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The map label for this gene is caiB [H]

Identifier: 94313026

GI number: 94313026

Start: 666581

End: 667816

Strand: Direct

Name: caiB [H]

Synonym: Rmet_4099

Alternate gene names: 94313026

Gene position: 666581-667816 (Clockwise)

Preceding gene: 94313025

Following gene: 291481514

Centisome position: 25.84

GC content: 65.7

Gene sequence:

>1236_bases
ATGCAAAAAATGGAAGCCAATAAGTTTCGCCCGCTGGCTGGCGTAAAAGTGCTTGAGTTGTCACAGATTCTGGCCGGCCC
CACCTGTGGGCTGATGCTTGGCGATCTCGGGGCCGACGTGGTCAAGATCGAGCGATTTCCCGCCGGGGACGACGCGCGGA
AGTACCGCCGGCAGGGCGACAGCGGATTGCCGCCTTCCTTCCTGATTGTCAATCGCGGCAAGCGGTCGCTCGGACTCGAC
CTGCGCAAGGAAGAGGGCAAGGCGGTGCTCAAGCGGATGGTTGCCCAGGCCGATGTGCTGACCGAGAACTTTCGTCTGGG
AGTGATGGAGAAACTGGGCCTTGGCTACGACGTGCTGCGCGAGGTGAATCCGGCCCTGATCTACTGCTCGATCACCGGAT
ACGGACGGACGGGGCCGCTCGCCAGCAAAGGTGGTTTCGACCTGATTCTGCAGGCGTTCTCGGGGCTCATCAGCGTGACA
GGAGAGCCCGGCCGCGACCCGGTCAAGCCGGGCATGTCGATCGCCGACGTCAATGCCGGCATCCTGGCCGCATTCGGTAT
CCTGGCGGCGTACATCAACCGGCTACGCACGGGCGAGGGCTCGCGCGTCGAGACCTCGCTGCTGCAGGCATCGATGCAGC
AGCTTTACTGGTACGCGGCGGCCTACTTCTCGACCGGGGCGATTGCGAAGCCGGTCGGCACGGCGCATCCGCTCATCGCG
CCTTACCAGGTGTATCAATGCGCTGATGGCGGTATCGCGCTCGGGGGCGCCAATCAGACCAACTGGGAGCGCATCGCCGA
TGTGCTGGGCCATCCGGAGTGGAAGGCCGATCCGCGTTTCGACAGCGCGGCGGAAAGACTCGCGCGCCGTGCCGAGCTCG
AACTGCTGATCACCGATGTCCTGAAGGGCGCGCCGGTGGCGACGTGGGTGGAGCGATTCGATGCCGTGGGGGTGCCTGTC
GGCCCGGTTCAGAACGTGGCGCAGGCACTGGAGCATCCGCAGGCGAAGGCAGTCGGGATGGTCGTGGAAGCCCGCAAGCC
AGGCGGCGGCATGACGCGCGCGCTGGGGCTACCCGTCCTGTTCGACGGGGGCAACGCCAGTTCGACCGGCCCGGCCCCCG
CGCTGGGCGAGCATTCCAGTTCAGTGCTGCGGGAGTTTGGATTTGCCGCGGGAGAGATCGAGGACCTGCTGCGCAACGCC
GTGGTCCACGACTGCGCTCATCCGGTCGCGGCGTGA

Upstream 100 bases:

>100_bases
TGGCGCTGGCCTGAATCGAGGTTCGCCTGCCGTCGAAATTTTGCCTTTTTGGTTTGAAATATTTTGGTGTACCATCCGCA
TACATTAACGTCGTCAACGT

Downstream 100 bases:

>100_bases
TGCGCGTGATGTGTTTACGGGCGACGTCCGCGGCCGACCGCCGCGCCATCGTCGGGCATCGCCGCGATCATGTCGGCATA
GACATTGCCGCCCGCGGAGA

Product: acyl-CoA transferase/L-carnitine dehydratase, CaiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MQKMEANKFRPLAGVKVLELSQILAGPTCGLMLGDLGADVVKIERFPAGDDARKYRRQGDSGLPPSFLIVNRGKRSLGLD
LRKEEGKAVLKRMVAQADVLTENFRLGVMEKLGLGYDVLREVNPALIYCSITGYGRTGPLASKGGFDLILQAFSGLISVT
GEPGRDPVKPGMSIADVNAGILAAFGILAAYINRLRTGEGSRVETSLLQASMQQLYWYAAAYFSTGAIAKPVGTAHPLIA
PYQVYQCADGGIALGGANQTNWERIADVLGHPEWKADPRFDSAAERLARRAELELLITDVLKGAPVATWVERFDAVGVPV
GPVQNVAQALEHPQAKAVGMVVEARKPGGGMTRALGLPVLFDGGNASSTGPAPALGEHSSSVLREFGFAAGEIEDLLRNA
VVHDCAHPVAA

Sequences:

>Translated_411_residues
MQKMEANKFRPLAGVKVLELSQILAGPTCGLMLGDLGADVVKIERFPAGDDARKYRRQGDSGLPPSFLIVNRGKRSLGLD
LRKEEGKAVLKRMVAQADVLTENFRLGVMEKLGLGYDVLREVNPALIYCSITGYGRTGPLASKGGFDLILQAFSGLISVT
GEPGRDPVKPGMSIADVNAGILAAFGILAAYINRLRTGEGSRVETSLLQASMQQLYWYAAAYFSTGAIAKPVGTAHPLIA
PYQVYQCADGGIALGGANQTNWERIADVLGHPEWKADPRFDSAAERLARRAELELLITDVLKGAPVATWVERFDAVGVPV
GPVQNVAQALEHPQAKAVGMVVEARKPGGGMTRALGLPVLFDGGNASSTGPAPALGEHSSSVLREFGFAAGEIEDLLRNA
VVHDCAHPVAA
>Mature_411_residues
MQKMEANKFRPLAGVKVLELSQILAGPTCGLMLGDLGADVVKIERFPAGDDARKYRRQGDSGLPPSFLIVNRGKRSLGLD
LRKEEGKAVLKRMVAQADVLTENFRLGVMEKLGLGYDVLREVNPALIYCSITGYGRTGPLASKGGFDLILQAFSGLISVT
GEPGRDPVKPGMSIADVNAGILAAFGILAAYINRLRTGEGSRVETSLLQASMQQLYWYAAAYFSTGAIAKPVGTAHPLIA
PYQVYQCADGGIALGGANQTNWERIADVLGHPEWKADPRFDSAAERLARRAELELLITDVLKGAPVATWVERFDAVGVPV
GPVQNVAQALEHPQAKAVGMVVEARKPGGGMTRALGLPVLFDGGNASSTGPAPALGEHSSSVLREFGFAAGEIEDLLRNA
VVHDCAHPVAA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=381, Percent_Identity=35.1706036745407, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI300863124, Length=407, Percent_Identity=32.9238329238329, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI300863126, Length=381, Percent_Identity=30.9711286089239, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13376042, Length=407, Percent_Identity=29.7297297297297, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI266456254, Length=398, Percent_Identity=30.1507537688442, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI42794625, Length=398, Percent_Identity=30.1507537688442, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI266458397, Length=209, Percent_Identity=37.3205741626794, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI266458393, Length=209, Percent_Identity=37.3205741626794, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=40.9722222222222, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=40.9722222222222, Blast_Score=105, Evalue=6e-23,
Organism=Escherichia coli, GI87082093, Length=377, Percent_Identity=35.8090185676393, Blast_Score=234, Evalue=6e-63,
Organism=Escherichia coli, GI1788717, Length=418, Percent_Identity=29.6650717703349, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1786222, Length=413, Percent_Identity=23.2445520581114, Blast_Score=99, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI115535051, Length=328, Percent_Identity=29.8780487804878, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=224, Percent_Identity=32.1428571428571, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24648431, Length=406, Percent_Identity=35.7142857142857, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24585488, Length=328, Percent_Identity=29.8780487804878, Blast_Score=131, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43578; Mature: 43578

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKMEANKFRPLAGVKVLELSQILAGPTCGLMLGDLGADVVKIERFPAGDDARKYRRQGD
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCC
SGLPPSFLIVNRGKRSLGLDLRKEEGKAVLKRMVAQADVLTENFRLGVMEKLGLGYDVLR
CCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EVNPALIYCSITGYGRTGPLASKGGFDLILQAFSGLISVTGEPGRDPVKPGMSIADVNAG
CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCHH
ILAAFGILAAYINRLRTGEGSRVETSLLQASMQQLYWYAAAYFSTGAIAKPVGTAHPLIA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PYQVYQCADGGIALGGANQTNWERIADVLGHPEWKADPRFDSAAERLARRAELELLITDV
CHHHEEECCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LKGAPVATWVERFDAVGVPVGPVQNVAQALEHPQAKAVGMVVEARKPGGGMTRALGLPVL
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCCCHHHHCCCEE
FDGGNASSTGPAPALGEHSSSVLREFGFAAGEIEDLLRNAVVHDCAHPVAA
ECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQKMEANKFRPLAGVKVLELSQILAGPTCGLMLGDLGADVVKIERFPAGDDARKYRRQGD
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCC
SGLPPSFLIVNRGKRSLGLDLRKEEGKAVLKRMVAQADVLTENFRLGVMEKLGLGYDVLR
CCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EVNPALIYCSITGYGRTGPLASKGGFDLILQAFSGLISVTGEPGRDPVKPGMSIADVNAG
CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCHH
ILAAFGILAAYINRLRTGEGSRVETSLLQASMQQLYWYAAAYFSTGAIAKPVGTAHPLIA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PYQVYQCADGGIALGGANQTNWERIADVLGHPEWKADPRFDSAAERLARRAELELLITDV
CHHHEEECCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LKGAPVATWVERFDAVGVPVGPVQNVAQALEHPQAKAVGMVVEARKPGGGMTRALGLPVL
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCCCHHHHCCCEE
FDGGNASSTGPAPALGEHSSSVLREFGFAAGEIEDLLRNAVVHDCAHPVAA
ECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]