLIQDNLLMTGMLTRLFFGMLWRMP
RLLWRKVRPA

Sequences:

>Translated_250_residues
MTAVFRPIVLVPVFDHEHAIGAMVEAILRHPWPCLLVDDGSGPACSQVLRDLADAHGERVILIRLPQNRGKGAAMMAGFQ
EAAKLGYTHALQIDADGQHNADDIARFFTLARENPTAVIAGCPVYDQTVPRHRFYFRYLTHILVWINTLSFEIRDSMCGL
RVYPLDAVTALMQDVRLGHHMEFDTEVIVRLYWRGVPVVNVPTRVTYPSDGVSHFRLIQDNLLMTGMLTRLFFGMLWRMP
RLLWRKVRPA
>Mature_249_residues
TAVFRPIVLVPVFDHEHAIGAMVEAILRHPWPCLLVDDGSGPACSQVLRDLADAHGERVILIRLPQNRGKGAAMMAGFQE
AAKLGYTHALQIDADGQHNADDIARFFTLARENPTAVIAGCPVYDQTVPRHRFYFRYLTHILVWINTLSFEIRDSMCGLR
VYPLDAVTALMQDVRLGHHMEFDTEVIVRLYWRGVPVVNVPTRVTYPSDGVSHFRLIQDNLLMTGMLTRLFFGMLWRMPR
LLWRKVRPA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28459; Mature: 28327

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVFRPIVLVPVFDHEHAIGAMVEAILRHPWPCLLVDDGSGPACSQVLRDLADAHGERV
CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEE
ILIRLPQNRGKGAAMMAGFQEAAKLGYTHALQIDADGQHNADDIARFFTLARENPTAVIA
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
GCPVYDQTVPRHRFYFRYLTHILVWINTLSFEIRDSMCGLRVYPLDAVTALMQDVRLGHH
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEEECHHHHHHHHHHHHHCCC
MEFDTEVIVRLYWRGVPVVNVPTRVTYPSDGVSHFRLIQDNLLMTGMLTRLFFGMLWRMP
CCCCHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLWRKVRPA
HHHHHHCCCC
>Mature Secondary Structure 
TAVFRPIVLVPVFDHEHAIGAMVEAILRHPWPCLLVDDGSGPACSQVLRDLADAHGERV
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEE
ILIRLPQNRGKGAAMMAGFQEAAKLGYTHALQIDADGQHNADDIARFFTLARENPTAVIA
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
GCPVYDQTVPRHRFYFRYLTHILVWINTLSFEIRDSMCGLRVYPLDAVTALMQDVRLGHH
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEEECHHHHHHHHHHHHHCCC
MEFDTEVIVRLYWRGVPVVNVPTRVTYPSDGVSHFRLIQDNLLMTGMLTRLFFGMLWRMP
CCCCHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLWRKVRPA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]