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The map label for this gene is wrbA

Identifier: 94313023

GI number: 94313023

Start: 663839

End: 664438

Strand: Direct

Name: wrbA

Synonym: Rmet_4096

Alternate gene names: 94313023

Gene position: 663839-664438 (Clockwise)

Preceding gene: 94313022

Following gene: 94313025

Centisome position: 25.73

GC content: 64.17

Gene sequence:

>600_bases
ATGTCCAAGGTCCTGGTGCTGTATTACTCCACCTACGGGCACGTGGAAGCCCTGGCGGAGGCGGTCGCTGAAGGCGCTCG
CGCCACCGGCGCTACCGTCGACGTCAAGCGGGTACCGGAAACGGTGCCGGCGGCGGTAGCCGAGGCCTCCCACTTCAAGG
TCGACCAGAAAGCGCCGGTAGCCACGGTAGAGGATCTGGCTAACTACGACGCCATCGTGGTCGGCACACCAACGCGCTTC
GGGCGCATTTCCTCGCAGATGGCGGCGTTTCTCGATCAGGCCGGTGGCCTGTGGATGCGCGGCGTGCTGAACGGCAAGGT
CGGAGGCGCTTTCACGTCAACTGCCACTCAGCACGGCGGGCAGGAAGCCACGCTGTTCTCGATCATTGCCAACCTGCTGC
ACTTCGGCATGACCATCGTCGGTTTGCCGTACAGCCATCAAGGGCAGATGACGCTGGATGAAATCGTCGGCGGGTCGCCG
TATGGCGCGACGACCATTGCTGGCGGACAAGGGCAACGTCAGCCGAGCGCCATCGAACTCGAGGGTGCGCGCCACCAGGG
CGAACTGATCGCGAAGACCGCGAACAAGCTGTTCGGCTGA

Upstream 100 bases:

>100_bases
GAACTGCCTTGAGTCGTGGCGCGCCTGCCTCAAAAGGCTGGTGCTGCCGAATCCCTCCGGCGTTGCCGGAACCATAGAAA
CCTCATGAAGGAGTCTGCAA

Downstream 100 bases:

>100_bases
GGATGTGCATCGCTAGCTGAGCGGCCTGCCGGAGGCAGTCGGACAGGGGGGCGCCTTGCCGTGCGTCGCTTCCTTTTCGC
CCATGGCGGGAAGGAAGCGA

Product: NAD(P)H:quinone oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSKVLVLYYSTYGHVEALAEAVAEGARATGATVDVKRVPETVPAAVAEASHFKVDQKAPVATVEDLANYDAIVVGTPTRF
GRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGGQEATLFSIIANLLHFGMTIVGLPYSHQGQMTLDEIVGGSP
YGATTIAGGQGQRQPSAIELEGARHQGELIAKTANKLFG

Sequences:

>Translated_199_residues
MSKVLVLYYSTYGHVEALAEAVAEGARATGATVDVKRVPETVPAAVAEASHFKVDQKAPVATVEDLANYDAIVVGTPTRF
GRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGGQEATLFSIIANLLHFGMTIVGLPYSHQGQMTLDEIVGGSP
YGATTIAGGQGQRQPSAIELEGARHQGELIAKTANKLFG
>Mature_198_residues
SKVLVLYYSTYGHVEALAEAVAEGARATGATVDVKRVPETVPAAVAEASHFKVDQKAPVATVEDLANYDAIVVGTPTRFG
RISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGGQEATLFSIIANLLHFGMTIVGLPYSHQGQMTLDEIVGGSPY
GATTIAGGQGQRQPSAIELEGARHQGELIAKTANKLFG

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1787239, Length=200, Percent_Identity=57, Blast_Score=206, Evalue=9e-55,
Organism=Saccharomyces cerevisiae, GI6319849, Length=203, Percent_Identity=43.8423645320197, Blast_Score=164, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6320235, Length=199, Percent_Identity=43.21608040201, Blast_Score=154, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6319526, Length=201, Percent_Identity=29.3532338308458, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WRBA_RALME (Q1LFW3)

Other databases:

- EMBL:   CP000353
- RefSeq:   YP_586232.1
- ProteinModelPortal:   Q1LFW3
- SMR:   Q1LFW3
- STRING:   Q1LFW3
- GeneID:   4040954
- GenomeReviews:   CP000353_GR
- KEGG:   rme:Rmet_4096
- eggNOG:   COG0655
- HOGENOM:   HBG686708
- OMA:   PYSHQGQ
- PhylomeDB:   Q1LFW3
- ProtClustDB:   PRK03767
- BioCyc:   RMET266264:RMET_4096-MONOMER
- HAMAP:   MF_01017
- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025
- TIGRFAMs:   TIGR01755

Pfam domain/function: PF03358 FMN_red

EC number: NA

Molecular weight: Translated: 20745; Mature: 20614

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVLVLYYSTYGHVEALAEAVAEGARATGATVDVKRVPETVPAAVAEASHFKVDQKAPV
CCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCC
ATVEDLANYDAIVVGTPTRFGRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGG
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCHHHHCCC
QEATLFSIIANLLHFGMTIVGLPYSHQGQMTLDEIVGGSPYGATTIAGGQGQRQPSAIEL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCCCEEEECCCCCCCCCEEEE
EGARHQGELIAKTANKLFG
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SKVLVLYYSTYGHVEALAEAVAEGARATGATVDVKRVPETVPAAVAEASHFKVDQKAPV
CCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCC
ATVEDLANYDAIVVGTPTRFGRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGG
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCHHHHCCC
QEATLFSIIANLLHFGMTIVGLPYSHQGQMTLDEIVGGSPYGATTIAGGQGQRQPSAIEL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCCCEEEECCCCCCCCCEEEE
EGARHQGELIAKTANKLFG
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA