Click here to switch to the map view.

The map label for this gene is 94313228

Identifier: 94313228

GI number: 94313228

Start: 896761

End: 897399

Strand: Reverse

Name: 94313228

Synonym: Rmet_4302

Alternate gene names: NA

Gene position: 897399-896761 (Counterclockwise)

Preceding gene: 94313230

Following gene: 94313227

Centisome position: 34.78

GC content: 62.75

Gene sequence:

>639_bases
ATGATAAGTCTGAGCATCGAAGGAAAACAGGTCGAAGCGCCGCCAAACTGCTCCATCCTGCAGGCCTTCCTGCATGCAGG
GGAAACGTTGGTGGAGGGCGTTGGCTGCATGGGCCAGGGGGTATGCGGATCCTGCCGCGTCCTGGTCCGGCGGGCCGGCA
AGCAGGAAGTGATCACCGCACTCGCCTGCGAGACCTTGATCGAGGACGGGATGCAGGTTGCCTTTCTCGACTTCTTCACT
TCCCCGGCACGCCATGTCTATCGGCTGGAAGACATCGAGGATAGTTGGCAGGCGTTGCAGGCGATTTCTGACATATTCCC
GGAAGCAGCCGACTGCCGTCACTGCAGCGGGTGCGATCGCGCATGCCCGAAGGGACTCGATGTCCAGCGCGGCGTCAACC
TCGCCGTGGAGGGCAATCTTTCCGAGGCCGGCCACGTCTTCGACGAATGCGTCATGTGCAACCTCTGCACACTGGCCTGC
CCCGAGCTCATCCAGCCTAACCACCTCGGCCTGTTCGTGCGACGGATGATTGCGTCGCTGACGCTGCGGCCGGCGAATCT
GATGCGACGGCTGCGGGAGATCGAGCGTGGCGACATGACAATCGATCTCGACGCGCCGGGCGCCCAGCCACCACACTGA

Upstream 100 bases:

>100_bases
TCCCCCTTGCAATGACTTTCCATGTGCTATGTTTTATATGATCTTTTCGGCAAATGCGCCAGTGTGGCGCTAACGCCGCC
GGCCACCAGAGTGCGAGAAG

Downstream 100 bases:

>100_bases
CCGAGACACCCCTCATGCCTGCCGGCATCCCTTACGACGAGGCGCGCAAGCGCTACCGGCCCGGCACGGCGCCGGCGGTG
CGCAGTGACAACACCTCGGC

Product: ferredoxin

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MISLSIEGKQVEAPPNCSILQAFLHAGETLVEGVGCMGQGVCGSCRVLVRRAGKQEVITALACETLIEDGMQVAFLDFFT
SPARHVYRLEDIEDSWQALQAISDIFPEAADCRHCSGCDRACPKGLDVQRGVNLAVEGNLSEAGHVFDECVMCNLCTLAC
PELIQPNHLGLFVRRMIASLTLRPANLMRRLREIERGDMTIDLDAPGAQPPH

Sequences:

>Translated_212_residues
MISLSIEGKQVEAPPNCSILQAFLHAGETLVEGVGCMGQGVCGSCRVLVRRAGKQEVITALACETLIEDGMQVAFLDFFT
SPARHVYRLEDIEDSWQALQAISDIFPEAADCRHCSGCDRACPKGLDVQRGVNLAVEGNLSEAGHVFDECVMCNLCTLAC
PELIQPNHLGLFVRRMIASLTLRPANLMRRLREIERGDMTIDLDAPGAQPPH
>Mature_212_residues
MISLSIEGKQVEAPPNCSILQAFLHAGETLVEGVGCMGQGVCGSCRVLVRRAGKQEVITALACETLIEDGMQVAFLDFFT
SPARHVYRLEDIEDSWQALQAISDIFPEAADCRHCSGCDRACPKGLDVQRGVNLAVEGNLSEAGHVFDECVMCNLCTLAC
PELIQPNHLGLFVRRMIASLTLRPANLMRRLREIERGDMTIDLDAPGAQPPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23106; Mature: 23106

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLSIEGKQVEAPPNCSILQAFLHAGETLVEGVGCMGQGVCGSCRVLVRRAGKQEVITA
CEEECCCCCEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
LACETLIEDGMQVAFLDFFTSPARHVYRLEDIEDSWQALQAISDIFPEAADCRHCSGCDR
HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ACPKGLDVQRGVNLAVEGNLSEAGHVFDECVMCNLCTLACPELIQPNHLGLFVRRMIASL
CCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHH
TLRPANLMRRLREIERGDMTIDLDAPGAQPPH
CCCHHHHHHHHHHHHHCCEEEEECCCCCCCCC
>Mature Secondary Structure
MISLSIEGKQVEAPPNCSILQAFLHAGETLVEGVGCMGQGVCGSCRVLVRRAGKQEVITA
CEEECCCCCEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
LACETLIEDGMQVAFLDFFTSPARHVYRLEDIEDSWQALQAISDIFPEAADCRHCSGCDR
HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ACPKGLDVQRGVNLAVEGNLSEAGHVFDECVMCNLCTLACPELIQPNHLGLFVRRMIASL
CCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHH
TLRPANLMRRLREIERGDMTIDLDAPGAQPPH
CCCHHHHHHHHHHHHHCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA