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The map label for this gene is pelF

Identifier: 94313087

GI number: 94313087

Start: 741378

End: 742967

Strand: Direct

Name: pelF

Synonym: Rmet_4160

Alternate gene names: NA

Gene position: 741378-742967 (Clockwise)

Preceding gene: 94313086

Following gene: 94313088

Centisome position: 28.73

GC content: 64.15

Gene sequence:

>1590_bases
ATGAGCGAGATTCTGGTCAAGGGAACGTCCGCGGACGTCATGCTGCTTCTGGAAGGCACGTTTCCTTATGTGAGTGGTGG
GGTGTCGAGCTGGGTCAATCAGATGATCCGTGCCTTCCCCGATATCCGGTTCGGCATCGTCTTCATCGGCAGCCGCCGAC
AGGACTATGGCGAGATGGCCTACGCGCTACCGGACAATGTGGTGCATCTGGAAACGCATTTCCTTTACGACTTCGCGCCG
CCGCCGATGGTGCATGGCACGAAGGGCGATGCGCACGCCTTCGACCGCTCGGACGAACTGCACGAAATGCTGCGTCAGCG
CGGCAGGGAGGTGGAGGCGGGGGATCTGATTCGCGAACTGATGCCAGCGCTGGGCGAGGGCGGCGCGCTGTCCGAGGATG
CGTTCCTCTACAGCAAGCGGGCGTGGGACACGATCACCGATCAGTACCGACGGTACTGCACCGATCCGTCGTTCACGGAC
TATTTCTGGACTGTCCGGATCATGCACAAGCCGCTGTGGCAGCTCGTGCGGATCGTGGACGGGCTGATTCCCGCCAAGGT
CTATCACACGGTTTCCACCGGATACGCGGGATTCCTCGGTGCGATGCTGCGGCATCGCACTGGGCGCCCGCTGCTGGTCT
CGGAGCACGGCATCTATACGAAGGAACGGAAGATCGACCTGTTCCAGAGCCAGTGGATCCGTGATAACCGGAACATCTTC
GAGCGCGACATTTCTCAGATTAGCTACTTCCGCGAGCTCTGGGTGCGCTTCTTCGAGACGTTGGGTCGCGTCTGCTATGA
AGCCGGTGACGAGATCACGGCGCTGTACGAAGGCAACCGCAGCCGCCAGGTGCTGGATGGCGCGCCGGCCGAGCGCACGC
ACAATATCCCGAATGGCATCAACCTGCCGCGCCTTTCCGCGCTGCGCGAGCGGCGCGCGCCGGGTGTGCCGCCGGTGCTG
TGCCTGATTGGCCGGGTGGTGCCCATCAAGGACATCAAGACGTTCATTCGCGCGATGCTGACCGTGGTGCGGGAGTATCC
CGATGCCGAAGGATGGATTGCCGGTCCCGAGGATGAGGATCCGGATTACGCGACTGAGTGTCGCAGCCTGGCCGAAAGCC
TCGGGCTGGGCGGCAAGGTGAAATTTCTCGGCTTCCAGAAAATCGACGAACTGCTGCCGAAAGTCGGCGTGCTGGTGCTG
AGTTCGATTTCCGAGGCGTTGCCGCTGGTGGTGCTCGAAGGGTTCGCGGCGGGTGTGCCGTGCGTGACGACCGACGTCGG
CTCGTGCAGCCAGCTCGTCTTCGGGCTGCCCGGCGAGGACGCGGCGCTGGGGACCGCGGGCGACGTGGTGCGCATCGCGG
ACCCGGCGGCGCTGGCCGATGCGGCGCTGAAACTGATCAAGGAGCCCGCGCGATGGCAGGCGGCCCAGGCCGCCGGCATC
GCGCGGGTGGAACGCTACTACACGCAGGAACAGATGGTGGGCAGCTATCGCACGCTCTATGCATCGATGATGGCGATGCC
GGACAACACGCATCACGCACGCGGCGGGGCAAGCCCGGCAAAGTGCCCGGTGCACGGGGGAGGGCGCTGA

Upstream 100 bases:

>100_bases
ACCTGGAACGCGACTATGCCACCGTGCGCCGCCTGATGGCGGATTTCGACAGTCCTTCGCCGCTCCCACTGGTGCGGCCC
TTGCTGCGGTACTGGCAATC

Downstream 100 bases:

>100_bases
CATGGCCGGCATCGGATTCGAACTGCGCAAGATGCTGCGGCGGGACAGCCTTTCGGGGCTGATCGGCGCCTATGCCTATG
CCGGGGTGATCAGCTCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipopolysaccharide Biosynthesis Protein-Related Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase I; Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide Glycosyltransferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; ABC Transporter Permease; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide N- Acetylglucosaminyltransferase; Lipopolysaccharide N-Acetylglucosaminyl Transferase; Glycosyl Transferase GT4 Family Protein

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSEILVKGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMAYALPDNVVHLETHFLYDFAP
PPMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGDLIRELMPALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTD
YFWTVRIMHKPLWQLVRIVDGLIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIF
ERDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGINLPRLSALRERRAPGVPPVL
CLIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDEDPDYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVL
SSISEALPLVVLEGFAAGVPCVTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGI
ARVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPVHGGGR

Sequences:

>Translated_529_residues
MSEILVKGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMAYALPDNVVHLETHFLYDFAP
PPMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGDLIRELMPALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTD
YFWTVRIMHKPLWQLVRIVDGLIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIF
ERDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGINLPRLSALRERRAPGVPPVL
CLIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDEDPDYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVL
SSISEALPLVVLEGFAAGVPCVTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGI
ARVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPVHGGGR
>Mature_528_residues
SEILVKGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMAYALPDNVVHLETHFLYDFAPP
PMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGDLIRELMPALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTDY
FWTVRIMHKPLWQLVRIVDGLIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIFE
RDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGINLPRLSALRERRAPGVPPVLC
LIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDEDPDYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVLS
SISEALPLVVLEGFAAGVPCVTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGIA
RVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPVHGGGR

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58755; Mature: 58624

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEILVKGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMA
CCCEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
YALPDNVVHLETHFLYDFAPPPMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGDLIREL
HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
MPALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTDYFWTVRIMHKPLWQLVRIVD
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIF
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
ERDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCHHCCCCCCCC
NLPRLSALRERRAPGVPPVLCLIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDED
CCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVLSSISEALPLVVLEGFAAGVP
CCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CVTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGI
EEECCCCCHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHH
ARVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPVHGGGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEILVKGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMA
CCEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
YALPDNVVHLETHFLYDFAPPPMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGDLIREL
HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
MPALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTDYFWTVRIMHKPLWQLVRIVD
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIF
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
ERDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCHHCCCCCCCC
NLPRLSALRERRAPGVPPVLCLIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDED
CCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVLSSISEALPLVVLEGFAAGVP
CCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CVTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGI
EEECCCCCHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHH
ARVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPVHGGGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA