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The map label for this gene is fimA [H]

Identifier: 94313176

GI number: 94313176

Start: 836642

End: 837169

Strand: Direct

Name: fimA [H]

Synonym: Rmet_4250

Alternate gene names: 94313176

Gene position: 836642-837169 (Clockwise)

Preceding gene: 291481523

Following gene: 94313177

Centisome position: 32.43

GC content: 62.5

Gene sequence:

>528_bases
ATGAAAAAACTCCTACTCTCCACGCTGGTTGTGTCCTCGCTCGGCCTAGCCTCGCAGTTTGCAGCCGCTGCCGACGGCAC
CATCACCTTCAACGGTCAGGTCACGTCCAATACCTGCACTATCAATGGCGGCACTCCTGACTTCACCGTCACGCTGCCGA
CCGTAGCGGCCGGTACCTTGAGCGCATCGGGCAATACCGCAGGCCGTACGTCGTTCAACATCGCGCTGACCAGCTGCACG
GGCAGTAGCGCACACACCTACTTCGAAGCGGGCCCGACGACCGATTCCGCAGGCCGCCTGATGCTGACCACCGGCAGTAC
CGCCTCCAACGTGCAGATCCAGCTGCTCAACGGCAGTGACCAGACGTTGGTCAAGGCCGGCTTTGCCGATGCGTCGCAGA
ACTCGCTATCGGCGAGCATCAGCGGGGGGTCGGCCACGCTGACGTACTACGCCGAGTACTACGCCACAGGCGCGGCCGGT
GCAGGGTCGGCCAACTCCAGCGTGATGTACACCATCGCCTACAACTAA

Upstream 100 bases:

>100_bases
CCGCGAAGAGCAGTTCCTTGGGGTACTGGATAGGTTGCCGCGATTGGACAGCTCCTTCTTCGCGCGGGCATTTCAAACTC
GTTGATCTTCATTCTCCAAC

Downstream 100 bases:

>100_bases
GCCGGAAACGGATGGCGGAATCTCACAGTTCTGCCATCCACCTGCTTTGGATTTGACCCTGTCTTCCTGAAATGATCATG
ACACGCACGCGGATGATTCG

Product: major type 1 subunit fimbrin (pilin)

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKKLLLSTLVVSSLGLASQFAAAADGTITFNGQVTSNTCTINGGTPDFTVTLPTVAAGTLSASGNTAGRTSFNIALTSCT
GSSAHTYFEAGPTTDSAGRLMLTTGSTASNVQIQLLNGSDQTLVKAGFADASQNSLSASISGGSATLTYYAEYYATGAAG
AGSANSSVMYTIAYN

Sequences:

>Translated_175_residues
MKKLLLSTLVVSSLGLASQFAAAADGTITFNGQVTSNTCTINGGTPDFTVTLPTVAAGTLSASGNTAGRTSFNIALTSCT
GSSAHTYFEAGPTTDSAGRLMLTTGSTASNVQIQLLNGSDQTLVKAGFADASQNSLSASISGGSATLTYYAEYYATGAAG
AGSANSSVMYTIAYN
>Mature_175_residues
MKKLLLSTLVVSSLGLASQFAAAADGTITFNGQVTSNTCTINGGTPDFTVTLPTVAAGTLSASGNTAGRTSFNIALTSCT
GSSAHTYFEAGPTTDSAGRLMLTTGSTASNVQIQLLNGSDQTLVKAGFADASQNSLSASISGGSATLTYYAEYYATGAAG
AGSANSSVMYTIAYN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17445; Mature: 17445

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLSTLVVSSLGLASQFAAAADGTITFNGQVTSNTCTINGGTPDFTVTLPTVAAGTL
CHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCEEECCEEEECCCCCCEEEEECCEEEEEE
SASGNTAGRTSFNIALTSCTGSSAHTYFEAGPTTDSAGRLMLTTGSTASNVQIQLLNGSD
ECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCC
QTLVKAGFADASQNSLSASISGGSATLTYYAEYYATGAAGAGSANSSVMYTIAYN
CEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKLLLSTLVVSSLGLASQFAAAADGTITFNGQVTSNTCTINGGTPDFTVTLPTVAAGTL
CHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCEEECCEEEECCCCCCEEEEECCEEEEEE
SASGNTAGRTSFNIALTSCTGSSAHTYFEAGPTTDSAGRLMLTTGSTASNVQIQLLNGSD
ECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCC
QTLVKAGFADASQNSLSASISGGSATLTYYAEYYATGAAGAGSANSSVMYTIAYN
CEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]