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The map label for this gene is 94313261

Identifier: 94313261

GI number: 94313261

Start: 929983

End: 931014

Strand: Reverse

Name: 94313261

Synonym: Rmet_4336

Alternate gene names: NA

Gene position: 931014-929983 (Counterclockwise)

Preceding gene: 94313266

Following gene: 94313260

Centisome position: 36.08

GC content: 60.76

Gene sequence:

>1032_bases
ATGTCCCTTGTCACGCCCGTGAGCACTGGCCCAGCCACCAAGACCATCGAAAGCGCACCAACGGGAAAGGCCAAAGTGCC
GGCAACCGACTACAGCACATCGCCAGCCCACTCGACGCGGCTGCCCACGCCGAAACGCTCGTCGCATGCCTGGGACCGCT
ATGAACTTCCCACCATTGCACTGGCCGCCGTACTTTATGCCGCGTGGGCCGCGTTGGTCTGGTGGCACGCAAGCATCCCC
GGGCCGCTGCTGTTCCTGGCGGGCGGCTATGTCGCGCAGCTCCATTTTTCCCTGCAGCACGAATCCATTCACGCCATGCG
GCACCTGCCGATCTGGTTGCGTACTGCCGTAGTCTGGCCACCCATCAACCTGTGGCTACCGTATCCGTTCTATAACAAGG
GACACAGCACGCACCACATCAATGTCCATCTCACCCATCCCCAGAAGGACACGGAAACCGCGTACCACAGCCCCACTCAA
TGGCAGGCAATGAGCGTCACATGGCGCGCGATCTATCGCGCCAATCAGATCCTGCCAGTGCGTTTGATATGCGGCCCCTT
CCTGCGTCTGGTACGGCTCGCGCGCAATGAGTATCGGTGCCTGATTGCAGGCGATTTCAGTCGTCTGAAGATCTGGGCGA
TACATGCGTTGTCCGCGACGCCCTTGCTGTACTTCGCGCTGGCGCTGGCCGGCATGCGCTGGTGGGAGTACCTGCTGTAC
TTCGTCTATCCCGGCATGATGCTCGGTCAGCTCCGGACGTTCACCGAGCATCGCTGGGGTGAACGTCCAGTGGAACGCAC
GGCTATCGTGGAATCCAACAGCATTGGTGGCCTGCTTTACCTCTACAACAACCTCCACTACGTGCATCACCTGTTTCCCA
CACTGCCCTGGTATCACATCCCCCGTTATTTCCGCGCGCATCGCGCCGCAGTACTACACGGCAATGGCGGCTTCTACTAC
CGTGGCTATGCTGAGATCGCCAGGCGCTTCTGGCGCACCTCAGTCTTCGACCCGGTCCATCCGCGCTGGTAG

Upstream 100 bases:

>100_bases
GGCCCAGCCTCCTACGATGACAACCATTTCTCCAGACACCGACCGCGCCCCGCCCTCTTCCGTTACATGGTGAGCGGCGG
AGTGTTACGAACTTGCCACC

Downstream 100 bases:

>100_bases
GCAACGTCGGACAGACGTCGTGCGCCAGTTTGCGCACTAACTAATGCCAAAAGCTTCATTCCCATGTCGGGATGTGTTGC
CTAGCATTGCTGGTTGCTGC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Beta-Carotene Ketolase

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSLVTPVSTGPATKTIESAPTGKAKVPATDYSTSPAHSTRLPTPKRSSHAWDRYELPTIALAAVLYAAWAALVWWHASIP
GPLLFLAGGYVAQLHFSLQHESIHAMRHLPIWLRTAVVWPPINLWLPYPFYNKGHSTHHINVHLTHPQKDTETAYHSPTQ
WQAMSVTWRAIYRANQILPVRLICGPFLRLVRLARNEYRCLIAGDFSRLKIWAIHALSATPLLYFALALAGMRWWEYLLY
FVYPGMMLGQLRTFTEHRWGERPVERTAIVESNSIGGLLYLYNNLHYVHHLFPTLPWYHIPRYFRAHRAAVLHGNGGFYY
RGYAEIARRFWRTSVFDPVHPRW

Sequences:

>Translated_343_residues
MSLVTPVSTGPATKTIESAPTGKAKVPATDYSTSPAHSTRLPTPKRSSHAWDRYELPTIALAAVLYAAWAALVWWHASIP
GPLLFLAGGYVAQLHFSLQHESIHAMRHLPIWLRTAVVWPPINLWLPYPFYNKGHSTHHINVHLTHPQKDTETAYHSPTQ
WQAMSVTWRAIYRANQILPVRLICGPFLRLVRLARNEYRCLIAGDFSRLKIWAIHALSATPLLYFALALAGMRWWEYLLY
FVYPGMMLGQLRTFTEHRWGERPVERTAIVESNSIGGLLYLYNNLHYVHHLFPTLPWYHIPRYFRAHRAAVLHGNGGFYY
RGYAEIARRFWRTSVFDPVHPRW
>Mature_342_residues
SLVTPVSTGPATKTIESAPTGKAKVPATDYSTSPAHSTRLPTPKRSSHAWDRYELPTIALAAVLYAAWAALVWWHASIPG
PLLFLAGGYVAQLHFSLQHESIHAMRHLPIWLRTAVVWPPINLWLPYPFYNKGHSTHHINVHLTHPQKDTETAYHSPTQW
QAMSVTWRAIYRANQILPVRLICGPFLRLVRLARNEYRCLIAGDFSRLKIWAIHALSATPLLYFALALAGMRWWEYLLYF
VYPGMMLGQLRTFTEHRWGERPVERTAIVESNSIGGLLYLYNNLHYVHHLFPTLPWYHIPRYFRAHRAAVLHGNGGFYYR
GYAEIARRFWRTSVFDPVHPRW

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39634; Mature: 39503

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVTPVSTGPATKTIESAPTGKAKVPATDYSTSPAHSTRLPTPKRSSHAWDRYELPTIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAAVLYAAWAALVWWHASIPGPLLFLAGGYVAQLHFSLQHESIHAMRHLPIWLRTAVVWP
HHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEHHHHHHHHHHHCCHHHHHEEECC
PINLWLPYPFYNKGHSTHHINVHLTHPQKDTETAYHSPTQWQAMSVTWRAIYRANQILPV
CCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEH
RLICGPFLRLVRLARNEYRCLIAGDFSRLKIWAIHALSATPLLYFALALAGMRWWEYLLY
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
FVYPGMMLGQLRTFTEHRWGERPVERTAIVESNSIGGLLYLYNNLHYVHHLFPTLPWYHI
HHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCEEEEEECCHHHHHHHHHCCCHHHH
PRYFRAHRAAVLHGNGGFYYRGYAEIARRFWRTSVFDPVHPRW
HHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLVTPVSTGPATKTIESAPTGKAKVPATDYSTSPAHSTRLPTPKRSSHAWDRYELPTIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAAVLYAAWAALVWWHASIPGPLLFLAGGYVAQLHFSLQHESIHAMRHLPIWLRTAVVWP
HHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEHHHHHHHHHHHCCHHHHHEEECC
PINLWLPYPFYNKGHSTHHINVHLTHPQKDTETAYHSPTQWQAMSVTWRAIYRANQILPV
CCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEH
RLICGPFLRLVRLARNEYRCLIAGDFSRLKIWAIHALSATPLLYFALALAGMRWWEYLLY
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
FVYPGMMLGQLRTFTEHRWGERPVERTAIVESNSIGGLLYLYNNLHYVHHLFPTLPWYHI
HHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCEEEEEECCHHHHHHHHHCCCHHHH
PRYFRAHRAAVLHGNGGFYYRGYAEIARRFWRTSVFDPVHPRW
HHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA