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The map label for this gene is 94313272

Identifier: 94313272

GI number: 94313272

Start: 944169

End: 944678

Strand: Reverse

Name: 94313272

Synonym: Rmet_4347

Alternate gene names: NA

Gene position: 944678-944169 (Counterclockwise)

Preceding gene: 94313277

Following gene: 94313268

Centisome position: 36.61

GC content: 57.06

Gene sequence:

>510_bases
TTGGACTGGAAGCCACTCGGCGGCAGGCACTGCGGGGCGCAGACCGAGCCGATTGACAGTCCTGGCGCCTCAGTGTCACG
ATCAGTAGCCCTTCAATATTACTTGGGGAGGTCAGTCATGTCAGTCATGAGAACTCTACTGGCGAGCGCCGGTTTAGCAC
TGCTGTTGGCCCTGGCAACGGAACCAAGCGTCAGCGCTCAGGAGGCACCTGAATGGATGAAACAGACACTTCCCGAACAG
GCACTGAAGCCGCACTGGGACGAATCTCGGGCCGTGATGAATCCCACGGGAGCTTTAGATGCGAAAACCAAGCAACTCAT
TGCCCTCGGCGTGGCTGCACAAATTCCTTGTGCATATTGCGTTTCCGCTCACACTAAAGCGGCAAAAGCCGCTGGTGCGA
CCGATGCTCAAATAAAGGAGGCCATTGCAACCGCCGCGCTCGTCCGTTTCAACAGCACAATGTTGAATGGCTCAGACGGC
GGCACCGAGTGGTCGCCTCAACGTAAGTGA

Upstream 100 bases:

>100_bases
CTCCGCAATGGCGATGCTCGGCTTCGCCGACGCCCCGGTGGAGGCTGGGAACGTCGTCCGACTCGGTGCAGTGGCGTAAG
GTCGGCCCCCCAATTCGAAT

Downstream 100 bases:

>100_bases
TGATCGCGCCGGCCGCCGATTGACAATCCTCGCGTCGGCCAGGGCAACGCTGCCGCGGATTTCAGCGATAGGCGGTGACT
CCACGTCCGCGAAGTGTAAC

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDWKPLGGRHCGAQTEPIDSPGASVSRSVALQYYLGRSVMSVMRTLLASAGLALLLALATEPSVSAQEAPEWMKQTLPEQ
ALKPHWDESRAVMNPTGALDAKTKQLIALGVAAQIPCAYCVSAHTKAAKAAGATDAQIKEAIATAALVRFNSTMLNGSDG
GTEWSPQRK

Sequences:

>Translated_169_residues
MDWKPLGGRHCGAQTEPIDSPGASVSRSVALQYYLGRSVMSVMRTLLASAGLALLLALATEPSVSAQEAPEWMKQTLPEQ
ALKPHWDESRAVMNPTGALDAKTKQLIALGVAAQIPCAYCVSAHTKAAKAAGATDAQIKEAIATAALVRFNSTMLNGSDG
GTEWSPQRK
>Mature_169_residues
MDWKPLGGRHCGAQTEPIDSPGASVSRSVALQYYLGRSVMSVMRTLLASAGLALLLALATEPSVSAQEAPEWMKQTLPEQ
ALKPHWDESRAVMNPTGALDAKTKQLIALGVAAQIPCAYCVSAHTKAAKAAGATDAQIKEAIATAALVRFNSTMLNGSDG
GTEWSPQRK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17804; Mature: 17804

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWKPLGGRHCGAQTEPIDSPGASVSRSVALQYYLGRSVMSVMRTLLASAGLALLLALAT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPSVSAQEAPEWMKQTLPEQALKPHWDESRAVMNPTGALDAKTKQLIALGVAAQIPCAYC
CCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHH
VSAHTKAAKAAGATDAQIKEAIATAALVRFNSTMLNGSDGGTEWSPQRK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDWKPLGGRHCGAQTEPIDSPGASVSRSVALQYYLGRSVMSVMRTLLASAGLALLLALAT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPSVSAQEAPEWMKQTLPEQALKPHWDESRAVMNPTGALDAKTKQLIALGVAAQIPCAYC
CCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHH
VSAHTKAAKAAGATDAQIKEAIATAALVRFNSTMLNGSDGGTEWSPQRK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA